; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G2416 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2416
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description50S ribosomal protein L4
Genome locationctg1002:4785120..4786647
RNA-Seq ExpressionCucsat.G2416
SyntenyCucsat.G2416
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002136 - Ribosomal protein L4/L1e
IPR013005 - 50S ribosomal protein uL4
IPR023574 - Ribosomal protein L4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134779.1 uncharacterized protein LOC101223158 [Cucumis sativus]1.52e-219100Show/hide
Query:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL
        MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL
Subjt:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL

Query:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
        YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
Subjt:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
        FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD

Query:  AVERIVTRMHTPINR
        AVERIVTRMHTPINR
Subjt:  AVERIVTRMHTPINR

XP_008440040.1 PREDICTED: 50S ribosomal protein L4 [Cucumis melo]2.13e-20795.53Show/hide
Query:  ISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGLYQ
        ISVSRRLLRS+GSLSTFGQCNSSCTMS+SFSNPHEI G VSGSSSTFAS STLLKAG+FLASRGFC+SILTPESSNNAFPSELLSAKPVASEERKIGLYQ
Subjt:  ISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGLYQ

Query:  DLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFK
        DLMIPVTNF+NEDKGFM+LAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFK
Subjt:  DLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFK

Query:  LNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAV
        LNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKN+VKYV+ MENTKKVLLVDGGPI+EKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAV
Subjt:  LNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAV

Query:  ERIVTRMHTPINR
        ERIVTRMHTPINR
Subjt:  ERIVTRMHTPINR

XP_022950857.1 uncharacterized protein LOC111453831 [Cucurbita moschata]2.70e-18887.94Show/hide
Query:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL
        MAISVSRRLLRS+GSLSTFGQCNSSCTMS+SF N  EIYGHV GSSS FA  STLLKAG+FL S+G  TSILTPESSN         AKPV SEERKIGL
Subjt:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL

Query:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
         QDLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW+QKGTGRARHGTLRGPQFRGGA MHGPKPRSHA
Subjt:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
        FKLNKKVRRLGL IAL+AR AEGKLL+FDNLDV THKTK MV YV++MENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD

Query:  AVERIVTRMHTPINR
        AVERIVTRMHTPINR
Subjt:  AVERIVTRMHTPINR

XP_022978853.1 uncharacterized protein LOC111478684 [Cucurbita maxima]3.14e-18787.3Show/hide
Query:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL
        MAISVSRRLLRS+GSLSTFGQCNSSCTMS+SF N  EIYGHV GSSS FA  STLLKAG+FL S+G  TSILTPESSN         AKPV SEERKIGL
Subjt:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL

Query:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
         QDLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW+QKGTGRARHGTLRGPQFRGGA MHGPKPRSHA
Subjt:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
        FKLNKKVRRLGL IAL+AR AEGKLL+FDNLDV THKTK +V YV++MENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD

Query:  AVERIVTRMHTPINR
        AVE+IVTRMHTPINR
Subjt:  AVERIVTRMHTPINR

XP_038881662.1 50S ribosomal protein L4 [Benincasa hispida]1.57e-19690.48Show/hide
Query:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL
        MAISVSRRLLRS+ SLSTFGQCNS CTMS+SF N HEIYG V+GSSS FA  STLLKAGSFLASRGFC+SILTPESSN AFPS LLSAKPV  EERKIGL
Subjt:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL

Query:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
         QDLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW QKGTGRARHGTLRGPQFRGGA MHGPKPRSHA
Subjt:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
        FKLNKKVRRLGL IALSAR AEGKLL+FDNLDVTTHKTKN+VKYV+ MENTKK+LLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVY ILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD

Query:  AVERIVTRMHTPINR
        AVERIVTRMHTPI+R
Subjt:  AVERIVTRMHTPINR

TrEMBL top hitse value%identityAlignment
A0A0A0KH99 Uncharacterized protein7.38e-220100Show/hide
Query:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL
        MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL
Subjt:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL

Query:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
        YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
Subjt:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
        FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD

Query:  AVERIVTRMHTPINR
        AVERIVTRMHTPINR
Subjt:  AVERIVTRMHTPINR

A0A1S3B0T2 50S ribosomal protein L41.03e-20795.53Show/hide
Query:  ISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGLYQ
        ISVSRRLLRS+GSLSTFGQCNSSCTMS+SFSNPHEI G VSGSSSTFAS STLLKAG+FLASRGFC+SILTPESSNNAFPSELLSAKPVASEERKIGLYQ
Subjt:  ISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGLYQ

Query:  DLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFK
        DLMIPVTNF+NEDKGFM+LAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFK
Subjt:  DLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFK

Query:  LNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAV
        LNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKN+VKYV+ MENTKKVLLVDGGPI+EKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAV
Subjt:  LNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAV

Query:  ERIVTRMHTPINR
        ERIVTRMHTPINR
Subjt:  ERIVTRMHTPINR

A0A6J1BUE8 uncharacterized protein LOC111005636 isoform X18.60e-18786.03Show/hide
Query:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL
        MAI+VSRRLLRS+GS  TFGQCNSSC M++S  N HEIYG V+G SS FA  STLLKAG F AS+G  TSILTPESS  AFPS+LLSA PV  EERKIGL
Subjt:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL

Query:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
         QDLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW+QKGTGRARHGTLRGPQFRGGA MHGPKPRSHA
Subjt:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
        FKLNKKVRRLGL IALSAR AEGKLLVFDNLDV THKTKN+V Y ++ME  KK+LLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD

Query:  AVERIVTRMHTPINR
        A+ERIVTRMHTPINR
Subjt:  AVERIVTRMHTPINR

A0A6J1GH25 uncharacterized protein LOC1114538311.31e-18887.94Show/hide
Query:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL
        MAISVSRRLLRS+GSLSTFGQCNSSCTMS+SF N  EIYGHV GSSS FA  STLLKAG+FL S+G  TSILTPESSN         AKPV SEERKIGL
Subjt:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL

Query:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
         QDLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW+QKGTGRARHGTLRGPQFRGGA MHGPKPRSHA
Subjt:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
        FKLNKKVRRLGL IAL+AR AEGKLL+FDNLDV THKTK MV YV++MENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD

Query:  AVERIVTRMHTPINR
        AVERIVTRMHTPINR
Subjt:  AVERIVTRMHTPINR

A0A6J1IUG2 uncharacterized protein LOC1114786841.52e-18787.3Show/hide
Query:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL
        MAISVSRRLLRS+GSLSTFGQCNSSCTMS+SF N  EIYGHV GSSS FA  STLLKAG+FL S+G  TSILTPESSN         AKPV SEERKIGL
Subjt:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGL

Query:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
         QDLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW+QKGTGRARHGTLRGPQFRGGA MHGPKPRSHA
Subjt:  YQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
        FKLNKKVRRLGL IAL+AR AEGKLL+FDNLDV THKTK +V YV++MENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD

Query:  AVERIVTRMHTPINR
        AVE+IVTRMHTPINR
Subjt:  AVERIVTRMHTPINR

SwissProt top hitse value%identityAlignment
A8GVB5 50S ribosomal protein L42.2e-4649.75Show/hide
Query:  VTNFENEDKGFMVLAGDVFDLP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKK
        + N  NE+ G + L  D+F +  IR DII +VV WQ AK   GTH TKT+SEVSGT +KP+KQKGTG AR G+LR  Q RGG  +HGP  RSHA KL KK
Subjt:  VTNFENEDKGFMVLAGDVFDLP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKK

Query:  VRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIV
        VR+LGL+ ALS + +EGKLLV D+L + T KT N+V  ++K +  K   ++DG  +D    LA QN++   V+P IG NVY I+ H+ +++S++AV  + 
Subjt:  VRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIV

Query:  TRM
         R+
Subjt:  TRM

B6IRQ7 50S ribosomal protein L41.2e-4951.49Show/hide
Query:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV
        V N  NE  G + LA +VF LP R+DI+ R+V WQLAKR+QGTH TK ISE++GT +KPW+QKGTGRAR G+ R PQFRGGA + GP  RSH   L KKV
Subjt:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV

Query:  RRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVT
        R+L L  ALS + AEGKL V +     THKTK +   +  +  T   L++DG  +DE    A +N+ +++VLP  G NVY IL  D LV++R+AVE++  
Subjt:  RRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVT

Query:  RM
        R+
Subjt:  RM

Q1RHM2 50S ribosomal protein L42.2e-4649.75Show/hide
Query:  VTNFENEDKGFMVLAGDVFDLP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKK
        + N  NE+ G + L  D+F +  IR DII +VV WQ AK   GTH TKT+SEVSGT +KP+KQKGTG AR G+LR  Q RGG  +HGP  RSHA KL KK
Subjt:  VTNFENEDKGFMVLAGDVFDLP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKK

Query:  VRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIV
        VR+LGL+ ALS + +EGKLLV D+L + T KT N+V  ++K +  K   ++DG  +D    LA QN++   V+P IG NVY I+ H+ +++S++AV  + 
Subjt:  VRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIV

Query:  TRM
         R+
Subjt:  TRM

Q2RQW1 50S ribosomal protein L47.3e-5051.49Show/hide
Query:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV
        V   + +D G + L+  VF LP+R D++HR+VRWQLA+RQ GTH TK ISE+SGT  KP+KQKGTG AR G+ R PQFRGGAT+ GP  RSHA  LNKKV
Subjt:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV

Query:  RRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVT
        R+LGL  ALSA+   G+L+V D     + KTK+++  + K+   +KVL +DG  ++EK  LA +N+  ++VLP  G NVY IL  DTLV++++AV+ +  
Subjt:  RRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVT

Query:  RM
        R+
Subjt:  RM

Q2W2J2 50S ribosomal protein L43.6e-4950.99Show/hide
Query:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV
        V + +N+  G + LA ++F +P+R DI+ R V WQLAKRQ G H TKTISE+SGT +KP+ QKG GRAR G+LR  QFRGG+T+ GP  RSHA  L KKV
Subjt:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV

Query:  RRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVT
        R+L L  ALSA+VA+GKL+V D     + KTK++   + K+     VL +DG  +D    LA++N+ YV+VLP+ G NVY IL  DTLV+++DAV  +  
Subjt:  RRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVT

Query:  RM
        R+
Subjt:  RM

Arabidopsis top hitse value%identityAlignment
AT1G07320.1 ribosomal protein L45.2e-1929.37Show/hide
Query:  ASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVAS--EERKIGLYQDL-MIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKR
        AS +T   + SF +S  F        SS++  P   +S   + S    + + +   L  +P+ +FE E  G   L          + ++HR +   L  +
Subjt:  ASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVAS--EERKIGLYQDL-MIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKR

Query:  QQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIAL-SARVAEGKLLVFDNLDVTTHKTKN-----
        ++GT ST T  EV G G KP+ QK TG AR G+ R P   GG  + GP+P+  + K+N+K ++L +  AL SA  AEG  +V +       K K      
Subjt:  QQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIAL-SARVAEGKLLVFDNLDVTTHKTKN-----

Query:  -MVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTR
         M ++    +     L++D   +DE +  +++N+  + +L    LN++ IL  D LV++  AVE +  R
Subjt:  -MVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTR

AT1G07320.2 ribosomal protein L45.2e-1929.37Show/hide
Query:  ASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVAS--EERKIGLYQDL-MIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKR
        AS +T   + SF +S  F        SS++  P   +S   + S    + + +   L  +P+ +FE E  G   L          + ++HR +   L  +
Subjt:  ASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVAS--EERKIGLYQDL-MIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKR

Query:  QQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIAL-SARVAEGKLLVFDNLDVTTHKTKN-----
        ++GT ST T  EV G G KP+ QK TG AR G+ R P   GG  + GP+P+  + K+N+K ++L +  AL SA  AEG  +V +       K K      
Subjt:  QQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIAL-SARVAEGKLLVFDNLDVTTHKTKN-----

Query:  -MVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTR
         M ++    +     L++D   +DE +  +++N+  + +L    LN++ IL  D LV++  AVE +  R
Subjt:  -MVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTR

AT1G07320.3 ribosomal protein L45.2e-1929.37Show/hide
Query:  ASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVAS--EERKIGLYQDL-MIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKR
        AS +T   + SF +S  F        SS++  P   +S   + S    + + +   L  +P+ +FE E  G   L          + ++HR +   L  +
Subjt:  ASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVAS--EERKIGLYQDL-MIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKR

Query:  QQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIAL-SARVAEGKLLVFDNLDVTTHKTKN-----
        ++GT ST T  EV G G KP+ QK TG AR G+ R P   GG  + GP+P+  + K+N+K ++L +  AL SA  AEG  +V +       K K      
Subjt:  QQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIAL-SARVAEGKLLVFDNLDVTTHKTKN-----

Query:  -MVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTR
         M ++    +     L++D   +DE +  +++N+  + +L    LN++ IL  D LV++  AVE +  R
Subjt:  -MVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTR

AT1G07320.4 ribosomal protein L45.2e-1929.37Show/hide
Query:  ASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVAS--EERKIGLYQDL-MIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKR
        AS +T   + SF +S  F        SS++  P   +S   + S    + + +   L  +P+ +FE E  G   L          + ++HR +   L  +
Subjt:  ASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVAS--EERKIGLYQDL-MIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKR

Query:  QQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIAL-SARVAEGKLLVFDNLDVTTHKTKN-----
        ++GT ST T  EV G G KP+ QK TG AR G+ R P   GG  + GP+P+  + K+N+K ++L +  AL SA  AEG  +V +       K K      
Subjt:  QQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIAL-SARVAEGKLLVFDNLDVTTHKTKN-----

Query:  -MVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTR
         M ++    +     L++D   +DE +  +++N+  + +L    LN++ IL  D LV++  AVE +  R
Subjt:  -MVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTR

AT2G20060.1 Ribosomal protein L4/L1 family9.3e-11769.94Show/hide
Query:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAG-SFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIG
        MA S+SRR+ R+ GS S  G+ +S             +  + SG+    AS +  LK G + L++R   TSILTP+ S   FPS+LL+ K V + +R IG
Subjt:  MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAG-SFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIG

Query:  LYQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSH
         YQDL+IPVTNF+NE+KGFMVLAGDVFD+PIRKDIIH VVRWQLAKRQQGTHSTKT+SEVSGTGRKPW QKGTGRARHGTLRGPQFRGG  MHGPKPRSH
Subjt:  LYQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSH

Query:  AFKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSR
        A K+NK+VRRLGL IAL+AR AEGKLLVFD+L + THKTKN+V Y ++MENTKKVL+V+GGPIDEKLKLATQNLHYVN++PSIGLNVYSILLHDTL+MSR
Subjt:  AFKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSR

Query:  DAVERIVTRMHTPINR
        DAV +IV RMHTPINR
Subjt:  DAVERIVTRMHTPINR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATCTCAGTTTCGAGAAGGCTGCTGCGCTCTGTGGGGTCCTTATCAACGTTTGGACAATGTAATTCTTCATGTACTATGAGTCGGTCATTTTCTAATCCCCATGA
AATTTATGGCCATGTTAGTGGGAGTAGCTCTACGTTTGCAAGCCGTTCTACTCTTTTGAAGGCTGGATCCTTTCTTGCTTCCCGAGGGTTTTGCACCTCAATTTTGACTC
CTGAATCAAGCAATAATGCATTTCCTTCTGAGTTACTGTCTGCTAAGCCGGTGGCATCCGAAGAGCGCAAGATAGGGCTTTATCAGGACCTGATGATTCCTGTGACAAAC
TTTGAAAATGAAGACAAAGGCTTCATGGTCTTGGCTGGAGATGTTTTTGACCTTCCAATCAGGAAGGACATCATTCATCGGGTTGTTAGATGGCAGCTTGCAAAGAGACA
GCAGGGAACACATTCGACAAAAACAATTAGTGAGGTTAGCGGAACAGGGAGAAAGCCATGGAAACAAAAAGGTACTGGGAGAGCAAGACATGGAACATTGCGTGGTCCCC
AGTTCAGAGGTGGTGCAACTATGCATGGACCCAAACCACGAAGTCATGCCTTTAAGCTTAATAAGAAAGTTCGTCGCTTGGGTTTGATGATTGCTCTTTCAGCTCGTGTT
GCAGAAGGAAAGCTTCTGGTATTTGATAATTTGGACGTCACTACGCATAAGACGAAGAATATGGTGAAATATGTCAGTAAAATGGAGAATACCAAAAAAGTATTACTAGT
TGATGGTGGTCCCATAGATGAGAAGCTGAAGTTGGCCACGCAAAACCTTCATTATGTCAACGTTTTGCCATCTATTGGTTTGAATGTTTACAGCATTCTTCTACACGATA
CTCTTGTGATGTCTCGTGATGCTGTAGAAAGAATTGTTACCCGGATGCACACTCCAATCAACCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATCTCAGTTTCGAGAAGGCTGCTGCGCTCTGTGGGGTCCTTATCAACGTTTGGACAATGTAATTCTTCATGTACTATGAGTCGGTCATTTTCTAATCCCCATGA
AATTTATGGCCATGTTAGTGGGAGTAGCTCTACGTTTGCAAGCCGTTCTACTCTTTTGAAGGCTGGATCCTTTCTTGCTTCCCGAGGGTTTTGCACCTCAATTTTGACTC
CTGAATCAAGCAATAATGCATTTCCTTCTGAGTTACTGTCTGCTAAGCCGGTGGCATCCGAAGAGCGCAAGATAGGGCTTTATCAGGACCTGATGATTCCTGTGACAAAC
TTTGAAAATGAAGACAAAGGCTTCATGGTCTTGGCTGGAGATGTTTTTGACCTTCCAATCAGGAAGGACATCATTCATCGGGTTGTTAGATGGCAGCTTGCAAAGAGACA
GCAGGGAACACATTCGACAAAAACAATTAGTGAGGTTAGCGGAACAGGGAGAAAGCCATGGAAACAAAAAGGTACTGGGAGAGCAAGACATGGAACATTGCGTGGTCCCC
AGTTCAGAGGTGGTGCAACTATGCATGGACCCAAACCACGAAGTCATGCCTTTAAGCTTAATAAGAAAGTTCGTCGCTTGGGTTTGATGATTGCTCTTTCAGCTCGTGTT
GCAGAAGGAAAGCTTCTGGTATTTGATAATTTGGACGTCACTACGCATAAGACGAAGAATATGGTGAAATATGTCAGTAAAATGGAGAATACCAAAAAAGTATTACTAGT
TGATGGTGGTCCCATAGATGAGAAGCTGAAGTTGGCCACGCAAAACCTTCATTATGTCAACGTTTTGCCATCTATTGGTTTGAATGTTTACAGCATTCTTCTACACGATA
CTCTTGTGATGTCTCGTGATGCTGTAGAAAGAATTGTTACCCGGATGCACACTCCAATCAACCGCTGA
Protein sequenceShow/hide protein sequence
MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGLYQDLMIPVTN
FENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIALSARV
AEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTRMHTPINR