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Cucsat.G2793 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2793
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionThylakoid protein sll1769
Genome locationctg1041:2097595..2101343
RNA-Seq ExpressionCucsat.G2793
SyntenyCucsat.G2793
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domainsIPR040003 - Plastoglobular protein 18-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139667.1 uncharacterized protein At4g13200, chloroplastic [Cucumis sativus]6.49e-112100Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE
        GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE

XP_008447268.1 PREDICTED: uncharacterized protein At4g13200, chloroplastic isoform X1 [Cucumis melo]3.24e-9689.33Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSS +TSSVS SPFSLV TKPKITHYS PSLL FRSSSTPSNL+FRGISHFQPNG SR LARCSSGDGDSRT+LDAFFLGKALAEALTERIESTIGEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE
        GIG+LQAEQQKQITDFQDEVIERAKKAKEKAAR++KEVQ PVSSSVISP IEV SSPTSSSPDADSES VNQDP LG+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE

XP_022953678.1 uncharacterized protein At4g13200, chloroplastic-like [Cucurbita moschata]3.16e-6969.73Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGV SSVS S FS+V TK KITH S PSL+ FRSSST SNLKFR      PNG  RF+A CSSGDGD+RTVLDAFF+GKA AE LTER+EST+GEVL 
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSS-------PDADSESVVNQDPSLGE
         IGRLQAE+Q+QI DFQ+EVI+RAKKAKEKA RD+KE QGP+SSS+IS  IEV SSPT+SS       P+A SE+VVNQDP  G+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSS-------PDADSESVVNQDPSLGE

XP_023548651.1 uncharacterized protein At4g13200, chloroplastic-like [Cucurbita pepo subsp. pepo]7.38e-6870.27Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGV SSVS S FS V TK KITH S PSL+ FRSSST SNLKFR      P+G  RF+A CSSGDGD+RTVLDAFFLGKA AE LTER+EST+G VLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSS-------PDADSESVVNQDPSLGE
         IGRLQAE+Q+QI DFQ+EVIERAKKAKEKA RD+KE QGP+SSS+IS  IEV SSPT+SS       P+A SE+VVNQDP  G+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSS-------PDADSESVVNQDPSLGE

XP_038900031.1 uncharacterized protein At4g13200, chloroplastic [Benincasa hispida]8.51e-9484.86Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGVTSSVSQSPFSLV TKPKITHYS  SLLLFRSSSTPSNLKFR ISHFQPNG  RF+ARCSSGDGDSRTVLDAFFLGKALAEALTERIEST+GEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSS-------PDADSESVVNQDPSLGE
        GIGRLQAEQQKQITDFQ+EVIERAKKAK+KAARD+KEVQGPVSSS+ SP IEV SSPT S+       PD DSE+VVNQDP LG+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSS-------PDADSESVVNQDPSLGE

TrEMBL top hitse value%identityAlignment
A0A0A0K6Q2 Uncharacterized protein3.14e-112100Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE
        GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE

A0A1S3BHX5 uncharacterized protein At4g13200, chloroplastic isoform X11.57e-9689.33Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSS +TSSVS SPFSLV TKPKITHYS PSLL FRSSSTPSNL+FRGISHFQPNG SR LARCSSGDGDSRT+LDAFFLGKALAEALTERIESTIGEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE
        GIG+LQAEQQKQITDFQDEVIERAKKAKEKAAR++KEVQ PVSSSVISP IEV SSPTSSSPDADSES VNQDP LG+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE

A0A6J1DJG4 uncharacterized protein At4g13200, chloroplastic3.04e-6768.11Show/hide
Query:  SGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARC---------SSGDGDSRTVLDAFFLGKALAEALTERIES
        SG+ +SVS SPFSL+ TKPK TH+S P+L + RS STPSNLK RGI HF PN   R  ARC          SGDGDSRTVLDAFFLGKALAEALTERIES
Subjt:  SGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARC---------SSGDGDSRTVLDAFFLGKALAEALTERIES

Query:  TIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTS--SSPDADSESVVNQDPSL
        T+GEVLSGIGRLQAE+QKQI DFQ+EVIERAK+AK+KAARDS EVQ P+S S+ SP I V S+     S PD  SES VN DP L
Subjt:  TIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTS--SSPDADSESVVNQDPSL

A0A6J1GNZ1 uncharacterized protein At4g13200, chloroplastic-like1.53e-6969.73Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGV SSVS S FS+V TK KITH S PSL+ FRSSST SNLKFR      PNG  RF+A CSSGDGD+RTVLDAFF+GKA AE LTER+EST+GEVL 
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSS-------PDADSESVVNQDPSLGE
         IGRLQAE+Q+QI DFQ+EVI+RAKKAKEKA RD+KE QGP+SSS+IS  IEV SSPT+SS       P+A SE+VVNQDP  G+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSS-------PDADSESVVNQDPSLGE

A0A6J1JX27 uncharacterized protein At4g13200, chloroplastic-like5.07e-6869.19Show/hide
Query:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS
        MSSGV SSVS S FS++ T+ KITH S PSL+ FRSSST SNLKFR      PNG  RF+A CSSGDGD+RTVLDAFFLGKA AE LTER+EST+GEVLS
Subjt:  MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLS

Query:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSP-------DADSESVVNQDPSLGE
         IGRLQAE+Q+QI DFQ+EVIERAKKAKEKA RD+KE QGP+SSS++S  IEV SSPT SS        +A SE+VVNQDP  G+
Subjt:  GIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSP-------DADSESVVNQDPSLGE

SwissProt top hitse value%identityAlignment
P73628 Thylakoid protein sll17699.0e-0534.09Show/hide
Query:  VLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSS
        VL AFFLG+A AE L+E++E  +   LS +G+  AEQ++ +  F  EV  RA     +       V GPVS+  +   ++   +  +S
Subjt:  VLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSS

Q8LDV3 Uncharacterized protein At4g13200, chloroplastic8.1e-2253.91Show/hide
Query:  SGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVI----SPKIEVFSSPTSS
        SG+ ++++VLDAFFLGKALAE + ERIEST+GEVLS IG+ QAEQQKQ+ + Q+EV+ERAKKAKE+AAR++ E QG V+S  +    +P   V +S TS+
Subjt:  SGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVI----SPKIEVFSSPTSS

Query:  SPDADSESVVNQDPS
        S       +V+ + S
Subjt:  SPDADSESVVNQDPS

Arabidopsis top hitse value%identityAlignment
AT4G13200.1 unknown protein5.7e-2353.91Show/hide
Query:  SGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVI----SPKIEVFSSPTSS
        SG+ ++++VLDAFFLGKALAE + ERIEST+GEVLS IG+ QAEQQKQ+ + Q+EV+ERAKKAKE+AAR++ E QG V+S  +    +P   V +S TS+
Subjt:  SGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQKQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVI----SPKIEVFSSPTSS

Query:  SPDADSESVVNQDPS
        S       +V+ + S
Subjt:  SPDADSESVVNQDPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTGGGGTTACATCTTCTGTTTCCCAATCTCCTTTTTCACTTGTGACCACTAAACCAAAAATTACCCATTATTCACCTCCATCTCTCCTTCTATTTCGCTCCTC
TTCCACTCCTTCAAATCTCAAATTTCGTGGAATTTCACATTTTCAACCCAATGGGCCTTCCAGATTCTTAGCTCGTTGCAGCTCTGGTGATGGTGACAGCAGGACCGTTC
TAGATGCTTTTTTTTTAGGAAAAGCTTTGGCGGAAGCCTTAACTGAGCGAATCGAGTCAACAATTGGAGAGGTTTTGAGTGGGATTGGTAGGCTGCAAGCTGAACAACAA
AAACAAATTACTGATTTCCAGGATGAAGTGATAGAAAGAGCTAAAAAGGCCAAAGAAAAAGCAGCACGTGATTCCAAAGAAGTACAAGGACCTGTTTCCTCTTCAGTAAT
ATCGCCTAAAATCGAAGTTTTTTCGTCTCCAACTTCTTCAAGTCCGGATGCAGATTCAGAAAGTGTTGTGAATCAGGATCCTTCCCTTGGTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGTGGGGTTACATCTTCTGTTTCCCAATCTCCTTTTTCACTTGTGACCACTAAACCAAAAATTACCCATTATTCACCTCCATCTCTCCTTCTATTTCGCTCCTC
TTCCACTCCTTCAAATCTCAAATTTCGTGGAATTTCACATTTTCAACCCAATGGGCCTTCCAGATTCTTAGCTCGTTGCAGCTCTGGTGATGGTGACAGCAGGACCGTTC
TAGATGCTTTTTTTTTAGGAAAAGCTTTGGCGGAAGCCTTAACTGAGCGAATCGAGTCAACAATTGGAGAGGTTTTGAGTGGGATTGGTAGGCTGCAAGCTGAACAACAA
AAACAAATTACTGATTTCCAGGATGAAGTGATAGAAAGAGCTAAAAAGGCCAAAGAAAAAGCAGCACGTGATTCCAAAGAAGTACAAGGACCTGTTTCCTCTTCAGTAAT
ATCGCCTAAAATCGAAGTTTTTTCGTCTCCAACTTCTTCAAGTCCGGATGCAGATTCAGAAAGTGTTGTGAATCAGGATCCTTCCCTTGGTGAATAA
Protein sequenceShow/hide protein sequence
MSSGVTSSVSQSPFSLVTTKPKITHYSPPSLLLFRSSSTPSNLKFRGISHFQPNGPSRFLARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLSGIGRLQAEQQ
KQITDFQDEVIERAKKAKEKAARDSKEVQGPVSSSVISPKIEVFSSPTSSSPDADSESVVNQDPSLGE