; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G356 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G356
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionLOB domain-containing protein
Genome locationctg1:7759565..7760466
RNA-Seq ExpressionCucsat.G356
SyntenyCucsat.G356
Gene Ontology termsGO:0009755 - hormone-mediated signaling pathway (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582565.1 LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. sororia]7.00e-7388.19Show/hide
Query:  MSSRRSGGSCTKGKGGGS-NGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLG
        MSSR  GG C +G GG S NGSGGPCGACKFLRRKC PECIFAPYFDSEQG+THFAAVHKVFGASNVSK+LLHIPEHKRLDAAITICYEAQARVREPV G
Subjt:  MSSRRSGGSCTKGKGGGS-NGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLG

Query:  CVSHIFALQQQAARLQIEISYLQAYLA
        CV+HIFALQQQAARLQ+E+SYLQAYLA
Subjt:  CVSHIFALQQQAARLQIEISYLQAYLA

XP_004134346.1 LOB domain-containing protein 18 [Cucumis sativus]5.33e-84100Show/hide
Query:  MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC
        MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC
Subjt:  MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC

Query:  VSHIFALQQQAARLQIEISYLQAYLAT
        VSHIFALQQQAARLQIEISYLQAYLAT
Subjt:  VSHIFALQQQAARLQIEISYLQAYLAT

XP_008438149.1 PREDICTED: LOB domain-containing protein 18 [Cucumis melo]1.19e-8096.06Show/hide
Query:  MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC
        MSSRRS GSCTKGKGGGSNGSGGPCGACKFLRRKC PECIFAPYFDSEQG+THFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC
Subjt:  MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC

Query:  VSHIFALQQQAARLQIEISYLQAYLAT
        V+HIFALQQQAARLQIEISYLQ YLAT
Subjt:  VSHIFALQQQAARLQIEISYLQAYLAT

XP_022924343.1 LOB domain-containing protein 18-like [Cucurbita moschata]7.00e-7388.19Show/hide
Query:  MSSRRSGGSCTKGKGGGS-NGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLG
        MSSR  GG C +G GG S NGSGGPCGACKFLRRKC PECIFAPYFDSEQG+THFAAVHKVFGASNVSK+LLHIPEHKRLDAAITICYEAQARVREPV G
Subjt:  MSSRRSGGSCTKGKGGGS-NGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLG

Query:  CVSHIFALQQQAARLQIEISYLQAYLA
        CV+HIFALQQQAARLQ+E+SYLQAYLA
Subjt:  CVSHIFALQQQAARLQIEISYLQAYLA

XP_038903049.1 LOB domain-containing protein 18-like [Benincasa hispida]7.54e-7791.34Show/hide
Query:  MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC
        MS R SGGSCT+ KGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSE G+THFAAVHKVFGASNVSKML HIPEHKRLDAAITICYEAQAR+REPV GC
Subjt:  MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC

Query:  VSHIFALQQQAARLQIEISYLQAYLAT
        V+HIFALQQQAARLQ+EISYLQAYLAT
Subjt:  VSHIFALQQQAARLQIEISYLQAYLAT

TrEMBL top hitse value%identityAlignment
A0A0A0L4D4 LOB domain-containing protein2.58e-84100Show/hide
Query:  MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC
        MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC
Subjt:  MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC

Query:  VSHIFALQQQAARLQIEISYLQAYLAT
        VSHIFALQQQAARLQIEISYLQAYLAT
Subjt:  VSHIFALQQQAARLQIEISYLQAYLAT

A0A1S3AVS3 LOB domain-containing protein 185.75e-8196.06Show/hide
Query:  MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC
        MSSRRS GSCTKGKGGGSNGSGGPCGACKFLRRKC PECIFAPYFDSEQG+THFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC
Subjt:  MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC

Query:  VSHIFALQQQAARLQIEISYLQAYLAT
        V+HIFALQQQAARLQIEISYLQ YLAT
Subjt:  VSHIFALQQQAARLQIEISYLQAYLAT

A0A5A7TZR4 LOB domain-containing protein 185.75e-8196.06Show/hide
Query:  MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC
        MSSRRS GSCTKGKGGGSNGSGGPCGACKFLRRKC PECIFAPYFDSEQG+THFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC
Subjt:  MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGC

Query:  VSHIFALQQQAARLQIEISYLQAYLAT
        V+HIFALQQQAARLQIEISYLQ YLAT
Subjt:  VSHIFALQQQAARLQIEISYLQAYLAT

A0A6J1EC58 LOB domain-containing protein 18-like3.39e-7388.19Show/hide
Query:  MSSRRSGGSCTKGKGGGS-NGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLG
        MSSR  GG C +G GG S NGSGGPCGACKFLRRKC PECIFAPYFDSEQG+THFAAVHKVFGASNVSK+LLHIPEHKRLDAAITICYEAQARVREPV G
Subjt:  MSSRRSGGSCTKGKGGGS-NGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLG

Query:  CVSHIFALQQQAARLQIEISYLQAYLA
        CV+HIFALQQQAARLQ+E+SYLQAYLA
Subjt:  CVSHIFALQQQAARLQIEISYLQAYLA

A0A6J1IR96 LOB domain-containing protein 18-like9.08e-7387.4Show/hide
Query:  MSSRRSGGSCTKGKGGGS-NGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLG
        MSSR  GG C +G GG S NGSGGPCGACKFLRRKC PECIFAPYFDSEQG+THFAAVHKVFGASNVSK+LLHIPEHKRLDAAITICYEAQARVREPV G
Subjt:  MSSRRSGGSCTKGKGGGS-NGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLG

Query:  CVSHIFALQQQAARLQIEISYLQAYLA
        CV+HIFALQQQAARLQ+++SYLQAYLA
Subjt:  CVSHIFALQQQAARLQIEISYLQAYLA

SwissProt top hitse value%identityAlignment
O22131 LOB domain-containing protein 185.2e-4773.55Show/hide
Query:  GGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFA
        GG  + G G    G GGPCGACKFLRRKC+P CIFAPYFDSEQGS +FAAVHKVFGASNVSK+LLHIP H+R DA +TICYEAQAR+R+P+ GCV+HIFA
Subjt:  GGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFA

Query:  LQQQAARLQIEISYLQAYLAT
        LQQQ   LQ E+SYLQA+LA+
Subjt:  LQQQAARLQIEISYLQAYLAT

O22132 LOB domain-containing protein 191.2e-3864.1Show/hide
Query:  TKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQ
        T    GG  G  GPCGACKFLRRKC+  C+FAPYFD+EQG+  FAAVHKVFGASN SKMLL +P HKRLDA +T+CYEA AR+R+PV G V H+F+LQ Q
Subjt:  TKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQ

Query:  AARLQIEISYLQAYLAT
           LQ E++++QA L+T
Subjt:  AARLQIEISYLQAYLAT

O81322 LOB domain-containing protein 314.4e-3864.29Show/hide
Query:  GGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQ
        G + G GGPCGACKFLRRKC+ +C+FAPYFDS +G++HF AVHKVFGASN SK+L+ IP  +RLDA +T+ YEA AR+R+PV GCV HIFALQ Q   LQ
Subjt:  GGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQ

Query:  IEISYLQAYLAT
         E++Y+Q  L+T
Subjt:  IEISYLQAYLAT

O81323 LOB domain-containing protein 302.7e-4370.49Show/hide
Query:  SGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIF
        S G+ +   GGG    GGPCGACKFLRRKC+  CIFAPYFDSEQG+ HFAAVHKVFGASNVSK+L H+PEHKR DA ++IC+EAQAR+R+P+ GCVSHI 
Subjt:  SGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIF

Query:  ALQQQAARLQIEISYLQAYLAT
        +LQQQ   LQ E+SYLQA+LAT
Subjt:  ALQQQAARLQIEISYLQAYLAT

Q9SLB7 LOB domain-containing protein 164.9e-3765.77Show/hide
Query:  GGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQ
        G + G+G PCGACKFLRRKC  +CIFAPYF SEQG+  FAA+HKVFGASNVSK+LL++P H R +A +TI YEAQAR+ +PV GCVSHIFALQQQ A LQ
Subjt:  GGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQ

Query:  IEISYLQAYLA
         ++  ++A +A
Subjt:  IEISYLQAYLA

Arabidopsis top hitse value%identityAlignment
AT2G42430.1 lateral organ boundaries-domain 163.5e-3865.77Show/hide
Query:  GGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQ
        G + G+G PCGACKFLRRKC  +CIFAPYF SEQG+  FAA+HKVFGASNVSK+LL++P H R +A +TI YEAQAR+ +PV GCVSHIFALQQQ A LQ
Subjt:  GGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQ

Query:  IEISYLQAYLA
         ++  ++A +A
Subjt:  IEISYLQAYLA

AT2G45410.1 LOB domain-containing protein 198.2e-4064.1Show/hide
Query:  TKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQ
        T    GG  G  GPCGACKFLRRKC+  C+FAPYFD+EQG+  FAAVHKVFGASN SKMLL +P HKRLDA +T+CYEA AR+R+PV G V H+F+LQ Q
Subjt:  TKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQ

Query:  AARLQIEISYLQAYLAT
           LQ E++++QA L+T
Subjt:  AARLQIEISYLQAYLAT

AT2G45420.1 LOB domain-containing protein 183.7e-4873.55Show/hide
Query:  GGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFA
        GG  + G G    G GGPCGACKFLRRKC+P CIFAPYFDSEQGS +FAAVHKVFGASNVSK+LLHIP H+R DA +TICYEAQAR+R+P+ GCV+HIFA
Subjt:  GGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFA

Query:  LQQQAARLQIEISYLQAYLAT
        LQQQ   LQ E+SYLQA+LA+
Subjt:  LQQQAARLQIEISYLQAYLAT

AT4G00210.1 LOB domain-containing protein 313.1e-3964.29Show/hide
Query:  GGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQ
        G + G GGPCGACKFLRRKC+ +C+FAPYFDS +G++HF AVHKVFGASN SK+L+ IP  +RLDA +T+ YEA AR+R+PV GCV HIFALQ Q   LQ
Subjt:  GGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQ

Query:  IEISYLQAYLAT
         E++Y+Q  L+T
Subjt:  IEISYLQAYLAT

AT4G00220.1 Lateral organ boundaries (LOB) domain family protein1.9e-4470.49Show/hide
Query:  SGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIF
        S G+ +   GGG    GGPCGACKFLRRKC+  CIFAPYFDSEQG+ HFAAVHKVFGASNVSK+L H+PEHKR DA ++IC+EAQAR+R+P+ GCVSHI 
Subjt:  SGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIF

Query:  ALQQQAARLQIEISYLQAYLAT
        +LQQQ   LQ E+SYLQA+LAT
Subjt:  ALQQQAARLQIEISYLQAYLAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCGAGGCGGAGTGGTGGAAGTTGCACAAAAGGCAAGGGTGGTGGCAGCAACGGTAGTGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGGAGGAAGTGTATGCC
AGAGTGTATATTTGCACCCTACTTTGACTCCGAACAAGGTTCAACTCATTTTGCAGCTGTGCACAAGGTGTTTGGAGCAAGCAATGTGTCAAAGATGCTTCTACATATTC
CTGAACATAAACGGCTTGATGCAGCTATAACTATATGTTACGAAGCACAAGCTCGAGTCAGAGAGCCAGTTTTGGGCTGTGTTTCTCATATCTTTGCCCTTCAACAACAG
GCTGCAAGGTTGCAAATAGAGATCTCATATTTGCAAGCGTACCTAGCAACA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCGAGGCGGAGTGGTGGAAGTTGCACAAAAGGCAAGGGTGGTGGCAGCAACGGTAGTGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGGAGGAAGTGTATGCC
AGAGTGTATATTTGCACCCTACTTTGACTCCGAACAAGGTTCAACTCATTTTGCAGCTGTGCACAAGGTGTTTGGAGCAAGCAATGTGTCAAAGATGCTTCTACATATTC
CTGAACATAAACGGCTTGATGCAGCTATAACTATATGTTACGAAGCACAAGCTCGAGTCAGAGAGCCAGTTTTGGGCTGTGTTTCTCATATCTTTGCCCTTCAACAACAG
GCTGCAAGGTTGCAAATAGAGATCTCATATTTGCAAGCGTACCTAGCAACA
Protein sequenceShow/hide protein sequence
MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQ
AARLQIEISYLQAYLAT