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Cucsat.G3781 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G3781
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description60S ribosomal protein L23
Genome locationctg105:1328499..1331154
RNA-Seq ExpressionCucsat.G3781
SyntenyCucsat.G3781
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0070180 - large ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR000218 - Ribosomal protein L14P
IPR019972 - Ribosomal protein L14P, conserved site
IPR036853 - Ribosomal protein L14 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9589927.1 putative ribosomal protein L14P [Lupinus albus]1.72e-75100Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMKV
        NAGVIVNPKGEMKV
Subjt:  NAGVIVNPKGEMKV

KAE9612225.1 putative ribosomal protein L14P [Lupinus albus]8.08e-75100Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVNPKGEMK
Subjt:  NAGVIVNPKGEMK

KAG6764590.1 hypothetical protein POTOM_032066 [Populus tomentosa]1.46e-7984.62Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMKVCLLVTLQVPQLLVLLGRSVQICGLGLPVQPMLLLSVTLEFKS
        NAGVIVNPKGEMK    + +Q  QL V L RSV I GLGL VQ M      L FKS
Subjt:  NAGVIVNPKGEMKVCLLVTLQVPQLLVLLGRSVQICGLGLPVQPMLLLSVTLEFKS

KAG9144989.1 hypothetical protein Leryth_017441, partial [Lithospermum erythrorhizon]9.31e-7599.12Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVNPKGEMK
Subjt:  NAGVIVNPKGEMK

PNX86714.1 60S ribosomal protein l23-like, partial [Trifolium pratense]4.32e-75100Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVNPKGEMK
Subjt:  NAGVIVNPKGEMK

TrEMBL top hitse value%identityAlignment
A0A2K3M7F1 60S ribosomal protein l23-like (Fragment)2.09e-75100Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVNPKGEMK
Subjt:  NAGVIVNPKGEMK

A0A6A4NTT9 Putative ribosomal protein L14P8.33e-76100Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMKV
        NAGVIVNPKGEMKV
Subjt:  NAGVIVNPKGEMKV

A0A6A4QD69 Putative ribosomal protein L14P3.91e-75100Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVNPKGEMK
Subjt:  NAGVIVNPKGEMK

A0A6A4QY97 Putative ribosomal protein L14P4.94e-75100Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVNPKGEMK
Subjt:  NAGVIVNPKGEMK

A0A6J1HWG1 60S ribosomal protein L235.10e-75100Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVNPKGEMK
Subjt:  NAGVIVNPKGEMK

SwissProt top hitse value%identityAlignment
P49690 60S ribosomal protein L231.0e-5898.23Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVNPKGEMK
Subjt:  NAGVIVNPKGEMK

Q07760 60S ribosomal protein L235.1e-5896.46Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGSAGNKFRMSLGLPVAAT+NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV+PAV+VRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVN KGEMK
Subjt:  NAGVIVNPKGEMK

Q3T057 60S ribosomal protein L236.6e-5085.84Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVN KGEMK
Subjt:  NAGVIVNPKGEMK

Q6PC14 60S ribosomal protein L233.0e-5086.73Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLPSA VGDMVMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVN KGEMK
Subjt:  NAGVIVNPKGEMK

Q9XEK8 60S ribosomal protein L238.4e-5390.18Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGGS+GNKFRMSLGLPV A VNCADNTGAKNLY+IS  G++GRLNRLP+A VGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEM
        NAGVIVNPKGEM
Subjt:  NAGVIVNPKGEM

Arabidopsis top hitse value%identityAlignment
AT1G04480.1 Ribosomal protein L14p/L23e family protein7.2e-6098.23Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVNPKGEMK
Subjt:  NAGVIVNPKGEMK

AT2G33370.1 Ribosomal protein L14p/L23e family protein7.2e-6098.23Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVNPKGEMK
Subjt:  NAGVIVNPKGEMK

AT3G04400.1 Ribosomal protein L14p/L23e family protein7.2e-6098.23Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
        MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFED

Query:  NAGVIVNPKGEMK
        NAGVIVNPKGEMK
Subjt:  NAGVIVNPKGEMK

AT3G04400.2 Ribosomal protein L14p/L23e family protein5.6e-52100Show/hide
Query:  MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMK
        MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMK
Subjt:  MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMK

ATCG00780.1 ribosomal protein L144.5e-0935.16Show/hide
Query:  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMK
        +N ADN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AVIVR  K  +R +G  + ++DNA V+++ +G  K
Subjt:  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGCGAGGGCGCGGAGGATCTGCTGGTAACAAGTTCAGGATGTCACTGGGTCTACCGGTGGCAGCGACCGTCAATTGTGCCGACAACACGGGAGCCAAGAACTT
GTACATCATCTCAGTTAAGGGTATCAAGGGGCGTCTGAACAGATTGCCATCGGCTTGTGTGGGTGATATGGTGATGGCCACTGTCAAAAAGGGAAAGCCCGATCTCAGGA
AGAAGGTCCTTCCTGCTGTCATTGTTAGGCAGCGCAAGCCATGGCGGCGAAAGGATGGGGTTTTTATGTACTTCGAAGATAATGCAGGAGTGATTGTGAACCCTAAAGGT
GAAATGAAGGTTTGTTTGTTGGTAACATTACAGGTTCCGCAATTACTGGTCCTATTGGGAAGGAGTGTGCAGATTTGTGGCCTAGGATTGCCAGTGCAGCCAATGCTATT
GCTTAGTGTTACCCTAGAGTTTAAATCTTCTCCTTTCTGTGGTTACAGCAGCTCTTATCATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAGCGAGGGCGCGGAGGATCTGCTGGTAACAAGTTCAGGATGTCACTGGGTCTACCGGTGGCAGCGACCGTCAATTGTGCCGACAACACGGGAGCCAAGAACTT
GTACATCATCTCAGTTAAGGGTATCAAGGGGCGTCTGAACAGATTGCCATCGGCTTGTGTGGGTGATATGGTGATGGCCACTGTCAAAAAGGGAAAGCCCGATCTCAGGA
AGAAGGTCCTTCCTGCTGTCATTGTTAGGCAGCGCAAGCCATGGCGGCGAAAGGATGGGGTTTTTATGTACTTCGAAGATAATGCAGGAGTGATTGTGAACCCTAAAGGT
GAAATGAAGGTTTGTTTGTTGGTAACATTACAGGTTCCGCAATTACTGGTCCTATTGGGAAGGAGTGTGCAGATTTGTGGCCTAGGATTGCCAGTGCAGCCAATGCTATT
GCTTAGTGTTACCCTAGAGTTTAAATCTTCTCCTTTCTGTGGTTACAGCAGCTCTTATCATTTTTGA
Protein sequenceShow/hide protein sequence
MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKG
EMKVCLLVTLQVPQLLVLLGRSVQICGLGLPVQPMLLLSVTLEFKSSPFCGYSSSYHF