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Cucsat.G3561 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G3561
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptiontranscription initiation factor TFIID subunit 9
Genome locationctg1047:961441..962715
RNA-Seq ExpressionCucsat.G3561
SyntenyCucsat.G3561
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0043966 - histone H3 acetylation (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0051123 - RNA polymerase II preinitiation complex assembly (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003162 - Transcription initiation factor TAFII31
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575445.1 Transcription initiation factor TFIID subunit 9, partial [Cucurbita argyrosperma subsp. sororia]1.71e-5385.85Show/hide
Query:  SPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP
        SP      +  +G K+MSEGDE+LPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP
Subjt:  SPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP

Query:  RESWLE
        RE  LE
Subjt:  RESWLE

KAG7013987.1 Transcription initiation factor TFIID subunit 9 [Cucurbita argyrosperma subsp. argyrosperma]1.51e-5385.85Show/hide
Query:  SPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP
        SP      +  +G K+MSEGDE+LPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP
Subjt:  SPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP

Query:  RESWLE
        RE  LE
Subjt:  RESWLE

XP_016902840.1 PREDICTED: transcription initiation factor TFIID subunit 9 isoform X1 [Cucumis melo]5.76e-5395.7Show/hide
Query:  SKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE
        SK+MS+GDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRE  LE
Subjt:  SKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE

XP_022953465.1 transcription initiation factor TFIID subunit 9 [Cucurbita moschata]1.82e-5385.85Show/hide
Query:  SPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP
        SP      +  +G K+MSEGDE+LPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP
Subjt:  SPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP

Query:  RESWLE
        RE  LE
Subjt:  RESWLE

XP_022992393.1 transcription initiation factor TFIID subunit 9 [Cucurbita maxima]2.27e-5384.91Show/hide
Query:  SPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP
        SP   +  +  +G K+MSEGDE+LPRDA+IVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP
Subjt:  SPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP

Query:  RESWLE
        RE  LE
Subjt:  RESWLE

TrEMBL top hitse value%identityAlignment
A0A0A0KAU5 Uncharacterized protein1.24e-5297.78Show/hide
Query:  MSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE
        MSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRE  LE
Subjt:  MSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE

A0A1S3CGN5 transcription initiation factor TFIID subunit 9 isoform X23.54e-5296.67Show/hide
Query:  MSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE
        MS+GDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRE  LE
Subjt:  MSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE

A0A1S4E4D8 transcription initiation factor TFIID subunit 9 isoform X12.79e-5395.7Show/hide
Query:  SKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE
        SK+MS+GDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRE  LE
Subjt:  SKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE

A0A6J1GPP8 transcription initiation factor TFIID subunit 98.79e-5485.85Show/hide
Query:  SPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP
        SP      +  +G K+MSEGDE+LPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP
Subjt:  SPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP

Query:  RESWLE
        RE  LE
Subjt:  RESWLE

A0A6J1JZ27 transcription initiation factor TFIID subunit 91.10e-5384.91Show/hide
Query:  SPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP
        SP   +  +  +G K+MSEGDE+LPRDA+IVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP
Subjt:  SPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPP

Query:  RESWLE
        RE  LE
Subjt:  RESWLE

SwissProt top hitse value%identityAlignment
Q16594 Transcription initiation factor TFIID subunit 94.2e-2050.59Show/hide
Query:  EELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE
        + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA KA +D DDV+LAIQ + + SF+ PPPR+  L+
Subjt:  EELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE

Q17QQ4 Transcription initiation factor TFIID subunit 94.2e-2050.59Show/hide
Query:  EELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE
        + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA KA +D DDV+LAIQ + + SF+ PPPR+  L+
Subjt:  EELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE

Q62880 Transcription initiation factor TFIID subunit 9B7.2e-2053.66Show/hide
Query:  PRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE
        PRDA ++  +LK MG+ DYEPRVI+Q LE  +RYV  +L DA++YS HA K  +D DDV+LAIQ + + SF+ PPPR+  L+
Subjt:  PRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE

Q8VI33 Transcription initiation factor TFIID subunit 94.2e-2050.59Show/hide
Query:  EELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE
        + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA KA +D DDV+LAIQ + + SF+ PPPR+  L+
Subjt:  EELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE

Q9SYH2 Transcription initiation factor TFIID subunit 95.3e-3988.64Show/hide
Query:  EGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE
        EG+E++PRDAKIVK+LLKSMGVEDYEPRVIHQFLELWYRYVV+VLTDAQVYSEHA K  IDCDDVKLAIQSKVNFSFSQPPPRE  LE
Subjt:  EGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE

Arabidopsis top hitse value%identityAlignment
AT1G54140.1 TATA binding protein associated factor 21kDa subunit3.8e-4088.64Show/hide
Query:  EGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE
        EG+E++PRDAKIVK+LLKSMGVEDYEPRVIHQFLELWYRYVV+VLTDAQVYSEHA K  IDCDDVKLAIQSKVNFSFSQPPPRE  LE
Subjt:  EGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPRESWLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGAAAAAAGAAAAAAAAAATCAGATTCTATCTCGCGAGTCTCTCCTCTCCCAGCTCTCTCCATATCTCACGCCGTCGCCCAGCCACAGTGCCGCTCCCCCCACTGCAC
CTCCGTCCACGTTACGTTGAAGGGTAGTAAGAAAATGTCTGAGGGAGACGAGGAGTTACCGAGGGATGCTAAAATTGTGAAGACATTGTTGAAATCAATGGGGGTTGAAG
ATTATGAACCACGAGTTATACACCAGTTTCTTGAGCTGTGGTATCGTTATGTTGTTGACGTACTGACAGATGCACAAGTCTATTCGGAGCATGCGGGCAAGGCTGCCATT
GATTGTGATGATGTGAAGCTTGCTATTCAGTCGAAAGTTAATTTCAGCTTCTCGCAACCTCCTCCAAGAGAGAGTTGGCTAGAAACAGGAATAAGATCCCATTGCCAAGG
TCGATTGGTGGGCCTGGTATTGCCCTTCCACCAGATCAAGACACATTGCTCAGTCCCAATTATCAACTGGCAATCCCAAAGAAGCAAGCAGTCGAAACGATGGAGGAAAC
AGAGGAAGACGAAGGTGATGACACAGTTGCTCCATCCCAAGAACCCAGCTCATCAGAAGTACCTCAACAGCATGCCTCACAAAGAGTATCTTTTCCATTGGCAAAACGTT
CAAAAATAA
mRNA sequenceShow/hide mRNA sequence
AAAGAAAAAAGAAAAAAAAAATCAGATTCTATCTCGCGAGTCTCTCCTCTCCCAGCTCTCTCCATATCTCACGCCGTCGCCCAGCCACAGTGCCGCTCCCCCCACTGCAC
CTCCGTCCACGTTACGTTGAAGGGTAGTAAGAAAATGTCTGAGGGAGACGAGGAGTTACCGAGGGATGCTAAAATTGTGAAGACATTGTTGAAATCAATGGGGGTTGAAG
ATTATGAACCACGAGTTATACACCAGTTTCTTGAGCTGTGGTATCGTTATGTTGTTGACGTACTGACAGATGCACAAGTCTATTCGGAGCATGCGGGCAAGGCTGCCATT
GATTGTGATGATGTGAAGCTTGCTATTCAGTCGAAAGTTAATTTCAGCTTCTCGCAACCTCCTCCAAGAGAGAGTTGGCTAGAAACAGGAATAAGATCCCATTGCCAAGG
TCGATTGGTGGGCCTGGTATTGCCCTTCCACCAGATCAAGACACATTGCTCAGTCCCAATTATCAACTGGCAATCCCAAAGAAGCAAGCAGTCGAAACGATGGAGGAAAC
AGAGGAAGACGAAGGTGATGACACAGTTGCTCCATCCCAAGAACCCAGCTCATCAGAAGTACCTCAACAGCATGCCTCACAAAGAGTATCTTTTCCATTGGCAAAACGTT
CAAAAATAA
Protein sequenceShow/hide protein sequence
KEKRKKKSDSISRVSPLPALSISHAVAQPQCRSPHCTSVHVTLKGSKKMSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAI
DCDDVKLAIQSKVNFSFSQPPPRESWLETGIRSHCQGRLVGLVLPFHQIKTHCSVPIINWQSQRSKQSKRWRKQRKTKVMTQLLHPKNPAHQKYLNSMPHKEYLFHWQNV
QK