; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G3217 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G3217
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionCDT1-like protein b
Genome locationctg1041:2757886..2762989
RNA-Seq ExpressionCucsat.G3217
SyntenyCucsat.G3217
Gene Ontology termsGO:0000076 - DNA replication checkpoint (biological process)
GO:0000278 - mitotic cell cycle (biological process)
GO:0030174 - regulation of DNA-dependent DNA replication initiation (biological process)
GO:0071163 - DNA replication preinitiation complex assembly (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0070182 - DNA polymerase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151978.3 CDT1-like protein a, chloroplastic [Cucumis sativus]8.16e-1973.61Show/hide
Query:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSH
        RFSY+HLAQLKFIL + IM KKVV+FDE TSCMK  LHISFNFGVL ESKEDQYMQ         SEFVSSH
Subjt:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSH
XP_008447443.1 PREDICTED: CDT1-like protein a, chloroplastic [Cucumis melo]7.24e-1870.83Show/hide
Query:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSH
        RFSYNHLAQLKFIL + IM KKVV+FDE TSCMK  LHISFNF +L ESKEDQYMQ         SEF SSH
Subjt:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSH
XP_031737520.1 CDT1-like protein a, chloroplastic [Cucumis sativus]8.16e-1973.61Show/hide
Query:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSH
        RFSY+HLAQLKFIL + IM KKVV+FDE TSCMK  LHISFNFGVL ESKEDQYMQ         SEFVSSH
Subjt:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSH
XP_031744272.1 uncharacterized protein LOC116404966 isoform X1 [Cucumis sativus]1.37e-3090.62Show/hide
Query:  VESKEDQYMQSEFVSSHILSFLTRFGRIYWSSEVNVKQWIDIGLSVWLVEKSLLQCTNFRLVST
        VESKEDQYMQSEFVSSHI     RFGRIYWSSEVNVKQWIDIG SVWLVEKSLLQCTNFRLVST
Subjt:  VESKEDQYMQSEFVSSHILSFLTRFGRIYWSSEVNVKQWIDIGLSVWLVEKSLLQCTNFRLVST
XP_031744273.1 uncharacterized protein LOC116404966 isoform X2 [Cucumis sativus]5.40e-3090.48Show/hide
Query:  ESKEDQYMQSEFVSSHILSFLTRFGRIYWSSEVNVKQWIDIGLSVWLVEKSLLQCTNFRLVST
        ESKEDQYMQSEFVSSHI     RFGRIYWSSEVNVKQWIDIG SVWLVEKSLLQCTNFRLVST
Subjt:  ESKEDQYMQSEFVSSHILSFLTRFGRIYWSSEVNVKQWIDIGLSVWLVEKSLLQCTNFRLVST
TrEMBL top hitse value%identityAlignment
A0A0A0L7I7 CDT1 domain-containing protein3.09e-1770.83Show/hide
Query:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSH
        RFSY+HLAQLKFIL + IM KKVV+F   TSCMK  LHISFNFGVL ESKEDQYMQ         SEFVSSH
Subjt:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSH
A0A1S3BGW9 CDT1-like protein a, chloroplastic3.51e-1870.83Show/hide
Query:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSH
        RFSYNHLAQLKFIL + IM KKVV+FDE TSCMK  LHISFNF +L ESKEDQYMQ         SEF SSH
Subjt:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSH
A0A5A7T8X4 CDT1-like protein a3.51e-1870.83Show/hide
Query:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSH
        RFSYNHLAQLKFIL + IM KKVV+FDE TSCMK  LHISFNF +L ESKEDQYMQ         SEF SSH
Subjt:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSH
A0A5A7UUF1 Uncharacterized protein6.22e-1560.81Show/hide
Query:  MRFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSHI
        MRFSY HLAQ KFIL + I+ KKVV++DE TSCMK  LHISFNFGVL  ++EDQYMQ         S+F+SS++
Subjt:  MRFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSHI
A0A5D3CR97 CDT1-like protein b3.67e-1560.81Show/hide
Query:  MRFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSHI
        MRFSY HLAQ KFIL + I+ KKVV++DE TSCMK  LHISFNFGVL  ++EDQYMQ         S+F+SS++
Subjt:  MRFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQ---------SEFVSSHI
SwissProt top hitse value%identityAlignment
Q9SJW9 CDT1-like protein a, chloroplastic4.3e-0554.76Show/hide
Query:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFN
        RF Y+HLAQ+K IL + I  K+V+I DE T CMK  LH++ N
Subjt:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFN
Arabidopsis top hitse value%identityAlignment
AT2G31270.1 homolog of yeast CDT1 A3.0e-0654.76Show/hide
Query:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFN
        RF Y+HLAQ+K IL + I  K+V+I DE T CMK  LH++ N
Subjt:  RFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFN
AT3G54710.1 homolog of yeast CDT1 B homolog of yeast CDT1 B9.8e-0550Show/hide
Query:  FSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLV
        FSY+HLAQ+K I  + I  K+V+ F E T CMK  LHI  N   +V
Subjt:  FSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTTTTCATACAATCATTTGGCTCAATTGAAGTTTATTTTAACTAAAGAAATTATGTTTAAGAAAGTTGTGATCTTTGATGAGTGTACCAGCTGCATGAAGCTATA
TCTTCATATTTCTTTCAATTTTGGCGTCCTAGTAGAGAGTAAGGAGGATCAGTATATGCAATCAGAATTTGTGAGTTCCCATATCCTGAGTTTTCTTACTAGGTTTGGAA
GAATCTATTGGAGCAGTGAAGTCAACGTGAAACAATGGATTGATATAGGACTTTCTGTATGGTTGGTAGAAAAATCTTTGTTACAATGTACGAATTTTAGGCTTGTTAGT
ACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTTTTCATACAATCATTTGGCTCAATTGAAGTTTATTTTAACTAAAGAAATTATGTTTAAGAAAGTTGTGATCTTTGATGAGTGTACCAGCTGCATGAAGCTATA
TCTTCATATTTCTTTCAATTTTGGCGTCCTAGTAGAGAGTAAGGAGGATCAGTATATGCAATCAGAATTTGTGAGTTCCCATATCCTGAGTTTTCTTACTAGGTTTGGAA
GAATCTATTGGAGCAGTGAAGTCAACGTGAAACAATGGATTGATATAGGACTTTCTGTATGGTTGGTAGAAAAATCTTTGTTACAATGTACGAATTTTAGGCTTGTTAGT
ACCTAA
Protein sequenceShow/hide protein sequence
MRFSYNHLAQLKFILTKEIMFKKVVIFDECTSCMKLYLHISFNFGVLVESKEDQYMQSEFVSSHILSFLTRFGRIYWSSEVNVKQWIDIGLSVWLVEKSLLQCTNFRLVS
T