CuGenDBv2

Gene ID	Cucsat.G2504
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	cyclic phosphodiesterase-like
Genome location	ctg1002:6034689..6036809
RNA-Seq Expression	Cucsat.G2504
Synteny	Cucsat.G2504
Gene Ontology terms	GO:0009187 - cyclic nucleotide metabolic process (biological process) GO:0004113 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (molecular function)
InterPro domains	IPR009097 - Cyclic phosphodiesterase IPR012386 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052590.1 cyclic phosphodiesterase-like [Cucumis melo var. makuwa]

3.74e-109

73.71

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Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIRLTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR
        IHPTTEVLPSH SALP RLL                                             YMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+
Subjt:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR

Query:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS
        FPITRLAL KTDT+DETLKSW+KIVEHDLSSS
Subjt:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS

XP_004134643.1 cyclic phosphodiesterase [Cucumis sativus]

5.54e-128

82.76

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Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR
        IHPTTEV                                        VETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR
Subjt:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR

Query:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS
        FPITRLALCKTDTADETLKSWDKIVEHDLSSS
Subjt:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS

XP_008439703.1 PREDICTED: cyclic phosphodiesterase-like [Cucumis melo]

1.21e-115

75.86

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Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIRLTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR
        IHPTTEV                                        VETSSHFCKHF FK+STPYMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+
Subjt:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR

Query:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS
        FPITRLAL KTDT+DETLKSW+KIVEHDLSSS
Subjt:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS

XP_023543945.1 cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo]

9.19e-97

65.09

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Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M NPES  IQ  E E +VYSVWALPPEDV+ARI  LM SLRSEFGGP FEPHITVVGAIRLT +DAL KFR+AC+G+KAYQATVD V+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR
        IHPTT                                        QVVETSSH C HF +K+STPYMPH+SLLY++ISDE++KQAKE+A+KLDEA+NGL 
Subjt:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR

Query:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS
        FPITRLAL KTDT DETLKSW+KI E DL SS
Subjt:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS

XP_038882567.1 cyclic phosphodiesterase-like [Benincasa hispida]

2.15e-102

68.53

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Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M NPESASIQ  E E +VYSVWALPPEDV+ARI+NLM SLRSEFGGP FEPHITVVGAIRLT +DAL KFR+ACQG+KAYQATVDHV+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR
        IH TTEV                                        VETSSH C HF +K+STPYMPHMSLLY++ISDEK+KQAK IADKLDEAVNGL+
Subjt:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR

Query:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS
        FPITRLAL KTDT DETLKSW+KI EH+L SS
Subjt:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLS9 Uncharacterized protein

2.68e-128

82.76

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Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR
        IHPTTEV                                        VETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR
Subjt:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR

Query:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS
        FPITRLALCKTDTADETLKSWDKIVEHDLSSS
Subjt:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS

A0A1S3AYZ1 cyclic phosphodiesterase-like

5.88e-116

75.86

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Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIRLTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR
        IHPTTEV                                        VETSSHFCKHF FK+STPYMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+
Subjt:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR

Query:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS
        FPITRLAL KTDT+DETLKSW+KIVEHDLSSS
Subjt:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS

A0A5D3CNS3 Cyclic phosphodiesterase-like

1.81e-109

73.71

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Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIRLTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR
        IHPTTEVLPSH SALP RLL                                             YMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+
Subjt:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR

Query:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS
        FPITRLAL KTDT+DETLKSW+KIVEHDLSSS
Subjt:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS

A0A6J1EGC1 cyclic phosphodiesterase-like

2.36e-94

64.66

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Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M NPES  IQ  E E +VYSVWALPPEDV ARI  LM SLRSEFGGP FEPHITVVGAIRLT +DAL KFR+AC+G+KAYQATVD V+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR
        IHPTT                                        QVVETSSH C HF +K+ TPYMPH+SLLY++ISDE++KQAKE+A+KLDEA+NGL 
Subjt:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR

Query:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS
        FPITRLAL KTDT DETLKSW+KI E DL SS
Subjt:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS

A0A6J1INY2 cyclic phosphodiesterase-like

4.45e-97

64.66

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Query:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M NPES +IQ  E E +VYSVWALPPEDV+ARI  LM SLRSEFGGP FEPHITVVGAIRLT +DAL KFR+AC+G+KAYQATVD V+TGTFFYQCVFLL
Subjt:  MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR
        IHPTT                                        QVVETSSH C HF +K+STPYMPH+SLLY++ISDE++KQAKE+A+KLDEA+NGL 
Subjt:  IHPTTEVLPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLR

Query:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS
        FP+TRLAL KTDT DETLKSW+KI E DL SS
Subjt:  FPITRLALCKTDTADETLKSWDKIVEHDLSSS

SwissProt top hits

e value

%identity

Alignment

O04147 Cyclic phosphodiesterase

2.6e-44

42.47

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Query:  DEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVLPSH
        +E +  VYSVWALP E+   R + LM++LRSEF GP F PH+TV  +  LTA++A   F +AC G+KAY ATVD V+TGTFF+QCVFLL+  T EV+   
Subjt:  DEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVLPSH

Query:  LSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKT
                                             E   H   HF+  ++TPYMPH+SLLY+ +++E++K A+E A  LD +++GL F + RLALCKT
Subjt:  LSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKT

Query:  DTADETLKSWDKIVEHDLS
        DT D+TL++W+ +   +L+
Subjt:  DTADETLKSWDKIVEHDLS

Arabidopsis top hits

e value

%identity

Alignment

AT4G18930.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

1.8e-45

42.47

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Query:  DEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVLPSH
        +E +  VYSVWALP E+   R + LM++LRSEF GP F PH+TV  +  LTA++A   F +AC G+KAY ATVD V+TGTFF+QCVFLL+  T EV+   
Subjt:  DEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVLPSH

Query:  LSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKT
                                             E   H   HF+  ++TPYMPH+SLLY+ +++E++K A+E A  LD +++GL F + RLALCKT
Subjt:  LSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKT

Query:  DTADETLKSWDKIVEHDLS
        DT D+TL++W+ +   +L+
Subjt:  DTADETLKSWDKIVEHDLS

AT4G18940.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

2.7e-36

36.61

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Query:  QSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAI--RLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEV
        + DEEE  +Y++WA+P +DV  R++ LM+ LRSEFGGP F+PH+T+VG    +LTA +A   F++AC+G K Y ATVD V+ GT ++QC+++ +  T EV
Subjt:  QSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAI--RLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEV

Query:  LPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLA
        +                                          + HF  HF   +   Y+PHMS+LY  +++ ++K+A E A  LD +++GL F I R+A
Subjt:  LPSHLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLA

Query:  LCKTDTADETLKSWDKIVEHDLSS
        L  TD     + SW K+ EH L S
Subjt:  LCKTDTADETLKSWDKIVEHDLSS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATGAACCCAGAATCGGCATCTATCCAATCCGATGAAGAGGAAACGCACGTGTATTCTGTGTGGGCTCTTCCTCCCGAAGATGTCTCCGCCAGAATCGAGAACCTCAT
GAAAAGCCTCAGATCCGAGTTTGGCGGGCCCCTATTCGAGCCACATATCACCGTTGTTGGAGCAATCCGTCTCACCGCTGAAGACGCCCTTACCAAATTCCGCACGGCTT
GTCAGGGGATTAAGGCTTATCAAGCCACCGTCGATCATGTAACCACCGGAACCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCACCGAGGTGCTGCCCTCT
CATCTTTCTGCTCTTCCTTTCCGTCTTTTACGGTTCTTTGTTTTTCCTCTTTTTGTTTGTTTGATTCTTCTCTCGCCTCCTCTTTTTTTTTTTTTTTTTCCTTTTCAGGT
GGTGGAGACAAGTTCACATTTTTGTAAACATTTTGATTTCAAAAGCTCTACCCCTTACATGCCGCATATGAGCCTACTGTATTCCCACATATCAGATGAAAAAAGGAAGC
AGGCAAAAGAAATAGCAGACAAGCTCGATGAAGCCGTGAACGGCCTGAGATTCCCCATTACTCGACTTGCACTGTGCAAAACAGACACTGCGGATGAAACTCTGAAGTCC
TGGGATAAAATTGTAGAACACGATCTTTCTTCAAGTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVLPS
HLSALPFRLLRFFVFPLFVCLILLSPPLFFFFFPFQVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS
WDKIVEHDLSSS

Cucsat.G2504 (gene) of Cucumber (B10) v3 genome