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Cucsat.G271 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G271
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionSerine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2
Genome locationctg1:6231530..6236154
RNA-Seq ExpressionCucsat.G271
SyntenyCucsat.G271
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040209.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.80e-0436.51Show/hide
Query:  TIDSEESEGFSFQVLQGCANTMDWLVKN-LPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWG
        T+  +++  F ++V+    NT+D LV+    L+  FC +LC  V+EDLDH+ W C   R +W 
Subjt:  TIDSEESEGFSFQVLQGCANTMDWLVKN-LPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWG

KAA0067918.1 hypothetical protein E6C27_scaffold138G00850 [Cucumis melo var. makuwa]1.75e-0646.67Show/hide
Query:  SEESEGFSFQVLQGCANTMDWLVKNLPL-LGLFCGILCWKVKEDLDHILWRCKLFRAMWG
        S+E   F +QVL G  NT+D LV+   L +G FC +LC K +EDLDH+   C+  RA+W 
Subjt:  SEESEGFSFQVLQGCANTMDWLVKNLPL-LGLFCGILCWKVKEDLDHILWRCKLFRAMWG

TYK04295.1 serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 [Cucumis melo var. makuwa]3.35e-0746.67Show/hide
Query:  SEESEGFSFQVLQGCANTMDWLVKNLPL-LGLFCGILCWKVKEDLDHILWRCKLFRAMWG
        S+E   F +QVL G  NT+D LV+   L +G FC +LC K +EDLDH+   C+  RA+W 
Subjt:  SEESEGFSFQVLQGCANTMDWLVKNLPL-LGLFCGILCWKVKEDLDHILWRCKLFRAMWG

TYK06215.1 peroxin Pex14 isoform X3 [Cucumis melo var. makuwa]4.33e-0547.17Show/hide
Query:  FSFQVLQGCANTMDWLVKNLPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWG
        F +Q L G  NT+D LV+   L G FC  L  K +EDLDH  W C+  RA+W 
Subjt:  FSFQVLQGCANTMDWLVKNLPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWG

TYK29954.1 reverse transcriptase [Cucumis melo var. makuwa]2.48e-0651.85Show/hide
Query:  FSFQVLQGCANTMDWLVKN-LPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWG
        F++QVL   AN +D LV+   P     C ILC K KEDLDH+LW C+  RA+WG
Subjt:  FSFQVLQGCANTMDWLVKN-LPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWG

TrEMBL top hitse value%identityAlignment
A0A5A7VJE4 zf-RVT domain-containing protein8.48e-0746.67Show/hide
Query:  SEESEGFSFQVLQGCANTMDWLVKNLPL-LGLFCGILCWKVKEDLDHILWRCKLFRAMWG
        S+E   F +QVL G  NT+D LV+   L +G FC +LC K +EDLDH+   C+  RA+W 
Subjt:  SEESEGFSFQVLQGCANTMDWLVKNLPL-LGLFCGILCWKVKEDLDHILWRCKLFRAMWG

A0A5D3BYR2 Serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X21.62e-0746.67Show/hide
Query:  SEESEGFSFQVLQGCANTMDWLVKNLPL-LGLFCGILCWKVKEDLDHILWRCKLFRAMWG
        S+E   F +QVL G  NT+D LV+   L +G FC +LC K +EDLDH+   C+  RA+W 
Subjt:  SEESEGFSFQVLQGCANTMDWLVKNLPL-LGLFCGILCWKVKEDLDHILWRCKLFRAMWG

A0A5D3C4A7 Peroxin Pex14 isoform X32.10e-0547.17Show/hide
Query:  FSFQVLQGCANTMDWLVKNLPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWG
        F +Q L G  NT+D LV+   L G FC  L  K +EDLDH  W C+  RA+W 
Subjt:  FSFQVLQGCANTMDWLVKNLPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWG

A0A5D3C7M9 Ty3-gypsy retrotransposon protein1.84e-0436.51Show/hide
Query:  TIDSEESEGFSFQVLQGCANTMDWLVKN-LPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWG
        T+  +++  F ++V+    NT+D LV+    L+  FC +LC  V+EDLDH+ W C   R +W 
Subjt:  TIDSEESEGFSFQVLQGCANTMDWLVKN-LPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWG

A0A5D3E255 Reverse transcriptase1.20e-0651.85Show/hide
Query:  FSFQVLQGCANTMDWLVKN-LPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWG
        F++QVL   AN +D LV+   P     C ILC K KEDLDH+LW C+  RA+WG
Subjt:  FSFQVLQGCANTMDWLVKN-LPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAACTCTAGCTGCCTTCTTCTTCTTTTGTCTTTTCTCGTACAAGTCTTTTTTCCGTTGCTTGTTGACCGGTCTTCCCTAAAGAGTCGGTCTCTTTCGACAATTGA
TTCCGAAGAAAGTGAAGGTTTTTCTTTTCAAGTCTTACAAGGTTGCGCTAACACGATGGATTGGCTTGTGAAGAACTTGCCCTTACTTGGTTTGTTTTGCGGTATTCTTT
GTTGGAAGGTGAAGGAAGACTTGGATCATATTCTCTGGCGTTGTAAGTTATTCAGAGCTATGTGGGGGTTACTCTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACAACTCTAGCTGCCTTCTTCTTCTTTTGTCTTTTCTCGTACAAGTCTTTTTTCCGTTGCTTGTTGACCGGTCTTCCCTAAAGAGTCGGTCTCTTTCGACAATTGA
TTCCGAAGAAAGTGAAGGTTTTTCTTTTCAAGTCTTACAAGGTTGCGCTAACACGATGGATTGGCTTGTGAAGAACTTGCCCTTACTTGGTTTGTTTTGCGGTATTCTTT
GTTGGAAGGTGAAGGAAGACTTGGATCATATTCTCTGGCGTTGTAAGTTATTCAGAGCTATGTGGGGGTTACTCTATTAG
Protein sequenceShow/hide protein sequence
MHNSSCLLLLLSFLVQVFFPLLVDRSSLKSRSLSTIDSEESEGFSFQVLQGCANTMDWLVKNLPLLGLFCGILCWKVKEDLDHILWRCKLFRAMWGLLY