| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0053639.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 7.52e-225 | 69.11 | Show/hide |
Query: NWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEV------
WKV D FLPL+LGGVD ILGM+WL+SLG+TEVDWK L+L+F YQG+K++I+GDPSLTK RVSLKNL+K+WG +DQG+LVE R +E C + +E
Subjt: NWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEV------
Query: -LTEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYR
+EE++A +LK+F VF+WP LPP+R I+HHI+LK G NPVNVR YRYA+ QK EME+LV+EMLSSGIIRPS SPY+SPVLLVRKKDG WRFCVDYR
Subjt: -LTEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYR
Query: ALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDIL
ALNNVT+P+KFPIPVIEELFDEL GA +F+K+DLK GYHQIRM +DIEK AFRTHEGHYEF+V+PFGLTNAPSTFQ+LMN VFKP+LR+FVLVFFDDIL
Subjt: ALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDIL
Query: IYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQL
+YS+ + H+ HL+ VL +L++ ELY N +KCSFAK R+ YLGH IS +G+E PEKIRA+ EWP P NVREVRGFLGLTGYYR+ V+ YG IAAPLTQL
Subjt: IYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQL
Query: LKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
LKKG ++W E + AF +L++ MMTLPVLAMPDF++P
Subjt: LKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
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| KAA0061635.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 6.05e-224 | 70.78 | Show/hide |
Query: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEI------SK
+GN KV D FLPLELGGVDAILGM+WL+S+G TEVDWKNLIL+F QG K+ I+GDPSLTK ++SLK ++K W +DQGYLVE RALE+ ++ ++
Subjt: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEI------SK
Query: EVLTEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
TEE + ++ +F DVF+ P LPP+R IEHHI+LK+G +PVNVR YRYA+QQK EME+LV+EML+SGIIR STSPYSSPVLLVRKKDGSWRFCVDY
Subjt: EVLTEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
Query: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
RALNNVTVPDKFPIPV+EELFDELNGA +F+K+DLKAGYHQIRM+ +DIEK FRTHEGHYEFMV+PFGLTNAPSTFQ+LMN VFKPFLR+FVLVFFDDI
Subjt: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
Query: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
LIYS+ ++ H HL+ VLEILR++ELY N KC FAK R+ YLGH IS +G+EVDPEKIRA+KEWP P NVRE+RGFLGLTGYYR+ V++YG+I+APLTQ
Subjt: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
Query: LLKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
LLK G ++WTEE + AF +L++ MMTLPVLAMPDF++P
Subjt: LLKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
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| KAA0066118.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.91e-226 | 71.46 | Show/hide |
Query: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEVL---
+GN KV D FLPLELGGVDAILGM+WL+S+G TEVDWKNLIL+F QG K+ I+GDPSLTK ++SLK ++K W + QGYLVE RALE+ ++
Subjt: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEVL---
Query: ---TEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
TEE +A ++ +F DVF+ P LPP+R IEHHI+LK+GV+PVNVR YRYA+QQK EME+LV+EML+SGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
Subjt: ---TEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
Query: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
RALNNVTVPDKFPIPV+EELFDELNGA +F+K+DLKAGYHQIRM+ +DIEK AFRTHEGHYEFMV+PFGLTNAPSTFQ+LMN VFKPFLR+FVLVFFDDI
Subjt: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
Query: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
LIYS+ ++ H HL+ VLEILR++ELY N KC FAK R+ YLGH IS +G+EVDPEKIRA+KEWP P NVRE+RGFLGLTGYYR+ V++YG+I+APLTQ
Subjt: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
Query: LLKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
LLK G ++WTEE + AF +L++ MMTLPVLAMPDF++P
Subjt: LLKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
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| KAA0067256.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.98e-228 | 71.33 | Show/hide |
Query: NWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRA-----LERCEISKEVL
WKV D FLPL+LGGVD ILGM+WL+SLG+TEVDWK L+L+F YQG+KI+IRGDPSLTK RVSLKNL+K+WG EDQG+LVE R LE E +E
Subjt: NWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRA-----LERCEISKEVL
Query: TE-EESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRA
E EE +A +LK+F VF+WP TLPP+R I HHI+LK G +PVNVR YRYA+ QK EME+LV+EMLSSGIIRPS SPYS PVLLVRKKDGSWRFCVDYRA
Subjt: TE-EESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRA
Query: LNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDILI
LNNVT+PDKFPIPVIEELFD+L GA +F+K+DLK GYHQIRM DDIEK AFRTHEGHYEF+V+PFGLTNAPSTFQ+LMN VFKP+LR+FVLVFFDDIL+
Subjt: LNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDILI
Query: YSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQLL
YS+ ++ H+ HL+ VL +L++ ELY N +KCSFAK R+ YLGH IS +G+E DPEKIRA+ EWP P NVREVRGFLGLTGYYR+ V+ YG IAAPLTQLL
Subjt: YSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQLL
Query: KKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
KKG ++W EA+ AF +L++ MMTLPVLAMPDF++P
Subjt: KKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
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| TYK15157.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.66e-227 | 71.46 | Show/hide |
Query: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEVL---
+GN KV D FLPLELGGVDAILGM+WL+S+G TEVDWKNLIL+F QG K+ I+GDPSLTK ++SLK ++K W + QGYLVE RALE+ ++
Subjt: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEVL---
Query: ---TEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
TEE +A ++ +F DVF+ P LPP+R IEHHI+LK+GV+PVNVR YRYA+QQK EME+LV+EML+SGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
Subjt: ---TEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
Query: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
RALNNVTVPDKFPIPV+EELFDELNGA +F+K+DLKAGYHQIRM+ +DIEK AFRTHEGHYEFMV+PFGLTNAPSTFQ+LMN VFKPFLR+FVLVFFDDI
Subjt: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
Query: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
LIYS+ ++ H HL+ VLEILR++ELY N KC FAK R+ YLGH IS +G+EVDPEKIRA+KEWP P NVRE+RGFLGLTGYYR+ V++YG+I+APLTQ
Subjt: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
Query: LLKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
LLK G ++WTEE + AF +L++ MMTLPVLAMPDF++P
Subjt: LLKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UJK0 Ty3/gypsy retrotransposon protein | 3.64e-225 | 69.11 | Show/hide |
Query: NWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEV------
WKV D FLPL+LGGVD ILGM+WL+SLG+TEVDWK L+L+F YQG+K++I+GDPSLTK RVSLKNL+K+WG +DQG+LVE R +E C + +E
Subjt: NWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEV------
Query: -LTEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYR
+EE++A +LK+F VF+WP LPP+R I+HHI+LK G NPVNVR YRYA+ QK EME+LV+EMLSSGIIRPS SPY+SPVLLVRKKDG WRFCVDYR
Subjt: -LTEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYR
Query: ALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDIL
ALNNVT+P+KFPIPVIEELFDEL GA +F+K+DLK GYHQIRM +DIEK AFRTHEGHYEF+V+PFGLTNAPSTFQ+LMN VFKP+LR+FVLVFFDDIL
Subjt: ALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDIL
Query: IYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQL
+YS+ + H+ HL+ VL +L++ ELY N +KCSFAK R+ YLGH IS +G+E PEKIRA+ EWP P NVREVRGFLGLTGYYR+ V+ YG IAAPLTQL
Subjt: IYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQL
Query: LKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
LKKG ++W E + AF +L++ MMTLPVLAMPDF++P
Subjt: LKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
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| A0A5A7V707 Ty3/gypsy retrotransposon protein | 2.93e-224 | 70.78 | Show/hide |
Query: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEI------SK
+GN KV D FLPLELGGVDAILGM+WL+S+G TEVDWKNLIL+F QG K+ I+GDPSLTK ++SLK ++K W +DQGYLVE RALE+ ++ ++
Subjt: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEI------SK
Query: EVLTEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
TEE + ++ +F DVF+ P LPP+R IEHHI+LK+G +PVNVR YRYA+QQK EME+LV+EML+SGIIR STSPYSSPVLLVRKKDGSWRFCVDY
Subjt: EVLTEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
Query: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
RALNNVTVPDKFPIPV+EELFDELNGA +F+K+DLKAGYHQIRM+ +DIEK FRTHEGHYEFMV+PFGLTNAPSTFQ+LMN VFKPFLR+FVLVFFDDI
Subjt: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
Query: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
LIYS+ ++ H HL+ VLEILR++ELY N KC FAK R+ YLGH IS +G+EVDPEKIRA+KEWP P NVRE+RGFLGLTGYYR+ V++YG+I+APLTQ
Subjt: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
Query: LLKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
LLK G ++WTEE + AF +L++ MMTLPVLAMPDF++P
Subjt: LLKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
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| A0A5A7VEI2 Ty3/gypsy retrotransposon protein | 2.38e-226 | 71.46 | Show/hide |
Query: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEVL---
+GN KV D FLPLELGGVDAILGM+WL+S+G TEVDWKNLIL+F QG K+ I+GDPSLTK ++SLK ++K W + QGYLVE RALE+ ++
Subjt: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEVL---
Query: ---TEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
TEE +A ++ +F DVF+ P LPP+R IEHHI+LK+GV+PVNVR YRYA+QQK EME+LV+EML+SGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
Subjt: ---TEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
Query: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
RALNNVTVPDKFPIPV+EELFDELNGA +F+K+DLKAGYHQIRM+ +DIEK AFRTHEGHYEFMV+PFGLTNAPSTFQ+LMN VFKPFLR+FVLVFFDDI
Subjt: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
Query: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
LIYS+ ++ H HL+ VLEILR++ELY N KC FAK R+ YLGH IS +G+EVDPEKIRA+KEWP P NVRE+RGFLGLTGYYR+ V++YG+I+APLTQ
Subjt: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
Query: LLKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
LLK G ++WTEE + AF +L++ MMTLPVLAMPDF++P
Subjt: LLKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
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| A0A5A7VLC6 Ty3/gypsy retrotransposon protein | 1.93e-228 | 71.33 | Show/hide |
Query: NWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRA-----LERCEISKEVL
WKV D FLPL+LGGVD ILGM+WL+SLG+TEVDWK L+L+F YQG+KI+IRGDPSLTK RVSLKNL+K+WG EDQG+LVE R LE E +E
Subjt: NWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRA-----LERCEISKEVL
Query: TE-EESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRA
E EE +A +LK+F VF+WP TLPP+R I HHI+LK G +PVNVR YRYA+ QK EME+LV+EMLSSGIIRPS SPYS PVLLVRKKDGSWRFCVDYRA
Subjt: TE-EESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRA
Query: LNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDILI
LNNVT+PDKFPIPVIEELFD+L GA +F+K+DLK GYHQIRM DDIEK AFRTHEGHYEF+V+PFGLTNAPSTFQ+LMN VFKP+LR+FVLVFFDDIL+
Subjt: LNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDILI
Query: YSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQLL
YS+ ++ H+ HL+ VL +L++ ELY N +KCSFAK R+ YLGH IS +G+E DPEKIRA+ EWP P NVREVRGFLGLTGYYR+ V+ YG IAAPLTQLL
Subjt: YSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQLL
Query: KKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
KKG ++W EA+ AF +L++ MMTLPVLAMPDF++P
Subjt: KKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
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| A0A5D3CTA1 Ty3/gypsy retrotransposon protein | 1.77e-227 | 71.46 | Show/hide |
Query: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEVL---
+GN KV D FLPLELGGVDAILGM+WL+S+G TEVDWKNLIL+F QG K+ I+GDPSLTK ++SLK ++K W + QGYLVE RALE+ ++
Subjt: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEVL---
Query: ---TEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
TEE +A ++ +F DVF+ P LPP+R IEHHI+LK+GV+PVNVR YRYA+QQK EME+LV+EML+SGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
Subjt: ---TEEESVAVVLKRFDDVFDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDY
Query: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
RALNNVTVPDKFPIPV+EELFDELNGA +F+K+DLKAGYHQIRM+ +DIEK AFRTHEGHYEFMV+PFGLTNAPSTFQ+LMN VFKPFLR+FVLVFFDDI
Subjt: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
Query: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
LIYS+ ++ H HL+ VLEILR++ELY N KC FAK R+ YLGH IS +G+EVDPEKIRA+KEWP P NVRE+RGFLGLTGYYR+ V++YG+I+APLTQ
Subjt: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
Query: LLKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
LLK G ++WTEE + AF +L++ MMTLPVLAMPDF++P
Subjt: LLKKGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.8e-68 | 39.41 | Show/hide |
Query: EEESVAVVLKRFDDV-FDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGS-----WRFCV
E++ + +L+++ D+ + + L +H I+ K + + +Y AY+Q E+E +++ML+ GIIR S SPY+SP+ +V KK + +R +
Subjt: EEESVAVVLKRFDDV-FDWPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGS-----WRFCV
Query: DYRALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFD
DYR LN +TV D+ PIP ++E+ +L FT +DL G+HQI M+ + + K AF T GHYE++ +PFGL NAP+TFQ MN + +P L K LV+ D
Subjt: DYRALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFD
Query: DILIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPL
DI+++S L HL L V E L K L + KC F K +LGH+++ G++ +PEKI AI+++PIP +E++ FLGLTGYYRK + ++ IA P+
Subjt: DILIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPL
Query: TQLLKKGGFRWT--EEAQEAFVRLRRTMMTLPVLAMPDFS
T+ LKK T E AF +L+ + P+L +PDF+
Subjt: TQLLKKGGFRWT--EEAQEAFVRLRRTMMTLPVLAMPDFS
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 2.5e-69 | 35.39 | Show/hide |
Query: DAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEVLTEEESVAV--VLKRFDDV-FD
D ++G K L + + +++KN ++ Q K+I S + ++ ++ DQ + + L+ + + L +EE+ + +L +F ++ +
Subjt: DAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEVLTEEESVAV--VLKRFDDV-FD
Query: WPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKD-----GSWRFCVDYRALNNVTVPDKFPIPV
E L I+H ++ +P+ + Y A + E+E V+EML+ G+IR S SPY+SP +V KK +R +DYR LN +T+PD++PIP
Subjt: WPETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKD-----GSWRFCVDYRALNNVTVPDKFPIPV
Query: IEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDILIYSRDLKAHLDHLKA
++E+ +L FT +DL G+HQI M+ + I K AF T GHYE++ +PFGL NAP+TFQ MN + +P L K LV+ DDI+I+S L HL+ ++
Subjt: IEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDILIYSRDLKAHLDHLKA
Query: VLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQLLKKGGFRWTEEAQ--
V L L + KC F K +LGHI++ G++ +P K++AI +PIP +E+R FLGLTGYYRK + +Y IA P+T LKK T++ +
Subjt: VLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQLLKKGGFRWTEEAQ--
Query: EAFVRLRRTMMTLPVLAMPDF
EAF +L+ ++ P+L +PDF
Subjt: EAFVRLRRTMMTLPVLAMPDF
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.0e-62 | 41.8 | Show/hide |
Query: LPPRRV------IEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEE
LPPR ++H I +K G ++ Y + + E+ K+V+++L + I PS SP SSPV+LV KKDG++R CVDYR LN T+ D FP+P I+
Subjt: LPPRRV------IEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEE
Query: LFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDILIYSRDLKAHLDHLKAVLE
L + A IFT LDL +GYHQI M D K AF T G YE+ V+PFGL NAPSTF M F+ +FV V+ DDILI+S + H HL VLE
Subjt: LFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDILIYSRDLKAHLDHLKAVLE
Query: ILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQLLKKGGFRWTEEAQEAFVR
L+ L V KKKC FA E+LG+ I + + K AI+++P P V++ + FLG+ YYR+ + + IA P+ QL +WTE+ +A +
Subjt: ILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQLLKKGGFRWTEEAQEAFVR
Query: LRRTMMTLPVL
L+ + PVL
Subjt: LRRTMMTLPVL
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 6.5e-65 | 34.44 | Show/hide |
Query: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEVLTEE
+GN I F+ L D I+G L L VD KN L + G KI P L +A +++ L+ A E + ++E+L
Subjt: IGNWKVIDEFLPLELGGVDAILGMKWLNSLGITEVDWKNLILSFMYQGKKIIIRGDPSLTKARVSLKNLVKTWGEEDQGYLVEYRALERCEISKEVLTEE
Query: ESVAVVLKRFDDVFDWP-ETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKK-----DGSWRFCVDY
+L F +F+ P + ++ I +P+ ++Y Y + E+E+ ++E+L GIIRPS SPY+SP+ +V KK + +R VD+
Subjt: ESVAVVLKRFDDVFDWP-ETLPPRRVIEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKK-----DGSWRFCVDY
Query: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
+ LN VT+PD +PIP I L A FT LDL +G+HQI M DI K AF T G YEF+ +PFGL NAP+ FQ +++ + + + K V+ DDI
Subjt: RALNNVTVPDKFPIPVIEELFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDI
Query: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
+++S D H +L+ VL L K L VN +K F +VE+LG+I++ G++ DP+K+RAI E P P +V+E++ FLG+T YYRK ++ Y +A PLT
Subjt: LIYSRDLKAHLDHLKAVLEILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQ
Query: LLK------------KGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
L + K E A ++F L+ + + +LA P F+ P
Subjt: LLK------------KGGFRWTEEAQEAFVRLRRTMMTLPVLAMPDFSIP
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.8e-62 | 41.8 | Show/hide |
Query: LPPRRV------IEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEE
LPPR ++H I +K G ++ Y + + E+ K+V+++L + I PS SP SSPV+LV KKDG++R CVDYR LN T+ D FP+P I+
Subjt: LPPRRV------IEHHIHLKEGVNPVNVRTYRYAYQQKTEMEKLVEEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEE
Query: LFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDILIYSRDLKAHLDHLKAVLE
L + A IFT LDL +GYHQI M D K AF T G YE+ V+PFGL NAPSTF M F+ +FV V+ DDILI+S + H HL VLE
Subjt: LFDELNGAVIFTKLDLKAGYHQIRMNADDIEKIAFRTHEGHYEFMVIPFGLTNAPSTFQSLMNAVFKPFLRKFVLVFFDDILIYSRDLKAHLDHLKAVLE
Query: ILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQLLKKGGFRWTEEAQEAFVR
L+ L V KKKC FA E+LG+ I + + K AI+++P P V++ + FLG+ YYR+ + + IA P+ QL +WTE+ +A +
Subjt: ILRKNELYVNKKKCSFAKARVEYLGHIISGRGVEVDPEKIRAIKEWPIPVNVREVRGFLGLTGYYRKVVRHYGTIAAPLTQLLKKGGFRWTEEAQEAFVR
Query: LRRTMMTLPVL
L+ + PVL
Subjt: LRRTMMTLPVL
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