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Cucsat.G2690 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2690
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationctg1006:586983..589315
RNA-Seq ExpressionCucsat.G2690
SyntenyCucsat.G2690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039931.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.44e-0746.48Show/hide
Query:  DIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGKQVSQKSVISSYGPLYMNVSILLRSSK
        DIP+W+LN++G F I SVK+AIH  +   D SN   P +FK   K    K+  S  GPL MN SI L + K
Subjt:  DIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGKQVSQKSVISSYGPLYMNVSILLRSSK

KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.70e-0535.64Show/hide
Query:  ISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGK-QVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKK
        + TP  NRG   P+W LN+N  F  ASVKRAI    A    +N  +PN++K   K +  +K     +  ++  ++   R  K RL NW L+PNW  +  K
Subjt:  ISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGK-QVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKK

Query:  T
        +
Subjt:  T

KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.61e-0532.67Show/hide
Query:  ISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGK-QVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKK
        + TP  NRG   P+WKLN+N  F  ASVK+   +L+         +PN++K   K +  +K     +  ++  ++   R  K RL NW L+PNW  +  K
Subjt:  ISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGK-QVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKK

Query:  T
        +
Subjt:  T

TYK21646.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.06e-0440.3Show/hide
Query:  PENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGKQVSQKSVISSYGPLY
        P  +RG+  PIWK+N +G F IASVKRA+  ++     +    PNIFKV  K    K +   Y   Y
Subjt:  PENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGKQVSQKSVISSYGPLY

TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.56e-0532.67Show/hide
Query:  ISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGK-QVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKK
        + TP  NRG   P+WKLN+N  F  ASVK+   +L+         +PN++K   K +  +K     +  ++  ++   R  K RL NW L+PNW  +  K
Subjt:  ISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGK-QVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKK

Query:  T
        +
Subjt:  T

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein8.25e-0635.64Show/hide
Query:  ISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGK-QVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKK
        + TP  NRG   P+W LN+N  F  ASVKRAI    A    +N  +PN++K   K +  +K     +  ++  ++   R  K RL NW L+PNW  +  K
Subjt:  ISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGK-QVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKK

Query:  T
        +
Subjt:  T

A0A5A7TE48 LINE-1 retrotransposable element ORF2 protein1.18e-0746.48Show/hide
Query:  DIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGKQVSQKSVISSYGPLYMNVSILLRSSK
        DIP+W+LN++G F I SVK+AIH  +   D SN   P +FK   K    K+  S  GPL MN SI L + K
Subjt:  DIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGKQVSQKSVISSYGPLYMNVSILLRSSK

A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein2.72e-0532.67Show/hide
Query:  ISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGK-QVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKK
        + TP  NRG   P+WKLN+N  F  ASVK+   +L+         +PN++K   K +  +K     +  ++  ++   R  K RL NW L+PNW  +  K
Subjt:  ISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGK-QVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKK

Query:  T
        +
Subjt:  T

A0A5D3DDJ7 LINE-1 retrotransposable element ORF2 protein1.48e-0440.3Show/hide
Query:  PENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGKQVSQKSVISSYGPLY
        P  +RG+  PIWK+N +G F IASVKRA+  ++     +    PNIFKV  K    K +   Y   Y
Subjt:  PENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGKQVSQKSVISSYGPLY

A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein2.69e-0532.67Show/hide
Query:  ISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGK-QVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKK
        + TP  NRG   P+WKLN+N  F  ASVK+   +L+         +PN++K   K +  +K     +  ++  ++   R  K RL NW L+PNW  +  K
Subjt:  ISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGK-QVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKK

Query:  T
        +
Subjt:  T

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGCCTTGAGATCTCTACTCCTGAAAACAATCGTGGCTCTGATATACCAATTTGGAAGTTGAATACAAACGGTCAGTTTTGCATTGCCTCAGTCAAAAGAGCTAT
ACATGTGTTGAACGCCCATGATGATCAGTCAAACATGATCAACCCAAATATCTTCAAAGTTTATGGAAAGCAAGTATCCCAAAAAAGTGTAATTTCTTCGTATGGACCCT
TATACATGAATGTATCAATACTACTCAGAAGCTCAAAAACAAGGCTCTCAAACTGGTATCTCAATCCAAACTGGTACTCTCTTTCCAAAAAAACAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTGCCTTGAGATCTCTACTCCTGAAAACAATCGTGGCTCTGATATACCAATTTGGAAGTTGAATACAAACGGTCAGTTTTGCATTGCCTCAGTCAAAAGAGCTAT
ACATGTGTTGAACGCCCATGATGATCAGTCAAACATGATCAACCCAAATATCTTCAAAGTTTATGGAAAGCAAGTATCCCAAAAAAGTGTAATTTCTTCGTATGGACCCT
TATACATGAATGTATCAATACTACTCAGAAGCTCAAAAACAAGGCTCTCAAACTGGTATCTCAATCCAAACTGGTACTCTCTTTCCAAAAAAACAATCTGA
Protein sequenceShow/hide protein sequence
MGCLEISTPENNRGSDIPIWKLNTNGQFCIASVKRAIHVLNAHDDQSNMINPNIFKVYGKQVSQKSVISSYGPLYMNVSILLRSSKTRLSNWYLNPNWYSLSKKTI