CuGenDBv2

Gene ID	Cucsat.G2884
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Pre-mRNA-splicing factor 18
Genome location	ctg1041:4460897..4465030
RNA-Seq Expression	Cucsat.G2884
Synteny	Cucsat.G2884
Gene Ontology terms	GO:0000350 - generation of catalytic spliceosome for second transesterification step (biological process) GO:0005682 - U5 snRNP (cellular component) GO:0046540 - U4/U6 x U5 tri-snRNP complex (cellular component) GO:0071021 - U2-type post-spliceosomal complex (cellular component)
InterPro domains	IPR004098 - Prp18 IPR014906 - Pre-mRNA processing factor 4 (PRP4)-like IPR036285 - PRP4-like superfamily IPR039979 - Pre-mRNA-splicing factor 18

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0064068.1 pre-mRNA-splicing factor 18 [Cucumis melo var. makuwa]

4.10e-277

98.57

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Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQST SATAAEA STSSKSNPLASASTTSSSVA +STTTTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES

Query:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
        ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEW QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Subjt:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKLGSDERLRIMPAPEDS
        GGGKLGSDERLRIMPAPEDS
Subjt:  GGGKLGSDERLRIMPAPEDS

XP_004146980.1 pre-mRNA-splicing factor 18 [Cucumis sativus]

2.22e-281

100

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES

Query:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
        ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Subjt:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKLGSDERLRIMPAPEDS
        GGGKLGSDERLRIMPAPEDS
Subjt:  GGGKLGSDERLRIMPAPEDS

XP_008451349.1 PREDICTED: pre-mRNA-splicing factor 18 [Cucumis melo]

2.37e-276

98.33

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQST SATAAEA STSSKSNPLASASTTSSSVA +STTTTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGG DEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES

Query:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
        ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEW QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Subjt:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKLGSDERLRIMPAPEDS
        GGGKLGSDERLRIMPAPEDS
Subjt:  GGGKLGSDERLRIMPAPEDS

XP_023549183.1 pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo]

9.82e-269

95.71

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Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQS+T++  AEA S SSKSN LASASTTSSS A NST TTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADE+S
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES

Query:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
        ADGGSSGV+ DKDLKR+KANFDELCEEDKILVFFKRLLNEW QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Subjt:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKLGSDERLRIMPAPEDS
        GGGK GSDERLRIMPAPEDS
Subjt:  GGGKLGSDERLRIMPAPEDS

XP_038897671.1 pre-mRNA-splicing factor 18 [Benincasa hispida]

4.37e-272

96.9

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Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQSTTSA AAEA STSSKSNPLASASTTSSSVA NST TTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
        IDNLVLPRQEVIRRLRFLKQPIT+FGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES

Query:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
        ADGGSSGV+ DKDL RMKANFDELCEEDKILVFFKRLLNEW QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Subjt:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKLGSDERLRIMPAPEDS
        GGGK GSDERLRIMPA +DS
Subjt:  GGGKLGSDERLRIMPAPEDS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7C9 Pre-mRNA-splicing factor 18

1.07e-281

100

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES

Query:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
        ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Subjt:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKLGSDERLRIMPAPEDS
        GGGKLGSDERLRIMPAPEDS
Subjt:  GGGKLGSDERLRIMPAPEDS

A0A1S3BS26 Pre-mRNA-splicing factor 18

1.15e-276

98.33

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQST SATAAEA STSSKSNPLASASTTSSSVA +STTTTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGG DEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES

Query:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
        ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEW QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Subjt:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKLGSDERLRIMPAPEDS
        GGGKLGSDERLRIMPAPEDS
Subjt:  GGGKLGSDERLRIMPAPEDS

A0A5D3DRE9 Pre-mRNA-splicing factor 18

1.98e-277

98.57

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQST SATAAEA STSSKSNPLASASTTSSSVA +STTTTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES

Query:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
        ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEW QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Subjt:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKLGSDERLRIMPAPEDS
        GGGKLGSDERLRIMPAPEDS
Subjt:  GGGKLGSDERLRIMPAPEDS

A0A6J1GQ96 Pre-mRNA-splicing factor 18

2.75e-268

95.71

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Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQS+TS+  AEA S SSKSN LASASTTSSS A NST TTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
        IDNLVL RQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADE+S
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES

Query:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
        ADGGSSGV+ DKDLKR+KANFDELCEEDKILVFFKRLLNEW QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Subjt:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKLGSDERLRIMPAPEDS
        GGGK GSDERLRIMPAPEDS
Subjt:  GGGKLGSDERLRIMPAPEDS

A0A6J1JZG6 Pre-mRNA-splicing factor 18

1.12e-267

95.24

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Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQS+TS+  AEA S SSKSN LASAS TSSS A NST TTSKS+TDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADE+S
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEES

Query:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
        ADGGSSG + DKDLKR+KANFDELCEEDKILVFFKRLLNEW QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Subjt:  ADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKLGSDERLRIMPAPEDS
        GGGK GSDERLRIMPAPEDS
Subjt:  GGGKLGSDERLRIMPAPEDS

SwissProt top hits

e value

%identity

Alignment

Q2HJ41 Pre-mRNA-splicing factor 18

9.4e-45

34.11

Show/hide

Query:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTD
        MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+   +++ K   Q   ++           SNP+         +              
Subjt:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTD

Query:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGAD
              + L RQEVIRRLR   +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    ++          G  E G+    +
Subjt:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGAD

Query:  EESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE
        +      ++ +E  + L       D+  + D I  F K LL  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Subjt:  EESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE

Query:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL
          ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Subjt:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL

Q5RE03 Pre-mRNA-splicing factor 18

4.2e-45

34.37

Show/hide

Query:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTD
        MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+    ++ K   Q   ++           SNP+         +              
Subjt:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTD

Query:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGAD
              + L RQEVIRRLR   +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+          G  E G+    +
Subjt:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGAD

Query:  EESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE
        +      ++ +E  + L       D+  + D I  F K LL  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Subjt:  EESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE

Query:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL
          ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Subjt:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL

Q8BM39 Pre-mRNA-splicing factor 18

3.2e-45

34.37

Show/hide

Query:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTD
        MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+   +++ K   Q   ++           SNP+         +              
Subjt:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTD

Query:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGAD
              + L RQEVIRRLR   +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+          G  E G+    +
Subjt:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGAD

Query:  EESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE
        +      ++ +E  + L       D+  + D I  F K LL  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Subjt:  EESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE

Query:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL
          ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Subjt:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL

Q99633 Pre-mRNA-splicing factor 18

3.2e-45

34.37

Show/hide

Query:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTD
        MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+   +++ K   Q   ++           SNP+         +              
Subjt:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTD

Query:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGAD
              + L RQEVIRRLR   +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+          G  E G+    +
Subjt:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGAD

Query:  EESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE
        +      ++ +E  + L       D+  + D I  F K LL  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Subjt:  EESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE

Query:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL
          ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Subjt:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL

Q9JKB8 Pre-mRNA-splicing factor 18

9.4e-45

34.11

Show/hide

Query:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTD
        MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+   +++ K   Q   ++           SNP+         +              
Subjt:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTD

Query:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGAD
              + L RQEVIRRLR   +P+ LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+          G  E G+    +
Subjt:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGAD

Query:  EESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE
        +      ++ +E  + L       D+  + D I  F K LL  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Subjt:  EESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE

Query:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL
          ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Subjt:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL

Arabidopsis top hits

e value

%identity

Alignment

AT1G03140.1 splicing factor Prp18 family protein

6.3e-153

69.34

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSK--SNPLASASTTSSSVATNSTTTTSKSLTDE
        MDLL++E+LKKR++LA E+GGK+ FKRSEIEQ++IQ+LRE+E+RE E KA R++  +A+  +  S+ S   S+  A+++++ SS +  +    SK+LTDE
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSK--SNPLASASTTSSSVATNSTTTTSKSLTDE

Query:  QNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADE
            NL+LPRQEVIRRLRFLKQP+TLFGEDD +RLDRLK+VLK GLFEVDSD+TEGQTNDFLRDIAEL+KRQK+G++ +RKR+ +++   +EGD G   E
Subjt:  QNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADE

Query:  ESADGG-SSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE
        +   GG SS V+ DKD+KR+KANF++LC+EDKILVF+K+LL EWKQELD M   E+RTAKGK MVATFKQCARYL PLF  CRKK LP DIRQAL+V+V 
Subjt:  ESADGG-SSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE

Query:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEE
         C+KRDYLAAMD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS+KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEE
Subjt:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEE

Query:  RVSGGGK-LGSDERLRIMPAPEDS
        R  GG +   S+ERLR+MP+  +S
Subjt:  RVSGGGK-LGSDERLRIMPAPEDS

AT1G54590.1 INVOLVED IN: RNA splicing

5.8e-90

63.1

Show/hide

Query:  RLDRLKFVLKAGLF-EVDSDLTEGQTNDFLRDIAELRKRQK-TGILSERKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRM-KANFDELCEED
        RLDRLK+VLK GLF EVD+D+T+G+TNDFLRDI EL+KR++ +G++++RKR+   D      +  GA++E             DLK + +ANF++LC+ED
Subjt:  RLDRLKFVLKAGLF-EVDSDLTEGQTNDFLRDIAELRKRQK-TGILSERKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRM-KANFDELCEED

Query:  KILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDQYIKMAIGNAPWPIGVTMV
        KILVF K+LL EWKQEL+ M   E+RTA GK M+ATF QCARYL PLF  CR K LP DIRQ L+V+V C +KRDYL A  Q+IK+AIGNAPWPIGVTMV
Subjt:  KILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDQYIKMAIGNAPWPIGVTMV

Query:  GIHERSAREKIYT-NSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEER-VSGGGKLGSDERLRIMPA
        GIHERSAREKI T +SVAHIMN+ETTRKYLQS+KRLMTFCQRRY  +PSK++EFNSLANGS+L SLLAEER  +   +  S+ERL +MP+
Subjt:  GIHERSAREKIYT-NSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEER-VSGGGKLGSDERLRIMPA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATCTTCTCAAGCAAGAGCTTCTAAAGAAACGTCAAGCCCTAGCCACCGAAACCGGCGGCAAGCGCGTTTTCAAGCGATCCGAAATCGAACAGAGGCAAATCCAACA
GCTACGCGAGAAAGAGAAGCGCGAATTGGAAGCTAAAGCTCTCCGCCAATCCACCACATCCGCTACCGCCGCGGAGGCCGTCTCCACATCTTCTAAATCCAATCCATTAG
CTTCAGCCTCTACCACTTCCTCCTCCGTCGCAACCAACTCTACCACCACCACTTCAAAGTCCCTAACCGACGAGCAGAATATCGACAACCTCGTCCTTCCCAGACAGGAA
GTGATTCGAAGACTCCGGTTTCTGAAACAACCCATTACGCTTTTCGGGGAAGATGATGATGCTCGGCTTGACCGTTTGAAGTTCGTGCTGAAAGCGGGGCTTTTCGAGGT
GGATAGTGATTTGACGGAGGGGCAAACGAATGACTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGGATTTTGAGCGAGAGGAAGAGGCAGAAGAAGG
AGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCTGATGAAGAAAGTGCCGATGGAGGGTCGAGTGGGGTTGAAACTGACAAAGATTTAAAGAGAATGAAAGCTAAT
TTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTAAACGAGTGGAAGCAGGAATTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAA
AGGGAAGTCTATGGTAGCAACATTTAAGCAATGTGCTCGTTATTTACATCCTCTCTTCAAGTTTTGCAGGAAGAAGGTTCTTCCCGATGATATTCGGCAAGCATTGTTGG
TAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCCATAGGAAATGCCCCATGGCCTATTGGTGTCACTATGGTTGGTATT
CACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACTTGCAATCAATCAAGAGATTGATGACGTTCTG
TCAACGGCGCTATCCAACGATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCGAACGGTAGCGACCTGCAATCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGCA
AGCTGGGTTCTGATGAGAGGCTACGAATCATGCCTGCCCCAGAAGATAGCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQE
VIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKAN
FDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGI
HERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS

Cucsat.G2884 (gene) of Cucumber (B10) v3 genome