| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6593155.1 U1 small nuclear ribonucleoprotein C, partial [Cucurbita argyrosperma subsp. sororia] | 1.61e-121 | 92.35 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPVMPG PGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESN
IRPPV PRP+PGAPGYLP PTMPPMMAPPGA +PGQVN+PSRPPPPAP+PGS PQPSSTNGAPL AP TYQANPAAPGSGGYDSFT+MAQPS ESN
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESN
|
|
| XP_004148886.1 U1 small nuclear ribonucleoprotein C [Cucumis sativus] | 6.15e-133 | 100 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
|
|
| XP_008451425.1 PREDICTED: U1 small nuclear ribonucleoprotein C [Cucumis melo] | 5.05e-132 | 98.98 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPV+PGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAP+PGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
|
|
| XP_023515032.1 U1 small nuclear ribonucleoprotein C [Cucurbita pepo subsp. pepo] | 6.56e-121 | 92.86 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPVMPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESN
IRPPV PRP+PGAPGYLP PTMPPMMAPPGA +PGQVNIPSRPPPPAP+PGS QPSSTNGAPL AP TYQANPAAPGSGGYDSFT+MAQPS ESN
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESN
|
|
| XP_038899936.1 U1 small nuclear ribonucleoprotein C isoform X1 [Benincasa hispida] | 2.05e-124 | 93.91 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
IRPPVLPRP+PGAPGYLP PTMPPMMAPPGAP+PGQVNIP+RPPPPAP+PGSAPQPSSTNGAPLA PS YQANPAAPGSGGY+SFT+MAQPS E NH
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K515 U1 small nuclear ribonucleoprotein C | 2.98e-133 | 100 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
|
|
| A0A1S3BS92 U1 small nuclear ribonucleoprotein C | 2.45e-132 | 98.98 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPV+PGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAP+PGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
|
|
| A0A5A7UNW2 U1 small nuclear ribonucleoprotein C | 2.45e-132 | 98.98 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPV+PGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAP+PGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH
|
|
| A0A6J1H7P8 U1 small nuclear ribonucleoprotein C | 9.10e-121 | 92.35 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPVMPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESN
IRPPV PRP+PGAPGYLP PTMPPMMAPPGA +PGQVN+PSRPPPPAP+PGS PQ SSTNGAPL AP TYQANPAAPGSGGYDSFT+MAQPS ESN
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESN
|
|
| A0A6J1KWY5 U1 small nuclear ribonucleoprotein C | 4.51e-121 | 92.35 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPVMPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESN
IRPPV PRP+PGAPGYLP PTMPPMMAPPGA +PGQVN+PSRPPPPAP+PGS QPSSTNGAPL AP TYQANPAAPGSGGYDSFT+MAQPS ESN
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESN
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| C5XYW4 U1 small nuclear ribonucleoprotein C-2 | 2.7e-50 | 59.57 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLG-----QRPRLPVLPTPVMPGAAP
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q GA FNQH+L RPRLP+LPTP MP P
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLG-----QRPRLPVLPTPVMPGAAP
Query: --GLMPGIRPPVLPRP----IPGAPGYLPTPTMPP-MMAPPGAPIPGQVNIPSRPP-------PPAPLPGSAPQPSS-TNGAPL----AAPSTYQANPAA
LMPG+RPP+LP P PGAP +P P PP M PGAP PG + P PP P P P + P P+S GAP+ A P+ YQANP A
Subjt: --GLMPGIRPPVLPRP----IPGAPGYLPTPTMPP-MMAPPGAPIPGQVNIPSRPP-------PPAPLPGSAPQPSS-TNGAPL----AAPSTYQANPAA
Query: PG---SGGYDSFTSMAQPS------SESNH
P SG + + QP+ SE NH
Subjt: PG---SGGYDSFTSMAQPS------SESNH
|
|
| C5XZK6 U1 small nuclear ribonucleoprotein C-1 | 3.9e-49 | 60.09 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLG-----QRPRLPVLPTPVMPGA--
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q GA FNQH+L RPRLP+LPTP MP
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLG-----QRPRLPVLPTPVMPGA--
Query: -APG--LMPGIRPPVLPRP-IPGAPGYLPT---PTMPP-MMAPPGAPIPGQVNIPSRPP-------PPAPLPGSAPQPSS-TNGAPL----AAPSTYQAN
APG LMPG+RPP+LP P IPG PG PT P PP M PGAP PG + P PP P P P + P P+S GAP+ A P+ YQ N
Subjt: -APG--LMPGIRPPVLPRP-IPGAPGYLPT---PTMPP-MMAPPGAPIPGQVNIPSRPP-------PPAPLPGSAPQPSS-TNGAPL----AAPSTYQAN
Query: PAAPG---SGGYDSFTSMAQPS------SESNH
P AP SG + + QP+ SE NH
Subjt: PAAPG---SGGYDSFTSMAQPS------SESNH
|
|
| F6HQ26 U1 small nuclear ribonucleoprotein C | 7.2e-64 | 68.52 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLG-----QRPRLPVLPTPVMP--GA
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAA+NQHL+ RPRLPVLPTP MP G+
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLG-----QRPRLPVLPTPVMP--GA
Query: AP-----GLMPGIRPPVLPRPIPGAPGYLPTPTMPPMMAPPGA---PIPGQVNIPSRPP----PPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGG
AP L+PG+RPPVLPRP+PGAPGY+P P MP MMAPPGA P+P ++P RPP PPA +PGS P+S + YQANPA P SGG
Subjt: AP-----GLMPGIRPPVLPRPIPGAPGYLPTPTMPPMMAPPGA---PIPGQVNIPSRPP----PPAPLPGSAPQPSSTNGAPLAAPSTYQANPAAPGSGG
Query: YDSFTSMAQPSSESNH
+DSF AQ E+NH
Subjt: YDSFTSMAQPSSESNH
|
|
| Q32PA0 U1 small nuclear ribonucleoprotein C | 2.7e-18 | 43.14 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPG-AAPGLMP
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ AAFQQ + P P +PG PG+MP
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPG-AAPGLMP
Query: GIR---PPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPL
PP++P P PG +P P M P G +P P PP P+
Subjt: GIR---PPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPL
|
|
| Q56XE4 U1 small nuclear ribonucleoprotein C | 4.6e-50 | 60.48 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMP-
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ +QQVGA FNQH+L RPR P++ PG MP
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPGAAPGLMP-
Query: GIRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPI-PGQVNIPSRPPPPAPLPGS-------APQPSSTNGAP-----LAAPSTYQANPAAPGSGGYDS-F
G+RPPVLPRP+ GY+P P +P MMAPPGAP+ P N RPP AP+PG AP P G P L P Y NPAAP SG +++
Subjt: GIRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPI-PGQVNIPSRPPPPAPLPGS-------APQPSSTNGAP-----LAAPSTYQANPAAPGSGGYDS-F
Query: TSMAQPSSES
+ PS+ES
Subjt: TSMAQPSSES
|
|
