; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G2910 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2910
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionDNA ligase 1
Genome locationctg1041:5008610..5010764
RNA-Seq ExpressionCucsat.G2910
SyntenyCucsat.G2910
Gene Ontology termsNA
InterPro domainsIPR013730 - Fyv7/TAP26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593160.1 hypothetical protein SDJN03_12636, partial [Cucurbita argyrosperma subsp. sororia]1.32e-9986.39Show/hide
Query:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK
        MK+  GK E   RSKSKFM  NKH N+KRLGGKG S +AFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQN  NERPSSS+V LVEGENE  
Subjt:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK

Query:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FENQTN R G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
XP_004136058.2 uncharacterized protein LOC101216293 [Cucumis sativus]3.85e-124100Show/hide
Query:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK
        MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK
Subjt:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK

Query:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
XP_008451439.1 PREDICTED: uncharacterized protein LOC103492733 [Cucumis melo]3.26e-11695.81Show/hide
Query:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK
        MK+ NGKHEH NRSKSKFMN NKHNNIKRLGGK LSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQ NERPSSSTV LVEGENETK
Subjt:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK

Query:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FENQTN RCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
XP_022960530.1 uncharacterized protein LOC111461241 [Cucurbita moschata]9.32e-10086.39Show/hide
Query:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK
        MK+  GK E   RSKSKFM  NKH N+KRLGGKG S +AFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQN  NERPSSS+V LVEGENE K
Subjt:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK

Query:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FEN+TN R G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
XP_038876713.1 uncharacterized protein LOC120069103 [Benincasa hispida]1.37e-9986.98Show/hide
Query:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK
        MK+  GK E  NRS SKFM + KH N+KRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHV+KYKKLVK+QNQ NERPSSSTV LVE ENETK
Subjt:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK

Query:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIG-ASTNH
        FEN TN R GKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKMFKRTQKGQPVMKYRIEHLLETIG AS  H
Subjt:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIG-ASTNH
TrEMBL top hitse value%identityAlignment
A0A0A0K7L3 Uncharacterized protein1.87e-124100Show/hide
Query:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK
        MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK
Subjt:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK

Query:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
A0A1S3BRH3 uncharacterized protein LOC1034927331.58e-11695.81Show/hide
Query:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK
        MK+ NGKHEH NRSKSKFMN NKHNNIKRLGGK LSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQ NERPSSSTV LVEGENETK
Subjt:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK

Query:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FENQTN RCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
A0A6J1GP14 uncharacterized protein LOC1114558277.13e-9784.74Show/hide
Query:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK
        MK   G+ E  NR KS FM N KH N+KRLGGKGLSLEAFAN KSTTDYYNPALIKKQREFYKNAKHV+KYKKLVKHQN  NERPSSSTV LVEGEN TK
Subjt:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK

Query:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTN
         ENQTN R GKERNKG+PSLQ LYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKM KRTQKGQPVMKYRIEHLL+TIGAS N
Subjt:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTN
A0A6J1H9B9 uncharacterized protein LOC1114612414.51e-10086.39Show/hide
Query:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK
        MK+  GK E   RSKSKFM  NKH N+KRLGGKG S +AFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQN  NERPSSS+V LVEGENE K
Subjt:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK

Query:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FEN+TN R G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
A0A6J1KV89 uncharacterized protein LOC1114978955.26e-9985.34Show/hide
Query:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK
        MK+  GK E   RSKSKF   NKH N+KRLGGKG S +AFANAKSTTDYYNPA IKKQREFYKNAKHVNKYKKLVKHQN  NERPS+STV LVEGENE K
Subjt:  MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETK

Query:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FEN+TN R G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G03180.1 CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink).1.9e-3245.16Show/hide
Query:  HSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFE
        + N  HE     KSK     K  N++RLGG GLSL+ FAN KS  + YNP+LIKKQ+EFYKNAK+V+K++K +K QN P++  +  T  + + +++ K +
Subjt:  HSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFE

Query:  NQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS
         ++N R G         ++ LY++  EE E+ R E+EA+  AKKE +E A++RR   + KM ++T+ GQPVMKYRIEHLLE+I  S
Subjt:  NQTNDRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCATTCCAATGGAAAACACGAACATAACAATCGCTCCAAATCGAAATTCATGAACAACAATAAACACAATAATATTAAACGGTTGGGAGGGAAGGGCCTTTCGCT
TGAGGCATTCGCGAATGCTAAATCAACTACCGATTACTATAATCCAGCTTTGATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAACAAGTATAAGAAGT
TAGTAAAGCATCAGAATCAACCGAATGAGAGGCCTTCTAGCTCTACTGTTACCCTTGTCGAGGGTGAAAATGAAACCAAATTCGAGAATCAGACGAACGATAGATGTGGG
AAAGAAAGGAATAAAGGTGTACCTAGTCTTCAGGCACTGTATGAGAGAAAACATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCAAAAAAGGA
AGAACGAGAAAGGGCTAAGGCTAGACGAAACTCCACAAGAGAAAAAATGTTCAAAAGGACACAAAAAGGTCAGCCAGTTATGAAGTACAGAATTGAGCATCTTTTGGAAA
CTATTGGAGCCTCAACGAACCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCATTCCAATGGAAAACACGAACATAACAATCGCTCCAAATCGAAATTCATGAACAACAATAAACACAATAATATTAAACGGTTGGGAGGGAAGGGCCTTTCGCT
TGAGGCATTCGCGAATGCTAAATCAACTACCGATTACTATAATCCAGCTTTGATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAACAAGTATAAGAAGT
TAGTAAAGCATCAGAATCAACCGAATGAGAGGCCTTCTAGCTCTACTGTTACCCTTGTCGAGGGTGAAAATGAAACCAAATTCGAGAATCAGACGAACGATAGATGTGGG
AAAGAAAGGAATAAAGGTGTACCTAGTCTTCAGGCACTGTATGAGAGAAAACATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCAAAAAAGGA
AGAACGAGAAAGGGCTAAGGCTAGACGAAACTCCACAAGAGAAAAAATGTTCAAAAGGACACAAAAAGGTCAGCCAGTTATGAAGTACAGAATTGAGCATCTTTTGGAAA
CTATTGGAGCCTCAACGAACCACTAA
Protein sequenceShow/hide protein sequence
MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCG
KERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH