; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G2471 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2471
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionSquamosa promoter-binding-like protein
Genome locationctg1002:5537401..5539539
RNA-Seq ExpressionCucsat.G2471
SyntenyCucsat.G2471
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026565.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.14e-6369.44Show/hide
Query:  MANSEDQGW----EDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRF
        M +S DQGW    E+   +++DDD+D++EIGFV +ER++R+  + +R G GGGR++V RCQAD CN DL GA+ YHRRHKVCEFHS+AAVVILAGLEQRF
Subjt:  MANSEDQGW----EDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRF

Query:  CQQCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSST
        CQQCSRFH++SEFD+TKRSCR RLAGHNERRRK LPDF GQSST
Subjt:  CQQCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSST

XP_004134953.1 squamosa promoter-binding protein 1 [Cucumis sativus]4.10e-97100Show/hide
Query:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC
        MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC
Subjt:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC

Query:  SRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN
        SRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN
Subjt:  SRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN

XP_008439842.1 PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo]1.72e-8790.14Show/hide
Query:  MANSEDQGWEDMIVDDDDDD-NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQ
        MANS D  WEDMI+DDDDDD ND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQADGCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIVDDDDDD-NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQ

Query:  CSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN
        CSRFHA+SEFDDTKRSCR RLAGHNERRRKILPDFHGQSSTN
Subjt:  CSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN

XP_023004048.1 squamosa promoter-binding-like protein 3 [Cucurbita maxima]1.21e-6469.72Show/hide
Query:  MANSEDQGWEDMIVDDDDDD--NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQ
        M NS DQGW D + ++++++  +D++E+GFV++ER++R+ ++S+R G GGGR++VARCQAD CN DL GA+ YHRRHKVCEFHS+AAVVILAGLEQRFCQ
Subjt:  MANSEDQGWEDMIVDDDDDD--NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQ

Query:  QCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSST
        QCSRFH++SEFD+TKRSCR RLAGHNERRRK LPDF GQSST
Subjt:  QCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSST

XP_038880830.1 squamosa promoter-binding protein 1-like [Benincasa hispida]3.62e-8285.11Show/hide
Query:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC
        M NSEDQ WEDM+V++DDD++DNEEIGFV++ERRRRS LT  RGG GGGR TVARCQADGCNADL+ A+PYHRRHKVCEFH++AAVVILAGLEQRFCQQC
Subjt:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC

Query:  SRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN
        SRFHA+SEFDDTKRSCR RLAGHNERRRKILPDFHGQSSTN
Subjt:  SRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN

TrEMBL top hitse value%identityAlignment
A0A0A0KK74 SBP-type domain-containing protein1.98e-97100Show/hide
Query:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC
        MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC
Subjt:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC

Query:  SRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN
        SRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN
Subjt:  SRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN

A0A1S3AZN8 squamosa promoter-binding protein 18.33e-8890.14Show/hide
Query:  MANSEDQGWEDMIVDDDDDD-NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQ
        MANS D  WEDMI+DDDDDD ND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQADGCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIVDDDDDD-NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQ

Query:  CSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN
        CSRFHA+SEFDDTKRSCR RLAGHNERRRKILPDFHGQSSTN
Subjt:  CSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN

A0A5A7UDV9 Squamosa promoter-binding protein 12.51e-5888.35Show/hide
Query:  MANSEDQGWEDMIVDDDDDD-NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQ
        MANS D  WEDMI+DDDDDD ND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQADGCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIVDDDDDD-NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQ

Query:  CSR
        CSR
Subjt:  CSR

A0A6J1EFR3 Squamosa promoter-binding-like protein4.91e-6268.06Show/hide
Query:  MANSEDQGW----EDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRF
        M +S DQGW    E+   +++++D+D++EIGFV +ER++R+  + +R G GGGR++V RCQAD CN DL GA+ YHRRHKVCEFHS+AAVVILAGLEQRF
Subjt:  MANSEDQGW----EDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRF

Query:  CQQCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSST
        CQQCSRFH++SEFD+TKRSCR RLAGHNERRRK LPDF GQSST
Subjt:  CQQCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSST

A0A6J1KYC6 Squamosa promoter-binding-like protein5.88e-6569.72Show/hide
Query:  MANSEDQGWEDMIVDDDDDD--NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQ
        M NS DQGW D + ++++++  +D++E+GFV++ER++R+ ++S+R G GGGR++VARCQAD CN DL GA+ YHRRHKVCEFHS+AAVVILAGLEQRFCQ
Subjt:  MANSEDQGWEDMIVDDDDDD--NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQ

Query:  QCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSST
        QCSRFH++SEFD+TKRSCR RLAGHNERRRK LPDF GQSST
Subjt:  QCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSST

SwissProt top hitse value%identityAlignment
A2YFT9 Squamosa promoter-binding-like protein 101.6e-2868.24Show/hide
Query:  GGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRK
        G GG      RCQA+GC ADL+GAK YHRRHKVCE+H++A+VV  +G +QRFCQQCSRFH L+EFD+ KRSCR RLA HN RRRK
Subjt:  GGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRK

Q0DAE8 Squamosa promoter-binding-like protein 101.6e-2868.24Show/hide
Query:  GGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRK
        G GG      RCQA+GC ADL+GAK YHRRHKVCE+H++A+VV  +G +QRFCQQCSRFH L+EFD+ KRSCR RLA HN RRRK
Subjt:  GGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRK

Q0E3F8 Squamosa promoter-binding-like protein 51.2e-2869.41Show/hide
Query:  RCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSS
        RCQA+GC ADL+ AK YHRRHKVC+FH++AA V+ AG +QRFCQQCSRFH L+EFD+ KRSCR RL  HN RRRK  P   GQSS
Subjt:  RCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSS

Q38741 Squamosa promoter-binding protein 14.1e-2951.85Show/hide
Query:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC
        +  S++QG E     +DD   D+++   +    +R SG            ST   CQ + C A++T AKPYHRRHKVCEFH++A VV+ +GL+QRFCQQC
Subjt:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC

Query:  SRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFH
        SRFH LSEFD+ KRSCR RLAGHNERRRK   D H
Subjt:  SRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFH

Q8GXL3 Squamosa promoter-binding-like protein 82.7e-2865.98Show/hide
Query:  RRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRK
        RR R G       G     +  RCQA+GCNADL+ AK YHRRHKVCEFHS+A+ V+ AGL QRFCQQCSRFH LSEFD+ KRSCR RLA HN RRRK
Subjt:  RRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRK

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 81.9e-2965.98Show/hide
Query:  RRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRK
        RR R G       G     +  RCQA+GCNADL+ AK YHRRHKVCEFHS+A+ V+ AGL QRFCQQCSRFH LSEFD+ KRSCR RLA HN RRRK
Subjt:  RRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRK

AT1G69170.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein1.8e-2755.56Show/hide
Query:  VDDDDDDNDNEEIGF-VDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDT
        +D  +DD+D    GF + +++ R S L S              CQ  GC+ DL+ +K YH+RH+VCE HS+ +VVI+ GLEQRFCQQCSRFH LSEFDD 
Subjt:  VDDDDDDNDNEEIGF-VDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDT

Query:  KRSCRMRLAGHNERRRK
        KRSCR RLAGHNERRRK
Subjt:  KRSCRMRLAGHNERRRK

AT1G76580.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein2.8e-2857.14Show/hide
Query:  VDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRR
        VD  R  +   + + G GGGG     +CQ D C  DL+ AK YHRRHKVCE HS+A   ++    QRFCQQCSRFH LSEFD+ KRSCR RL GHN RRR
Subjt:  VDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRR

Query:  KILPD
        K  PD
Subjt:  KILPD

AT2G42200.1 squamosa promoter binding protein-like 92.1e-2864.44Show/hide
Query:  RGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRKILP
        RGGG G    + RCQ +GC  DLT AK Y+ RH+VC  HS+   V +AG+EQRFCQQCSRFH L EFD  KRSCR RLAGHNERRRK  P
Subjt:  RGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRKILP

AT3G60030.1 squamosa promoter-binding protein-like 122.5e-2961.05Show/hide
Query:  GGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSST
        GGG  S    CQ D C ADL+  K YHRRHKVCE HS+A   ++ G+ QRFCQQCSRFH L EFD+ KRSCR RLAGHN+RRRK  PD  G  ++
Subjt:  GGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTCAGAAGATCAAGGTTGGGAGGACATGATTGTAGATGATGACGACGACGATAACGACAACGAAGAAATAGGGTTTGTAGATAATGAGAGGAGGAGGAGATC
TGGTTTAACCAGTGCTCGGGGTGGTGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACCGGTGCAAAACCGTACCACCGCC
GCCACAAGGTCTGCGAGTTCCACTCCAGGGCGGCTGTGGTGATTCTGGCCGGATTGGAACAGCGATTTTGCCAGCAGTGTAGTAGGTTTCATGCATTATCGGAATTCGAT
GACACAAAGAGAAGCTGCCGGATGCGTTTGGCTGGTCACAATGAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCCACTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACTCAGAAGATCAAGGTTGGGAGGACATGATTGTAGATGATGACGACGACGATAACGACAACGAAGAAATAGGGTTTGTAGATAATGAGAGGAGGAGGAGATC
TGGTTTAACCAGTGCTCGGGGTGGTGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACCGGTGCAAAACCGTACCACCGCC
GCCACAAGGTCTGCGAGTTCCACTCCAGGGCGGCTGTGGTGATTCTGGCCGGATTGGAACAGCGATTTTGCCAGCAGTGTAGTAGGTTTCATGCATTATCGGAATTCGAT
GACACAAAGAGAAGCTGCCGGATGCGTTTGGCTGGTCACAATGAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCCACTAATTGA
Protein sequenceShow/hide protein sequence
MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFD
DTKRSCRMRLAGHNERRRKILPDFHGQSSTN