; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G3540 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G3540
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRNA-binding protein with multiple splicing
Genome locationctg1047:526434..531063
RNA-Seq ExpressionCucsat.G3540
SyntenyCucsat.G3540
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059349.1 RNA-binding protein with multiple splicing [Cucumis melo var. makuwa]2.72e-22199.36Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFFYQI
        MRIQYPF YQI
Subjt:  MRIQYPFFYQI

KAE8646484.1 hypothetical protein Csa_016702 [Cucumis sativus]4.20e-246100Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFFYQIVFFMLAAERYYLFYWYLKIGSCCLTIYVLE
        MRIQYPFFYQIVFFMLAAERYYLFYWYLKIGSCCLTIYVLE
Subjt:  MRIQYPFFYQIVFFMLAAERYYLFYWYLKIGSCCLTIYVLE

TYK03977.1 RNA-binding protein with multiple splicing [Cucumis melo var. makuwa]7.04e-22397.49Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFFYQIVFFMLAAE
        MRIQYPF YQIVF+ ++  
Subjt:  MRIQYPFFYQIVFFMLAAE

XP_004141738.1 RNA-binding protein with multiple splicing 2 [Cucumis sativus]3.05e-21799.67Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG

Query:  MRIQY
        MRIQ+
Subjt:  MRIQY

XP_008462228.1 PREDICTED: RNA-binding protein with multiple splicing [Cucumis melo]1.24e-21699.34Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG

Query:  MRIQY
        MRIQ+
Subjt:  MRIQY

TrEMBL top hitse value%identityAlignment
A0A0A0K6S7 RRM domain-containing protein1.48e-21799.67Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG

Query:  MRIQY
        MRIQ+
Subjt:  MRIQY

A0A1S3CH02 RNA-binding protein with multiple splicing6.00e-21799.34Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG

Query:  MRIQY
        MRIQ+
Subjt:  MRIQY

A0A5A7V0M8 RNA-binding protein with multiple splicing1.32e-22199.36Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFFYQI
        MRIQYPF YQI
Subjt:  MRIQYPFFYQI

A0A5D3BWV1 RNA-binding protein with multiple splicing3.41e-22397.49Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFFYQIVFFMLAAE
        MRIQYPF YQIVF+ ++  
Subjt:  MRIQYPFFYQIVFFMLAAE

A0A6J1GPN3 RNA-binding protein with multiple splicing 2 isoform X11.35e-21095.48Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPP PPPQAA AAPPPIPHPHPPQILVDNP RHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
        FSN Q AIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADA+ YDQSKRLRTGGDYAHT YSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYP

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG
        VPPVP+PAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGL SVQ GFKQMKILRQERHTVCFIEFEDVN ATNVHH+LQGAVIPSSGSVG
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG

Query:  MRIQYPFFYQ
        MRIQYPF YQ
Subjt:  MRIQYPFFYQ

SwissProt top hitse value%identityAlignment
O74452 Cell wall integrity protein scw11.1e-0632.72Show/hide
Query:  GDYAHTGYSSPSPFHAPPPPIWGPH-GYMAPPPPPYDPYGG--YPVPPVPMPAPAPVPAPSS------YVPVQ---NTK---DNPPCNTLFIGNLGENVN
        G  AHT  SS     +P P ++  +  +    PPP  P     YP     +    P  A SS       +P     NT     NPPCNT+++GNL  + +
Subjt:  GDYAHTGYSSPSPFHAPPPPIWGPH-GYMAPPPPPYDPYGG--YPVPPVPMPAPAPVPAPSS------YVPVQ---NTK---DNPPCNTLFIGNLGENVN

Query:  EEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVGMRIQY
        EEEL+ LFS Q G+K++    +    +CF+EFE++  A     +LQG  + SS   G+R+ +
Subjt:  EEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVGMRIQY

Q6ZRY4 RNA-binding protein with multiple splicing 21.3e-1243.68Show/hide
Query:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN
        G    +EVRT+F++GLP D+K REL  L R   GYE S +     +P+GF +F +   A AAK+AL  + FD E+   L  E AK N
Subjt:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN

Q8VC52 RNA-binding protein with multiple splicing 21.0e-1243.68Show/hide
Query:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN
        G    +EVRT+F++GLP D+K REL  L R   GYE S +     +P+GF +F +   A AAK+AL  + FD E+   L  E AK N
Subjt:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN

Q9W6I1 RNA-binding protein with multiple splicing 22.2e-0731.32Show/hide
Query:  NPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVAD
        N G +  +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F +   A AAK+AL  + FD E+   L  E AK N    K  ++A 
Subjt:  NPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVAD

Query:  ASVYDQSKRLRTGGDY-AHTGYSSPSPFHAP-PPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTK
         +  +    L  G  + A   Y        P  P  W P+        P  P+  +  P     A A       Y P + T+
Subjt:  ASVYDQSKRLRTGGDY-AHTGYSSPSPFHAP-PPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTK

Q9YGP5 RNA-binding protein with multiple splicing 21.0e-1242.22Show/hide
Query:  DNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN
        ++   +  +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F N   A AAK+AL  + FD E+   L  E AK N
Subjt:  DNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.0e-2936.96Show/hide
Query:  IHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA
        +  Y+  +   A  PPPPP      +P PI   H    L  +    A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ 
Subjt:  IHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA

Query:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV
        Q A+A   AL  MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+ S   F  P                 Y+  G  P    
Subjt:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV

Query:  PMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSS--GSVGMR
         + A     AP+S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS  G V +R
Subjt:  PMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSS--GSVGMR

Query:  IQY
        +QY
Subjt:  IQY

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.5e-3036.98Show/hide
Query:  IHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA
        +  Y+  +   A  PPPPP      +P PI   H    L  +    A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ 
Subjt:  IHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA

Query:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV
        Q A+A   AL  MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+ S   F  P                 Y+  G  P    
Subjt:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV

Query:  PMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSS--GSVGMR
         + A     AP+S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS  G V +R
Subjt:  PMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSS--GSVGMR

Query:  IQYPFFYQIVF
        +QYP    I+F
Subjt:  IQYPFFYQIVF

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-2836.64Show/hide
Query:  IHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA
        +  Y+  +   A  PPPPP      +P PI   H    L  +    A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ 
Subjt:  IHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA

Query:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV
        Q A+A   AL  MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+ S   F  P                 Y+  G  P    
Subjt:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV

Query:  PMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSS
         + A     AP+S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS
Subjt:  PMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSS

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-2231.67Show/hide
Query:  PHPHPPQ--ILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEM
        PH  PPQ  +L D PG      + T+F++GLP DVK RE+ NL R   G+E+ Q+ +  +G++ + FA F++ +FA+AA + L  + FD ++ S LH E+
Subjt:  PHPHPPQ--ILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEM

Query:  AKKNLFVKR--GIVADASVYDQSKRL-RTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDN-
        A+ N   K   G      + +++K + ++  D +  G S P     P           +  P   D             +     APS+   ++   +  
Subjt:  AKKNLFVKR--GIVADASVYDQSKRL-RTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDN-

Query:  ---PPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVGMRIQY
             C+TLFI NLG N  E+EL+ L S  PGF  +KI  +    V F +FE++  AT+  + LQG ++ SS   GM I+Y
Subjt:  ---PPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVGMRIQY

AT3G21215.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.7e-13680.32Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIP----HPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPM
        MAG GIHPYHQQWP A A  PPPP   ++AAPP  P    HP PP +LVDN  R   DE+RTIFI GLP+DVKEREL NLLRWLPGYEASQVNFKGEKPM
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIP----HPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPM

Query:  GFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWG-PHGYMAPPPPPYDP
        GFALFS AQFA+AAKD LQ MVFDAESKSV+HTEMAKKNLFVKRGIV D++ YDQSKRLRTGGD  H+ Y SPSPFH PPPP+WG PHGYMAP PPPYDP
Subjt:  GFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWG-PHGYMAPPPPPYDP

Query:  YGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPS
        Y GY  PPVPMP P P+ APSSYVPVQN KDNPPCNTLFIGNLGEN+NEEELR L S QPGFKQMKILRQERHTVCFIEFEDVN+ATNVHH+LQGAVIPS
Subjt:  YGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPS

Query:  SGSVGMRIQY
        SGS+GMRIQY
Subjt:  SGSVGMRIQY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTACTGGAATCCACCCGTACCACCAGCAATGGCCTGCCGCCGCCGCCGCCCCTCCTCCTCCTCCTCCACAAGCCGCTGCCGCTGCTCCCCCTCCTATTCCCCA
CCCCCATCCACCTCAGATCCTCGTCGACAACCCCGGCCGCCATGCCTCTGATGAGGTTCGAACTATATTTATAACAGGGCTTCCTGAAGATGTAAAAGAGAGAGAGCTAC
AGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCACAAGTGAATTTCAAAGGTGAAAAGCCTATGGGCTTTGCGCTCTTCTCCAATGCCCAGTTTGCTATTGCTGCG
AAAGATGCCCTCCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCATACTGAGATGGCCAAGAAAAATCTATTTGTTAAACGAGGCATTGTTGCTGATGCGAG
TGTTTACGACCAAAGTAAGCGATTGAGAACAGGTGGTGACTATGCCCACACTGGATATTCAAGTCCATCACCTTTTCATGCCCCTCCACCCCCTATTTGGGGGCCTCATG
GGTATATGGCTCCACCACCTCCTCCATATGATCCTTATGGAGGTTACCCCGTTCCTCCTGTACCTATGCCTGCTCCTGCTCCTGTACCAGCACCTAGCAGCTATGTGCCT
GTTCAGAACACTAAAGATAATCCTCCTTGCAACACCCTGTTTATTGGCAATCTAGGGGAAAATGTAAATGAGGAGGAACTCAGAGGTCTTTTTAGCGTACAACCTGGATT
TAAGCAAATGAAGATTCTGAGGCAGGAAAGGCACACGGTCTGCTTCATTGAGTTTGAAGACGTGAATAACGCCACCAATGTGCATCATAGTTTGCAGGGTGCTGTTATCC
CTAGTTCCGGCTCTGTGGGCATGAGAATACAATATCCTTTTTTTTATCAAATTGTTTTTTTTATGTTAGCCGCAGAACGATATTACCTATTCTACTGGTACTTGAAAATT
GGAAGTTGTTGCCTGACAATCTATGTGTTGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTACTGGAATCCACCCGTACCACCAGCAATGGCCTGCCGCCGCCGCCGCCCCTCCTCCTCCTCCTCCACAAGCCGCTGCCGCTGCTCCCCCTCCTATTCCCCA
CCCCCATCCACCTCAGATCCTCGTCGACAACCCCGGCCGCCATGCCTCTGATGAGGTTCGAACTATATTTATAACAGGGCTTCCTGAAGATGTAAAAGAGAGAGAGCTAC
AGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCACAAGTGAATTTCAAAGGTGAAAAGCCTATGGGCTTTGCGCTCTTCTCCAATGCCCAGTTTGCTATTGCTGCG
AAAGATGCCCTCCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCATACTGAGATGGCCAAGAAAAATCTATTTGTTAAACGAGGCATTGTTGCTGATGCGAG
TGTTTACGACCAAAGTAAGCGATTGAGAACAGGTGGTGACTATGCCCACACTGGATATTCAAGTCCATCACCTTTTCATGCCCCTCCACCCCCTATTTGGGGGCCTCATG
GGTATATGGCTCCACCACCTCCTCCATATGATCCTTATGGAGGTTACCCCGTTCCTCCTGTACCTATGCCTGCTCCTGCTCCTGTACCAGCACCTAGCAGCTATGTGCCT
GTTCAGAACACTAAAGATAATCCTCCTTGCAACACCCTGTTTATTGGCAATCTAGGGGAAAATGTAAATGAGGAGGAACTCAGAGGTCTTTTTAGCGTACAACCTGGATT
TAAGCAAATGAAGATTCTGAGGCAGGAAAGGCACACGGTCTGCTTCATTGAGTTTGAAGACGTGAATAACGCCACCAATGTGCATCATAGTTTGCAGGGTGCTGTTATCC
CTAGTTCCGGCTCTGTGGGCATGAGAATACAATATCCTTTTTTTTATCAAATTGTTTTTTTTATGTTAGCCGCAGAACGATATTACCTATTCTACTGGTACTTGAAAATT
GGAAGTTGTTGCCTGACAATCTATGTGTTGGAGTGA
Protein sequenceShow/hide protein sequence
MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAA
KDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVP
VQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVGMRIQYPFFYQIVFFMLAAERYYLFYWYLKI
GSCCLTIYVLE