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Cucsat.G2448 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2448
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionCHCH domain-containing protein
Genome locationctg1002:5209110..5209797
RNA-Seq ExpressionCucsat.G2448
SyntenyCucsat.G2448
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134733.1 uncharacterized protein LOC101211873 [Cucumis sativus]2.34e-100100Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFSHTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
        MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFSHTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFSHTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_022949732.1 uncharacterized protein LOC111453037 [Cucurbita moschata]6.38e-6878.23Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---HTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLK
        MISLKPS HHNG  +SF  NSS   Q   PI R  + NF     TKTTFR  A+ + SG G Q+RTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLLK
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---HTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLK

Query:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_022977984.1 uncharacterized protein LOC111478111 [Cucurbita maxima]3.88e-6978.77Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQ--NPIPIIRITKPNFSHTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKV
        MISLKPS HHNG  +SF  NSS   Q  NPI  +R   P    TKTTFR  A+ + SG G Q+RTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLLKV
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQ--NPIPIIRITKPNFSHTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKV

Query:  IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_023544671.1 uncharacterized protein LOC111804184 [Cucurbita pepo subsp. pepo]3.17e-6877.55Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---HTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLK
        MISLKPS HHNG  +SF +NSS   Q   PI R  + NF     TKTTF+  A+ + SG G Q+RTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLLK
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---HTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLK

Query:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_038881387.1 uncharacterized protein LOC120072922 [Benincasa hispida]5.79e-7482.55Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---HTKTT-FRTHAQPSGS-GKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNL
        MISL PSTHHNG  +SF YNSS  QQN IP I   KPNF+   HTKTT FRT A+ +GS G G Q+RTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNL
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---HTKTT-FRTHAQPSGS-GKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNL

Query:  LKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        L+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  LKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

TrEMBL top hitse value%identityAlignment
A0A0A0KHI4 Uncharacterized protein1.13e-100100Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFSHTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
        MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFSHTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFSHTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A5C7GRM7 Uncharacterized protein2.15e-4861.33Show/hide
Query:  MISLKPSTHHNGFDTSFPYNS-SKFQQNPIPIIRITKPNFSHT-----KTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLN
        MISLKP      +  SF  N+ SK Q+    +I  T+ NF  +     K T R      G  K  +KR+FLT+EEAGLVE+SGL+THERFLCRLTISSLN
Subjt:  MISLKPSTHHNGFDTSFPYNS-SKFQQNPIPIIRITKPNFSHT-----KTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLN

Query:  LLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        LL+VI+E+E CSIEELNAGR+CDWFLKDKLKREQN+DSAVLQWDDS+  F
Subjt:  LLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1CKG5 uncharacterized protein LOC1110124321.67e-5465.81Show/hide
Query:  MISLKPSTHHNGFDTSFP-YNSSKFQQNPIPI----------IRITKPNFSHTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLT
        MISL P  + NG  +SFP Y+S+     PIP           I + K NF      FR        G   Q+RTFLT+EEAGLVEVSGLSTHERFLCRLT
Subjt:  MISLKPSTHHNGFDTSFP-YNSSKFQQNPIPI----------IRITKPNFSHTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLT

Query:  ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        ISSLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1GCY7 uncharacterized protein LOC1114530373.09e-6878.23Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---HTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLK
        MISLKPS HHNG  +SF  NSS   Q   PI R  + NF     TKTTFR  A+ + SG G Q+RTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLLK
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---HTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLK

Query:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1ISV2 uncharacterized protein LOC1114781111.88e-6978.77Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQ--NPIPIIRITKPNFSHTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKV
        MISLKPS HHNG  +SF  NSS   Q  NPI  +R   P    TKTTFR  A+ + SG G Q+RTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLLKV
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQ--NPIPIIRITKPNFSHTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKV

Query:  IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21445.1 unknown protein6.1e-3465.66Show/hide
Query:  KTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD
        + +  T  + S     P++R+FL++ EAGLVE+SGL  HE+FLCRLTISSLNLL+VI+E+E CSIEELNAG++CDWFLKDKLKRE N++SAVLQWDD D
Subjt:  KTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACGCCAAAGAGGAAGGGAACAGGGAAAAAAAAAATACAAATGCACATTCTCATTTATCCCTTTACTCCATCCCCCACCACATAAAAGCAGTAGCCGATAACCCCCTGCA
TCATCTTCCTCCTTCCACACCATTCTTTCACTTCAACAATCAACAAGAAATGATCTCACTCAAACCCTCCACTCACCACAACGGATTTGATACTTCATTCCCTTACAATT
CTTCAAAATTTCAACAAAACCCCATTCCAATCATTAGAATAACTAAGCCCAATTTCTCACATACCAAAACAACCTTCAGAACCCACGCCCAGCCGTCCGGATCAGGCAAA
GGCCCTCAAAAACGGACTTTCCTGACCATCGAAGAAGCCGGCCTCGTAGAAGTATCCGGCCTCAGCACCCACGAAAGATTTCTCTGCCGTTTAACCATATCTTCTCTGAA
TTTACTGAAAGTGATAGCGGAGGAAGAGAAATGCTCGATTGAAGAGTTGAATGCGGGAAGATTATGCGATTGGTTTCTCAAGGATAAGTTGAAAAGAGAGCAGAATTTGG
ATTCTGCTGTTCTTCAATGGGATGATTCTGATCCTCTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
AACGCCAAAGAGGAAGGGAACAGGGAAAAAAAAAATACAAATGCACATTCTCATTTATCCCTTTACTCCATCCCCCACCACATAAAAGCAGTAGCCGATAACCCCCTGCA
TCATCTTCCTCCTTCCACACCATTCTTTCACTTCAACAATCAACAAGAAATGATCTCACTCAAACCCTCCACTCACCACAACGGATTTGATACTTCATTCCCTTACAATT
CTTCAAAATTTCAACAAAACCCCATTCCAATCATTAGAATAACTAAGCCCAATTTCTCACATACCAAAACAACCTTCAGAACCCACGCCCAGCCGTCCGGATCAGGCAAA
GGCCCTCAAAAACGGACTTTCCTGACCATCGAAGAAGCCGGCCTCGTAGAAGTATCCGGCCTCAGCACCCACGAAAGATTTCTCTGCCGTTTAACCATATCTTCTCTGAA
TTTACTGAAAGTGATAGCGGAGGAAGAGAAATGCTCGATTGAAGAGTTGAATGCGGGAAGATTATGCGATTGGTTTCTCAAGGATAAGTTGAAAAGAGAGCAGAATTTGG
ATTCTGCTGTTCTTCAATGGGATGATTCTGATCCTCTTTTCTGA
Protein sequenceShow/hide protein sequence
NAKEEGNREKKNTNAHSHLSLYSIPHHIKAVADNPLHHLPPSTPFFHFNNQQEMISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFSHTKTTFRTHAQPSGSGK
GPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF