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Cucsat.G3448 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G3448
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionLate embryogenesis abundant protein
Genome locationctg1041:7411131..7411961
RNA-Seq ExpressionCucsat.G3448
SyntenyCucsat.G3448
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461081.1 PREDICTED: late embryogenesis abundant protein D-7 [Cucumis melo]2.35e-6187.5Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEA
        MASHNQSYRAGETKGRAEEKTNQAMG MGEKAREAKEKTYETGRA ++KAHGAADSTKEWASD AQ GREKAQ GKETTGGILEQTGEKVKSMAQGAAEA
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEA

Query:  VKSTFGMA-QHDEDVDK-SSNATTNRRV
        VKSTFGMA Q+D+DVDK +++ TT RRV
Subjt:  VKSTFGMA-QHDEDVDK-SSNATTNRRV

XP_011659535.1 late embryogenesis abundant protein D-7 [Cucumis sativus]1.76e-74100Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEA
        MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEA
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEA

Query:  VKSTFGMAQHDEDVDKSSNATTNRRV
        VKSTFGMAQHDEDVDKSSNATTNRRV
Subjt:  VKSTFGMAQHDEDVDKSSNATTNRRV

XP_022150150.1 late embryogenesis abundant protein Dc3-like [Momordica charantia]3.24e-4972.93Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGA-----------ADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEK
        MA+H+Q +RAGETKGRAEEKTNQ M  MGEKARE K+KTYETGRAAR+KA  +           A +TKE ASDAAQ  REKAQ+GKE TGGILEQTGEK
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGA-----------ADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEK

Query:  VKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATT
        VKSMAQGAA+AVKSTFGMAQHD+DVDK S+ TT
Subjt:  VKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATT

XP_023548700.1 late embryogenesis abundant protein 7 [Cucurbita pepo subsp. pepo]1.92e-5376.26Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWA-----------SDAAQTGREKAQAGKETTGGILEQTGEK
        MASHNQSY+AGETKGRAEEKT+QAMG MG+KAREAKEKTYETG+AA++KAHGAA+STKEWA           SD AQ  REKAQ+GKETTGGILEQTGEK
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWA-----------SDAAQTGREKAQAGKETTGGILEQTGEK

Query:  VKSMAQGAAEAVKSTFGMAQHDEDVDKS---SNATTNRR
        VKSMAQGAAEAVKSTFGMA HD+DV K    S+ TT RR
Subjt:  VKSMAQGAAEAVKSTFGMAQHDEDVDKS---SNATTNRR

XP_038899464.1 LOW QUALITY PROTEIN: late embryogenesis abundant protein 2-like [Benincasa hispida]1.25e-6288.52Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEA
        MASHNQSYRAGETKGRAEEKTN+ MG MG+KAREAKEKTYETGRAAREKAHGAADSTKEWASD AQ  REKAQ+GKETTGGILEQTGEKVKSMAQGAA+A
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEA

Query:  VKSTFGMAQHDEDVDKSSNATT
        VKSTFGMAQHD++VDK S+ TT
Subjt:  VKSTFGMAQHDEDVDKSSNATT

TrEMBL top hitse value%identityAlignment
A0A0A0K6E1 Uncharacterized protein1.34e-9399.35Show/hide
Query:  VTKQAKHTFGKRERKAKVHFIKREGRKMASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQ
        +TKQAKHTFGKRERKAKVHFIKREGRKMASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQ
Subjt:  VTKQAKHTFGKRERKAKVHFIKREGRKMASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQ

Query:  AGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATTNRRV
        AGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATTNRRV
Subjt:  AGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATTNRRV

A0A1S3CEC9 late embryogenesis abundant protein D-71.14e-6187.5Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEA
        MASHNQSYRAGETKGRAEEKTNQAMG MGEKAREAKEKTYETGRA ++KAHGAADSTKEWASD AQ GREKAQ GKETTGGILEQTGEKVKSMAQGAAEA
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEA

Query:  VKSTFGMA-QHDEDVDK-SSNATTNRRV
        VKSTFGMA Q+D+DVDK +++ TT RRV
Subjt:  VKSTFGMA-QHDEDVDK-SSNATTNRRV

A0A5A7UUB6 Late embryogenesis abundant protein D-71.14e-6187.5Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEA
        MASHNQSYRAGETKGRAEEKTNQAMG MGEKAREAKEKTYETGRA ++KAHGAADSTKEWASD AQ GREKAQ GKETTGGILEQTGEKVKSMAQGAAEA
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEA

Query:  VKSTFGMA-QHDEDVDK-SSNATTNRRV
        VKSTFGMA Q+D+DVDK +++ TT RRV
Subjt:  VKSTFGMA-QHDEDVDK-SSNATTNRRV

A0A6J1D7P2 late embryogenesis abundant protein Dc3-like1.57e-4972.93Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGA-----------ADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEK
        MA+H+Q +RAGETKGRAEEKTNQ M  MGEKARE K+KTYETGRAAR+KA  +           A +TKE ASDAAQ  REKAQ+GKE TGGILEQTGEK
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGA-----------ADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEK

Query:  VKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATT
        VKSMAQGAA+AVKSTFGMAQHD+DVDK S+ TT
Subjt:  VKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATT

A0A6J1GPH8 late embryogenesis abundant protein 79.43e-4064.71Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWA-----------SDAAQTGREKAQAGKETTGGILEQTGEK
        MASHNQSY+AGETKGRAEEKT+QAMG MG+KA                  HGAA+STKEWA           SD AQ  REKAQ+GKETTGGILEQTGEK
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWA-----------SDAAQTGREKAQAGKETTGGILEQTGEK

Query:  VKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATTNRR
        VKSMAQGAA+AVKSTFGMA HD+DV K  + TT  R
Subjt:  VKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATTNRR

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 16.6e-1840Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEK--------------------------------------------TYETGRAAREKAHGAADS
        MASH+QSY+AGET GR EEKTNQ +G + +KA+ AKEK                                            T +T +AA++K     ++
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEK--------------------------------------------TYETGRAAREKAHGAADS

Query:  TKEWASDAAQTGREK-----------AQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQHDEDVD
        TKE A D     REK           AQ+GK+ + G L+QTGEKVK MAQGA +AVK TFGMA  D+D D
Subjt:  TKEWASDAAQTGREK-----------AQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQHDEDVD

O49817 Late embryogenesis abundant protein 23.5e-1943.24Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKE---------------------------------KTYETGRAAREKAHGAADSTKEWASDAAQT
        M SH+QSYRAGE KGR EEKTNQ +G + +KA+ AKE                                 KT +T +A +EKA       KE  S+  Q+
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKE---------------------------------KTYETGRAAREKAHGAADSTKEWASDAAQT

Query:  GREKAQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQHDEDVD
         +E AQ+GK+ + G L+QTGEK K MAQGA +AVK TFGM   D+D D
Subjt:  GREKAQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQHDEDVD

P13934 Late embryogenesis abundant protein 768.6e-1844.74Show/hide
Query:  TKQAKHTFGKRERKAKVHFIKREGRKMASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKT----YETGRAAREKAHGAADSTKEWASDAAQTGRE
        T QA  T   +++  +     ++    A+     +A ET   ++EKT+QA     EKARE K+KT     ETG A ++KA  AA  TKE A +AAQ  +E
Subjt:  TKQAKHTFGKRERKAKVHFIKREGRKMASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKT----YETGRAAREKAHGAADSTKEWASDAAQTGRE

Query:  KAQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATT
         A+AGK+ TGG L QTGE VK MA GAA+AVK TFGMA  +ED +     TT
Subjt:  KAQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATT

P13939 Late embryogenesis abundant protein D-71.6e-1948.53Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEK-----------AREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEK
        MASH QSY+AG  +GRA EK  Q   +M EK           A  AK+KT ET  AA++K  GAA++T +     A   R KA+  KET+GGIL+Q GEK
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGAMGEK-----------AREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEK

Query:  VKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATTNRR
        V++ AQGA +AVK TFGMA  DED + +  AT  R+
Subjt:  VKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATTNRR

Q96270 Late embryogenesis abundant protein 72.1e-1942.68Show/hide
Query:  MASH-NQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQ--------------------------
        MASH  QSY+AGET+G+A+EKT +AMG MG+K + AK+KT ET ++A++KAH  A S K+  S AAQT +E+AQ                          
Subjt:  MASH-NQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQ--------------------------

Query:  -------AGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM------AQHDEDVDKSSNATTNR
               AGKE T GIL QTGE+VK MA GA +AVK T G+       +H      ++  TT R
Subjt:  -------AGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM------AQHDEDVDKSSNATTNR

Arabidopsis top hitse value%identityAlignment
AT1G52690.1 Late embryogenesis abundant protein (LEA) family protein1.5e-2042.68Show/hide
Query:  MASH-NQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQ--------------------------
        MASH  QSY+AGET+G+A+EKT +AMG MG+K + AK+KT ET ++A++KAH  A S K+  S AAQT +E+AQ                          
Subjt:  MASH-NQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQ--------------------------

Query:  -------AGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM------AQHDEDVDKSSNATTNR
               AGKE T GIL QTGE+VK MA GA +AVK T G+       +H      ++  TT R
Subjt:  -------AGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM------AQHDEDVDKSSNATTNR

AT1G52690.2 Late embryogenesis abundant protein (LEA) family protein1.5e-2042.68Show/hide
Query:  MASH-NQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQ--------------------------
        MASH  QSY+AGET+G+A+EKT +AMG MG+K + AK+KT ET ++A++KAH  A S K+  S AAQT +E+AQ                          
Subjt:  MASH-NQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQ--------------------------

Query:  -------AGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM------AQHDEDVDKSSNATTNR
               AGKE T GIL QTGE+VK MA GA +AVK T G+       +H      ++  TT R
Subjt:  -------AGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM------AQHDEDVDKSSNATTNR

AT3G15670.1 Late embryogenesis abundant protein (LEA) family protein5.2e-1848.85Show/hide
Query:  REGRKMASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKT----YETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVK
        +E     +     +A ET   A+EKT+QA    G+KAREAK+K      ETG A + KA  AA  TKE A  AAQ  +E A+AG++ TGG L QTGE VK
Subjt:  REGRKMASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKT----YETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVK

Query:  SMAQGAAEAVKSTFGMAQHDEDVDKSSNATT
         MA GAA+AVK TFGMA  +ED +    +TT
Subjt:  SMAQGAAEAVKSTFGMAQHDEDVDKSSNATT

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein2.6e-0936.27Show/hide
Query:  QSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTF
        Q + AG+ +G+A+EK  Q   +  + A+ A +KT +  ++AR+KA     S ++  +D + +  + AQ  +E   G+  QTGE VK+MAQGA + VK++ 
Subjt:  QSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTF

Query:  GM
        GM
Subjt:  GM

AT4G21020.1 Late embryogenesis abundant protein (LEA) family protein2.5e-0428.95Show/hide
Query:  TKQAKHTFGKRERKAKVHFIKREGRKMASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEK----TYETGRAAREKAHGAADSTKEWASDAAQTGRE
        +K A   +  +E+     +  +E  K  ++N   +A +   R ++K N+      +KA + KEK      +T   A+EKA  A +  KE+  D     +E
Subjt:  TKQAKHTFGKRERKAKVHFIKREGRKMASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEK----TYETGRAAREKAHGAADSTKEWASDAAQTGRE

Query:  KAQAGKETTGGILEQTGEKVKSMAQGAAEAVKS-----TFGMAQHDEDVDKS
        KA+  KET  G  E+ GEK K   +GA E+ K+     T  +   +ED +K+
Subjt:  KAQAGKETTGGILEQTGEKVKSMAQGAAEAVKS-----TFGMAQHDEDVDKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTATTAATATGCTCCATTTCCATTTCATTGCTTGTTACAGTCACAAAACAAGCAAAACACACCTTTGGAAAAAGAGAAAGAAAAGCTAAGGTCCATTTCATAAAAAGAGA
GGGAAGAAAAATGGCATCTCACAATCAGAGCTATAGAGCTGGTGAAACCAAGGGACGAGCTGAGGAGAAAACCAATCAAGCGATGGGTGCAATGGGGGAGAAGGCCCGAG
AAGCAAAGGAGAAAACATACGAGACAGGGCGGGCCGCAAGGGAGAAGGCCCATGGAGCAGCGGACTCAACAAAAGAATGGGCCTCAGATGCGGCCCAAACCGGGCGTGAG
AAGGCCCAAGCGGGAAAAGAAACGACGGGAGGGATTCTGGAGCAGACAGGAGAGAAAGTGAAGAGCATGGCACAAGGAGCAGCGGAAGCAGTTAAAAGCACTTTTGGTAT
GGCTCAGCATGATGAGGATGTGGACAAAAGCTCTAACGCCACCACTAATCGTAGGGTTTAA
mRNA sequenceShow/hide mRNA sequence
TTATTAATATGCTCCATTTCCATTTCATTGCTTGTTACAGTCACAAAACAAGCAAAACACACCTTTGGAAAAAGAGAAAGAAAAGCTAAGGTCCATTTCATAAAAAGAGA
GGGAAGAAAAATGGCATCTCACAATCAGAGCTATAGAGCTGGTGAAACCAAGGGACGAGCTGAGGAGAAAACCAATCAAGCGATGGGTGCAATGGGGGAGAAGGCCCGAG
AAGCAAAGGAGAAAACATACGAGACAGGGCGGGCCGCAAGGGAGAAGGCCCATGGAGCAGCGGACTCAACAAAAGAATGGGCCTCAGATGCGGCCCAAACCGGGCGTGAG
AAGGCCCAAGCGGGAAAAGAAACGACGGGAGGGATTCTGGAGCAGACAGGAGAGAAAGTGAAGAGCATGGCACAAGGAGCAGCGGAAGCAGTTAAAAGCACTTTTGGTAT
GGCTCAGCATGATGAGGATGTGGACAAAAGCTCTAACGCCACCACTAATCGTAGGGTTTAA
Protein sequenceShow/hide protein sequence
LLICSISISLLVTVTKQAKHTFGKRERKAKVHFIKREGRKMASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEWASDAAQTGRE
KAQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQHDEDVDKSSNATTNRRV