; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G2691 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2691
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionKRR1 small subunit processome component
Genome locationctg1006:618104..623180
RNA-Seq ExpressionCucsat.G2691
SyntenyCucsat.G2691
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR024166 - Ribosomal RNA assembly KRR1
IPR036612 - K Homology domain, type 1 superfamily
IPR041174 - Krr1, KH1 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056531.1 KRR1 small subunit processome component-like protein [Cucumis melo var. makuwa]3.45e-15881.06Show/hide
Query:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
        MEDIEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
Subjt:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE
        RDPYIIVKARDLIKLLSRSVPAPQ                                                       GNTVAAMGSFKGLKQVRRVVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE

Query:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
        ECMMNKMHPVYNIKILMM+KELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Subjt:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE

Query:  K
        K
Subjt:  K

XP_004139889.2 KRR1 small subunit processome component homolog [Cucumis sativus]1.56e-16181.73Show/hide
Query:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
        MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
Subjt:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE
        RDPYIIVKARDLIKLLSRSVPAPQ                                                       GNTVAAMGSFKGLKQVRRVVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE

Query:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
        ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Subjt:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE

Query:  K
        K
Subjt:  K

XP_008447125.1 PREDICTED: KRR1 small subunit processome component homolog [Cucumis melo]3.45e-15881.06Show/hide
Query:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
        MEDIEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
Subjt:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE
        RDPYIIVKARDLIKLLSRSVPAPQ                                                       GNTVAAMGSFKGLKQVRRVVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE

Query:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
        ECMMNKMHPVYNIKILMM+KELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Subjt:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE

Query:  K
        K
Subjt:  K

XP_022969421.1 KRR1 small subunit processome component homolog [Cucurbita maxima]1.78e-14675.67Show/hide
Query:  EDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTR
        E+IEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE GMLEVSSFSTLFPVYREKYL+D WPVVKSALKEFGI  ELNL+EGSMTVSTTRKT+
Subjt:  EDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTR

Query:  DPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVEE
        DPYIIVKARDLIKLLSRSVPAPQ                                                       GNTVAAMGSFKGLKQVRR+VEE
Subjt:  DPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVEE

Query:  CMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
        CMMNKMHPVYNIKILMM+KELANDPALA+ENWDRFLPKFKKKTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL++KKKSAKKWQ+KQEKQAEK
Subjt:  CMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK

XP_038888683.1 KRR1 small subunit processome component homolog [Benincasa hispida]2.81e-15278.74Show/hide
Query:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
        MEDIEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE GMLEVSSFSTLFPVYREKYLR+TWPVVKSALKEFGIV ELNLIEGSMTVSTTRKT
Subjt:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE
        RDPYIIVKARDLIKLLSRSVPAPQ                                                       GNTVAAMGSFKGLKQVRRVVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE

Query:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
        ECMMNKMHPVYNIKILMM+KELANDPALANENWDRFLPKFKKKTVKQKKVKSK KK YTPFPPPQQPSQIDIQLETGEYFL++KKKSAKKWQDKQEKQAE
Subjt:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A0A0K7G6 KRR1 small subunit processome component7.57e-16281.73Show/hide
Query:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
        MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
Subjt:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE
        RDPYIIVKARDLIKLLSRSVPAPQ                                                       GNTVAAMGSFKGLKQVRRVVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE

Query:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
        ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Subjt:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE

Query:  K
        K
Subjt:  K

A0A1S3BGN7 KRR1 small subunit processome component1.67e-15881.06Show/hide
Query:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
        MEDIEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
Subjt:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE
        RDPYIIVKARDLIKLLSRSVPAPQ                                                       GNTVAAMGSFKGLKQVRRVVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE

Query:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
        ECMMNKMHPVYNIKILMM+KELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Subjt:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE

Query:  K
        K
Subjt:  K

A0A5D3CP78 KRR1 small subunit processome component1.67e-15881.06Show/hide
Query:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
        MEDIEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT
Subjt:  MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE
        RDPYIIVKARDLIKLLSRSVPAPQ                                                       GNTVAAMGSFKGLKQVRRVVE
Subjt:  RDPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVE

Query:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
        ECMMNKMHPVYNIKILMM+KELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Subjt:  ECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE

Query:  K
        K
Subjt:  K

A0A6J1GLG6 KRR1 small subunit processome component7.04e-14675.33Show/hide
Query:  EDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTR
        E+IEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFD SWNE GMLEVSSFSTLFPVYREKYL+D WPVVKSALKEFGI  +LNL+EGSMTVSTTRKT+
Subjt:  EDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTR

Query:  DPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVEE
        DPYIIVKARDLIKLLSRSVPAPQ                                                       GNTVAAMGSFKGLKQVRR+VEE
Subjt:  DPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVEE

Query:  CMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
        CMMNKMHPVYNIKILMM+KELANDPALANENWDRFLPKFKKKTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL++KKKSAKKWQ+KQEKQAEK
Subjt:  CMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK

A0A6J1HWB5 KRR1 small subunit processome component8.64e-14775.67Show/hide
Query:  EDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTR
        E+IEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE GMLEVSSFSTLFPVYREKYL+D WPVVKSALKEFGI  ELNL+EGSMTVSTTRKT+
Subjt:  EDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTR

Query:  DPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVEE
        DPYIIVKARDLIKLLSRSVPAPQ                                                       GNTVAAMGSFKGLKQVRR+VEE
Subjt:  DPYIIVKARDLIKLLSRSVPAPQ-------------------------------------------------------GNTVAAMGSFKGLKQVRRVVEE

Query:  CMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
        CMMNKMHPVYNIKILMM+KELANDPALA+ENWDRFLPKFKKKTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL++KKKSAKKWQ+KQEKQAEK
Subjt:  CMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK

SwissProt top hitse value%identityAlignment
B3LU25 KRR1 small subunit processome component8.3e-6047.06Show/hide
Query:  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL
        H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  AL +  I   L+L+EGSMTV TTRKT DP II+KARDLIKL
Subjt:  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL

Query:  LSRSVPAP-------------------------------------------------------QGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKI
        L+RSVP P                                                       QGNTV+AMG FKGLK+VRRVVE+CM N +HP+Y+IK 
Subjt:  LSRSVPAP-------------------------------------------------------QGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKI

Query:  LMMRKELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
        LM+++ELA  P LANE+W RFLP FKK+ V   K KK+++  KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+
Subjt:  LMMRKELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK

B5VEQ2 KRR1 small subunit processome component8.3e-6047.06Show/hide
Query:  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL
        H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  AL +  I   L+L+EGSMTV TTRKT DP II+KARDLIKL
Subjt:  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL

Query:  LSRSVPAP-------------------------------------------------------QGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKI
        L+RSVP P                                                       QGNTV+AMG FKGLK+VRRVVE+CM N +HP+Y+IK 
Subjt:  LSRSVPAP-------------------------------------------------------QGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKI

Query:  LMMRKELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
        LM+++ELA  P LANE+W RFLP FKK+ V   K KK+++  KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+
Subjt:  LMMRKELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK

C8Z430 KRR1 small subunit processome component8.3e-6047.06Show/hide
Query:  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL
        H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  AL +  I   L+L+EGSMTV TTRKT DP II+KARDLIKL
Subjt:  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL

Query:  LSRSVPAP-------------------------------------------------------QGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKI
        L+RSVP P                                                       QGNTV+AMG FKGLK+VRRVVE+CM N +HP+Y+IK 
Subjt:  LSRSVPAP-------------------------------------------------------QGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKI

Query:  LMMRKELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
        LM+++ELA  P LANE+W RFLP FKK+ V   K KK+++  KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+
Subjt:  LMMRKELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK

O74777 KRR1 small subunit processome component homolog2.1e-6346.56Show/hide
Query:  MEDIEQQHQNK---TKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTT
        M ++E   +N     K+K ++ + KPWD D +ID WK+E F    ++   LE SSF+TLFP YREKYLR+ WP V  AL +FGI   L+L+EGSMTV TT
Subjt:  MEDIEQQHQNK---TKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTT

Query:  RKTRDPYIIVKARDLIKLLSRSVPAP-------------------------------------------------------QGNTVAAMGSFKGLKQVRR
        RKT DPY I+ ARDLIKLL+RSVP P                                                       QG TVA MG +KGLK+VRR
Subjt:  RKTRDPYIIVKARDLIKLLSRSVPAP-------------------------------------------------------QGNTVAAMGSFKGLKQVRR

Query:  VVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTV-KQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQE
        +VE+CM N +HP+Y+IK LM+++ELA DP LANE+WDRFLP+FKK+ V ++K  K +  K+YTPFPP Q PS++D+++E+GEYFL +++K  KK  +K+E
Subjt:  VVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTV-KQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQE

Query:  KQAEK
        +Q EK
Subjt:  KQAEK

P25586 KRR1 small subunit processome component8.3e-6047.06Show/hide
Query:  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL
        H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  AL +  I   L+L+EGSMTV TTRKT DP II+KARDLIKL
Subjt:  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL

Query:  LSRSVPAP-------------------------------------------------------QGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKI
        L+RSVP P                                                       QGNTV+AMG FKGLK+VRRVVE+CM N +HP+Y+IK 
Subjt:  LSRSVPAP-------------------------------------------------------QGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKI

Query:  LMMRKELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
        LM+++ELA  P LANE+W RFLP FKK+ V   K KK+++  KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+
Subjt:  LMMRKELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK

Arabidopsis top hitse value%identityAlignment
AT5G08420.1 RNA-binding KH domain-containing protein6.0e-9860.66Show/hide
Query:  MEDIEQQHQN---KTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTT
        +E+I  + QN   + K KGKH+KPKPWD+DPNIDRW +EKFDP+WN  GM E S+FSTLFP YREKYL++ WP V+SALKE+G+  +LNL+EGSMTVSTT
Subjt:  MEDIEQQHQN---KTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTT

Query:  RKTRDPYIIVKARDLIKLLSRSVPAP-------------------------------------------------------QGNTVAAMGSFKGLKQVRR
        RKTRDPYIIVKARDLIKLLSRSVPAP                                                       QG+TVAAMG FKGLKQ+RR
Subjt:  RKTRDPYIIVKARDLIKLLSRSVPAP-------------------------------------------------------QGNTVAAMGSFKGLKQVRR

Query:  VVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEK
        +VE+C+ N MHPVY+IK LMM+KEL  DPALANE+WDRFLP F+KK VKQKK KSK KK YTPFPPPQ PS+ID+QLE+GEYF+++KKKS KKWQ+KQEK
Subjt:  VVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEK

Query:  QAEKN
        Q+EK+
Subjt:  QAEKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTCACGCAGGTCAAGTTCACGCCGCCTCTCACCCTCTCGTCTCGGCCTATCATCTCACGCCGTCGTCGCTGTTCAATCGTCTCTCCTTCTCAGTCTCCGGCGGTCATCT
CCGATCGTCTCCACTTCTCAGAAGTCTCCGATTGTCGCTCGCGCTTGGCTCTCCCTCACCATTGCGTTGTTGTGTTGCCGCTGGCTACGATACCTTGTTGTGTACAACTC
ATCCTCGAGGACAGACCAATCGGATTATTTTCTCAAGTCCAGTTATGGAGGACATAGAGCAACAACACCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAG
CCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGT
GTACAGAGAAAAATATTTGCGAGATACATGGCCAGTTGTGAAGTCTGCACTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGATTGAAGGATCAATGACAGTTTCAA
CAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGGCAACACAGTTGCTGCGATGGGT
TCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGATTCTCATGATGAGGAAAGAGCTTGCTAA
TGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCAAAGAAGCAGTACACACCTT
TCCCTCCTCCTCAGCAACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCAGCAAAGAAATGGCAGGATAAGCAGGAGAAG
CAGGCAGAAAAAAACTGCTGA
mRNA sequenceShow/hide mRNA sequence
GGTCACGCAGGTCAAGTTCACGCCGCCTCTCACCCTCTCGTCTCGGCCTATCATCTCACGCCGTCGTCGCTGTTCAATCGTCTCTCCTTCTCAGTCTCCGGCGGTCATCT
CCGATCGTCTCCACTTCTCAGAAGTCTCCGATTGTCGCTCGCGCTTGGCTCTCCCTCACCATTGCGTTGTTGTGTTGCCGCTGGCTACGATACCTTGTTGTGTACAACTC
ATCCTCGAGGACAGACCAATCGGATTATTTTCTCAAGTCCAGTTATGGAGGACATAGAGCAACAACACCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAG
CCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGT
GTACAGAGAAAAATATTTGCGAGATACATGGCCAGTTGTGAAGTCTGCACTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGATTGAAGGATCAATGACAGTTTCAA
CAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGGCAACACAGTTGCTGCGATGGGT
TCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGATTCTCATGATGAGGAAAGAGCTTGCTAA
TGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCAAAGAAGCAGTACACACCTT
TCCCTCCTCCTCAGCAACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCAGCAAAGAAATGGCAGGATAAGCAGGAGAAG
CAGGCAGAAAAAAACTGCTGA
Protein sequenceShow/hide protein sequence
GHAGQVHAASHPLVSAYHLTPSSLFNRLSFSVSGGHLRSSPLLRSLRLSLALGSPSPLRCCVAAGYDTLLCTTHPRGQTNRIIFSSPVMEDIEQQHQNKTKHKGKHDKPK
PWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQGNTVAAMG
SFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEK
QAEKNC