; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G3447 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G3447
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionTail fiber
Genome locationctg1041:7392810..7395537
RNA-Seq ExpressionCucsat.G3447
SyntenyCucsat.G3447
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058769.1 hypothetical protein E6C27_scaffold339G002430 [Cucumis melo var. makuwa]9.13e-12988.89Show/hide
Query:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS
        MGSS RWATTIS+TASSLYFLIILFQIPLFRVRCRG LCTTPLELTCSQLLASEVFR S+VKGVLYPGAIAKAIFNNKPIPPF SLPKLYKFI TPSPL+
Subjt:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS

Query:  SDLHRLE------------VIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTL
        SDLHRLE            VIAGSYLAVGGG+MGMVRAGGGRMSLFGCLIT+WGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTL
Subjt:  SDLHRLE------------VIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTL

Query:  KPQYNPFSSSNKPKRK
        KPQ NPFS SNKPKRK
Subjt:  KPQYNPFSSSNKPKRK

TYK10563.1 hypothetical protein E5676_scaffold459G002170 [Cucumis melo var. makuwa]9.37e-12788.07Show/hide
Query:  MGSSKRWATTISTTASSLYFLIILFQIPLFR--VRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSP
        MGSS RWATTIS+TASSLYFLIILFQIPLFR  VRCRG LCTTPLELTCSQLLASEVFR S+VKGVLYPGAIAKAIFNNKPIPPF SLPKLYKFI TPSP
Subjt:  MGSSKRWATTISTTASSLYFLIILFQIPLFR--VRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSP

Query:  LSSDLHRLE------------VIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVR
        L+SDLHRLE            VIAGSYLAVGGG+MGMVRAGGGRMSLFGCLIT+WGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVR
Subjt:  LSSDLHRLE------------VIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVR

Query:  TLKPQYNPFSSSNKPKRK
        TLKPQ NPFS SNKPKRK
Subjt:  TLKPQYNPFSSSNKPKRK

XP_008461086.1 PREDICTED: uncharacterized protein LOC103499782 [Cucumis melo]1.86e-13294.12Show/hide
Query:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS
        MGSS RWATTIS+TASSLYFLIILFQIPLFRVRCRG LCTTPLELTCSQLLASEVFR S+VKGVLYPGAIAKAIFNNKPIPPF SLPKLYKFI TPSPL+
Subjt:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS

Query:  SDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLKPQYNPFSSSNK
        SDLHRLEVIAGSYLAVGGG+MGMVRAGGGRMSLFGCLIT+WGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLKPQ NPFS SNK
Subjt:  SDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLKPQYNPFSSSNK

Query:  PKRK
        PKRK
Subjt:  PKRK

XP_011659532.1 uncharacterized protein LOC101222216 [Cucumis sativus]3.82e-141100Show/hide
Query:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS
        MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS
Subjt:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS

Query:  SDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLKPQYNPFSSSNK
        SDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLKPQYNPFSSSNK
Subjt:  SDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLKPQYNPFSSSNK

Query:  PKRK
        PKRK
Subjt:  PKRK

XP_038898492.1 uncharacterized protein LOC120086115 [Benincasa hispida]5.76e-11885.99Show/hide
Query:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIH---TPS
        MGSSKRWATTIS TASSLYF++I FQIPLFRV CRG LCTTPLELTCSQLLASE F   +VK +LYPGAIAKAIF NKPIPPF SLPKLYKFIH   T S
Subjt:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIH---TPS

Query:  PLSSDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLKPQYNPFSS
        PL+SDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLI +WGIVWRKSSYLNPNKE  ISQIYPTMFL LLLAF+SVRKDVRRIVRTLKPQ NP SS
Subjt:  PLSSDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLKPQYNPFSS

Query:  SNKPKRK
        SNK KRK
Subjt:  SNKPKRK

TrEMBL top hitse value%identityAlignment
A0A0A0K6D6 Uncharacterized protein9.10e-13894.44Show/hide
Query:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS
        MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS
Subjt:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS

Query:  SDLHRLE------------VIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTL
        SDLHRLE            VIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTL
Subjt:  SDLHRLE------------VIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTL

Query:  KPQYNPFSSSNKPKRK
        KPQYNPFSSSNKPKRK
Subjt:  KPQYNPFSSSNKPKRK

A0A1S3CDX1 uncharacterized protein LOC1034997829.02e-13394.12Show/hide
Query:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS
        MGSS RWATTIS+TASSLYFLIILFQIPLFRVRCRG LCTTPLELTCSQLLASEVFR S+VKGVLYPGAIAKAIFNNKPIPPF SLPKLYKFI TPSPL+
Subjt:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS

Query:  SDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLKPQYNPFSSSNK
        SDLHRLEVIAGSYLAVGGG+MGMVRAGGGRMSLFGCLIT+WGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLKPQ NPFS SNK
Subjt:  SDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLKPQYNPFSSSNK

Query:  PKRK
        PKRK
Subjt:  PKRK

A0A5A7UZ20 Uncharacterized protein4.42e-12988.89Show/hide
Query:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS
        MGSS RWATTIS+TASSLYFLIILFQIPLFRVRCRG LCTTPLELTCSQLLASEVFR S+VKGVLYPGAIAKAIFNNKPIPPF SLPKLYKFI TPSPL+
Subjt:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS

Query:  SDLHRLE------------VIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTL
        SDLHRLE            VIAGSYLAVGGG+MGMVRAGGGRMSLFGCLIT+WGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTL
Subjt:  SDLHRLE------------VIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTL

Query:  KPQYNPFSSSNKPKRK
        KPQ NPFS SNKPKRK
Subjt:  KPQYNPFSSSNKPKRK

A0A5D3CFA3 Uncharacterized protein4.54e-12788.07Show/hide
Query:  MGSSKRWATTISTTASSLYFLIILFQIPLFR--VRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSP
        MGSS RWATTIS+TASSLYFLIILFQIPLFR  VRCRG LCTTPLELTCSQLLASEVFR S+VKGVLYPGAIAKAIFNNKPIPPF SLPKLYKFI TPSP
Subjt:  MGSSKRWATTISTTASSLYFLIILFQIPLFR--VRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSP

Query:  LSSDLHRLE------------VIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVR
        L+SDLHRLE            VIAGSYLAVGGG+MGMVRAGGGRMSLFGCLIT+WGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVR
Subjt:  LSSDLHRLE------------VIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVR

Query:  TLKPQYNPFSSSNKPKRK
        TLKPQ NPFS SNKPKRK
Subjt:  TLKPQYNPFSSSNKPKRK

A0A6J1JWG5 uncharacterized protein LOC1114885011.88e-9270.23Show/hide
Query:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGAL-------CTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFI
        M SSK+WATTIS TASSLYFL+I  Q+PLFRV CRG+        CTTPLELTCSQLL+S+VF A +V+ +LYPGAIAKAIF NKPIP F+SLPK+YKFI
Subjt:  MGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGAL-------CTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFI

Query:  HTP----SPLSSDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLK
               SP +SDLHRLEVIAGSYLAVGG MMGMVR G GRMSLFGCL+ +WGIVWRKSSY N NK+   S++YPTMFL +LLAFLSVRKDVRRIVR +K
Subjt:  HTP----SPLSSDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLK

Query:  PQYNPFSSSNKPKRK
         Q NP S   K KR+
Subjt:  PQYNPFSSSNKPKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80200.1 unknown protein2.8e-3035.75Show/hide
Query:  SSKRWATTISTTASSLYFLIILFQIPLFR-----------------------------VRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKA
        S K+WA+ IS  ASSL+ L+I+FQIPLFR                             V CR   C TPLE+  S+L+A+++  +S+VK +LYPGAI K+
Subjt:  SSKRWATTISTTASSLYFLIILFQIPLFR-----------------------------VRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKA

Query:  IFNNKPIPPFKSLPKLYKF--IHTPSPLSSDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVW------RKSSYLNPNKEKEISQIYPT
        +F    IP +  L + Y F  ++  S  ++D+H LEV AGS L + G ++ + +    R++  G L+  WG++           +++P++     ++YPT
Subjt:  IFNNKPIPPFKSLPKLYKF--IHTPSPLSSDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVW------RKSSYLNPNKEKEISQIYPT

Query:  MFLVLLLAFLSVRKDVRRIVR
        +FL  L AFLS+R DVR+I+R
Subjt:  MFLVLLLAFLSVRKDVRRIVR

AT5G11280.1 unknown protein4.4e-3638.94Show/hide
Query:  GSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS-
        G SK W    ++ ASS+YF++ILFQIPLFRV CR  +C++P+ +T SQL++SE+F   ++K +LYPGA+   +  N   P ++++  +Y   +     + 
Subjt:  GSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLPKLYKFIHTPSPLS-

Query:  SDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWR--KSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRT--LKPQYNPFS
        +DL RLEV+AGSY +V G  +G+++   GRMS+FG L+ +WG+V        +N +  K +  +YPTM L ++ AF  ++ D+R+  R    +P   P  
Subjt:  SDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWR--KSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRT--LKPQYNPFS

Query:  SSNKPKRK
        SS+K K K
Subjt:  SSNKPKRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACAAACAGCTTAATATTGGATGGCCATTTTTCTTGTCATGTTCAATAAACCAACATAGTTTCTTGGCTATGGGCTCTTCCAAAAGATGGGCAACCACCATTTCTACCAC
TGCCTCTTCTTTATATTTTCTCATCATTCTCTTCCAAATTCCTCTTTTCAGAGTGAGATGCAGAGGGGCATTATGCACAACGCCACTGGAATTGACATGTTCTCAGTTGT
TAGCAAGCGAGGTGTTTCGTGCATCTATTGTCAAAGGTGTTTTATATCCTGGAGCCATTGCAAAAGCTATCTTTAACAACAAACCCATTCCACCATTTAAAAGCTTGCCA
AAGCTATACAAGTTTATCCATACACCTTCTCCTCTCTCATCGGATCTCCATCGCCTAGAGGTTATTGCAGGAAGTTATTTGGCAGTAGGAGGAGGTATGATGGGAATGGT
TAGAGCAGGGGGAGGGAGAATGAGTCTATTTGGTTGCCTTATTACAATATGGGGCATTGTTTGGAGGAAGTCTTCATATTTAAATCCCAATAAGGAAAAGGAAATAAGCC
AAATCTATCCAACCATGTTTCTTGTTCTACTTTTGGCTTTCTTGTCTGTTAGGAAGGATGTCAGGAGAATAGTACGTACCCTCAAACCTCAATACAATCCTTTCTCTTCG
TCCAACAAACCCAAACGCAAATGA
mRNA sequenceShow/hide mRNA sequence
AACAAACAGCTTAATATTGGATGGCCATTTTTCTTGTCATGTTCAATAAACCAACATAGTTTCTTGGCTATGGGCTCTTCCAAAAGATGGGCAACCACCATTTCTACCAC
TGCCTCTTCTTTATATTTTCTCATCATTCTCTTCCAAATTCCTCTTTTCAGAGTGAGATGCAGAGGGGCATTATGCACAACGCCACTGGAATTGACATGTTCTCAGTTGT
TAGCAAGCGAGGTGTTTCGTGCATCTATTGTCAAAGGTGTTTTATATCCTGGAGCCATTGCAAAAGCTATCTTTAACAACAAACCCATTCCACCATTTAAAAGCTTGCCA
AAGCTATACAAGTTTATCCATACACCTTCTCCTCTCTCATCGGATCTCCATCGCCTAGAGGTTATTGCAGGAAGTTATTTGGCAGTAGGAGGAGGTATGATGGGAATGGT
TAGAGCAGGGGGAGGGAGAATGAGTCTATTTGGTTGCCTTATTACAATATGGGGCATTGTTTGGAGGAAGTCTTCATATTTAAATCCCAATAAGGAAAAGGAAATAAGCC
AAATCTATCCAACCATGTTTCTTGTTCTACTTTTGGCTTTCTTGTCTGTTAGGAAGGATGTCAGGAGAATAGTACGTACCCTCAAACCTCAATACAATCCTTTCTCTTCG
TCCAACAAACCCAAACGCAAATGA
Protein sequenceShow/hide protein sequence
NKQLNIGWPFFLSCSINQHSFLAMGSSKRWATTISTTASSLYFLIILFQIPLFRVRCRGALCTTPLELTCSQLLASEVFRASIVKGVLYPGAIAKAIFNNKPIPPFKSLP
KLYKFIHTPSPLSSDLHRLEVIAGSYLAVGGGMMGMVRAGGGRMSLFGCLITIWGIVWRKSSYLNPNKEKEISQIYPTMFLVLLLAFLSVRKDVRRIVRTLKPQYNPFSS
SNKPKRK