| GenBank top hits | e value | %identity | Alignment |
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| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 3.30e-100 | 100 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_011653886.2 probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis sativus] | 2.71e-99 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKA++GGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_011659113.1 sm-like protein LSM4 [Cucumis sativus] | 7.78e-99 | 99.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPG RPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_022143617.1 probable U6 snRNA-associated Sm-like protein LSm4 [Momordica charantia] | 3.86e-99 | 97.99 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLG+GRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDG+KA+SGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_022926288.1 sm-like protein LSM4 isoform X1 [Cucurbita moschata] | 1.11e-98 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0K9I4 U6 snRNA-associated Sm-like protein LSm4 | 3.77e-99 | 99.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPG RPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 1.60e-100 | 100 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1CRC5 U6 snRNA-associated Sm-like protein LSm4 | 1.87e-99 | 97.99 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLG+GRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDG+KA+SGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1EHL8 U6 snRNA-associated Sm-like protein LSm4 | 5.35e-99 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1J2N4 U6 snRNA-associated Sm-like protein LSm4 | 5.35e-99 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 9.7e-53 | 77.18 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
G +DG GA+ GRG+G GK G NR GRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 2.6e-58 | 82 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSR DRKP GVGR R R
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: -GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GR+D GR KG+GRG DDG + GRGKGGP K G R GGRGRG
Subjt: -GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 2.9e-57 | 82.12 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPLGVGRGRG
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYIRGNTIKYLRVPDEVIDKVQEET KSR+DR+P GVGRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPLGVGRGRG
Query: RGR-EDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
RG PGGR G+GRG DDG GGRG+GG GGK G + GGRGRG
Subjt: RGR-EDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 | 1.2e-39 | 64.29 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE GRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRG-FDDGAKAASGGRGKGGPGGKPG
++ GR G GRG F + G G+G P KPG
Subjt: GREDGPGGRPAKGMGRG-FDDGAKAASGGRGKGGPGGKPG
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 2.5e-56 | 80.67 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRG-FDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRE+G G R +G GR AKA RG+G GK G GGRGRG
Subjt: GREDGPGGRPAKGMGRG-FDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 3.8e-12 | 34.78 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPLGVGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD + ++ K ++ LGVGR
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPLGVGR
Query: GRGRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGP
GRG R G+PA G GRG +GGRG P
Subjt: GRGRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGP
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| AT1G76300.1 snRNP core protein SMD3 | 5.5e-11 | 32.84 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPLGVGRGRGR
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD + + + ++ + + LGVGRGRG
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGP
AKG GRG GGRG P
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGP
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 2.6e-08 | 39.6 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGRGRGREDGPGG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGRGRGR G GG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGRGRGREDGPGG
Query: R
R
Subjt: R
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 5.3e-06 | 36.04 | Show/hide |
Query: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGR
+ELKNG +G + + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGR
Subjt: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGR
Query: GRGREDGPGGR
GRGR G GGR
Subjt: GRGREDGPGGR
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 6.9e-54 | 77.18 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
G +DG GA+ GRG+G GK G NR GRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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