; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G3851 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G3851
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationctg105:3516684..3521560
RNA-Seq ExpressionCucsat.G3851
SyntenyCucsat.G3851
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605088.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.37e-13778.47Show/hide
Query:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL
        MVVAS FTASL FSV+S+NRASS+ QLS RNS RSIVSA PRPYGDSSTIGLSSKT GAPLNLD+ DFL TSTSY PI+A++ NPP+MPAVMTPGGPL+L
Subjt:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPINS VAQRVISQLVTLATIDE++DIL                      IKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        MIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQ +E +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

XP_004148854.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucumis sativus]1.58e-16491.97Show/hide
Query:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL
        MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL
Subjt:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL                      IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
Subjt:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

XP_008457934.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Cucumis melo]3.65e-14782.85Show/hide
Query:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL
        MVVASPFTASL+FSVAS NR SSI QLSRR SHRSIVSA PRPYGDSSTIGLSSKTNGAPLNLDDKDFL TSTSY PI AR+ NPP+MPAVMTPGGPLDL
Subjt:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NSTVAQRVISQLVTLATIDEDADIL                      IKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        MIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQSIE +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

XP_022948075.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita moschata]1.68e-13878.83Show/hide
Query:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL
        MVVAS FTASL FSV+S+NRASS+ QLSRRNS RSIVSA PRPYGDSSTIGLSSKT GAPLNLD+ DFL TSTSY PI+A++ NPP+MPAVMTPGGPL+L
Subjt:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPINS VAQRVISQLVTLATIDE++DIL                      IKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        MIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQ +E +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

XP_038902836.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Benincasa hispida]2.01e-14481.39Show/hide
Query:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL
        M VAS FTASLSFSV+S+NR SSISQLSRRNSHRSIVSA PRPYGDSSTIGLSSKT G PL++DDKDFL TSTSY PI AR+ NPP+MPAVMTPGGPLDL
Subjt:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDEDADIL                      IKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        MIHQPQSGCGG VEDVRRQVNEAVQSR+KI+KMYAAFTGQ IE +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

TrEMBL top hitse value%identityAlignment
A0A0A0LLX4 ATP-dependent Clp protease proteolytic subunit7.66e-16591.97Show/hide
Query:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL
        MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL
Subjt:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL                      IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
Subjt:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

A0A1S3C7Y1 ATP-dependent Clp protease proteolytic subunit1.77e-14782.85Show/hide
Query:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL
        MVVASPFTASL+FSVAS NR SSI QLSRR SHRSIVSA PRPYGDSSTIGLSSKTNGAPLNLDDKDFL TSTSY PI AR+ NPP+MPAVMTPGGPLDL
Subjt:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NSTVAQRVISQLVTLATIDEDADIL                      IKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        MIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQSIE +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

A0A6J1D5M0 ATP-dependent Clp protease proteolytic subunit5.44e-13776.92Show/hide
Query:  VVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLS
        + AS FTASL+FSV+SNNR SSI  LSRRNS RS+VS  PRPYGDSSTIGLSSK+  APL+LDDKDFL  STSY PI A++ NPP+MPAVMTPGGPLDLS
Subjt:  VVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDEDADIL                      IKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        IHQPQSGCGG VEDVRRQVNEAVQSR+K++KM++AFTGQ +E +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  IHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

A0A6J1G8P9 ATP-dependent Clp protease proteolytic subunit8.12e-13978.83Show/hide
Query:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL
        MVVAS FTASL FSV+S+NRASS+ QLSRRNS RSIVSA PRPYGDSSTIGLSSKT GAPLNLD+ DFL TSTSY PI+A++ NPP+MPAVMTPGGPL+L
Subjt:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPINS VAQRVISQLVTLATIDE++DIL                      IKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        MIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQ +E +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

A0A6J1KXP8 ATP-dependent Clp protease proteolytic subunit1.34e-13778.1Show/hide
Query:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL
        M VAS FTASL FSV+S+NRASS+ QLSRRNS RSIVSA PRPYGDSSTIGLSSKT G PLNLD+ DFL TSTSY PI+A++ NPP+MPAVMTPGGPL+L
Subjt:  MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPINS VAQRVISQLVTLATIDE++DIL                      IKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        MIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQ +E +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  MIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

SwissProt top hitse value%identityAlignment
A7Z939 ATP-dependent Clp protease proteolytic subunit1.6e-2941.86Show/hide
Query:  DLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADI----------------------LIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNS
        D+ S L ++RII +G  I+  VA  ++SQL+ L   D + DI                       IKPKV T+C G+ AS GA LLA GEKG RYA+PNS
Subjt:  DLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADI----------------------LIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVL
         +MIHQP  G  G   ++       +  R+K+ K+ A  TGQ +E I++  DRD F S  EAL++GLID VL
Subjt:  RIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVL

P80244 ATP-dependent Clp protease proteolytic subunit1.6e-2941.28Show/hide
Query:  DLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADI----------------------LIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNS
        D+ S L ++RII +G  I+  VA  ++SQL+ LA  D + +I                       IKPKV T+C G+ AS GA LLA GEKG RYA+PNS
Subjt:  DLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADI----------------------LIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVL
         +MIHQP  G  G   ++       +  R+K+ K+ A  TGQ +E I++  DRD F S  EAL++GLID +L
Subjt:  RIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVL

Q5HQW0 ATP-dependent Clp protease proteolytic subunit2.1e-2940Show/hide
Query:  DLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNS
        D+ S L ++RII +G  I+  VA  ++SQL+ L   D + DI                       IKP V T+C G+ AS G+ LLA G KG R+A+PN+
Subjt:  DLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETE
         +MIHQP  G  G   ++    N  +++R K+ ++ +  TGQSIE IQQ  DRD FL+ +EA ++GLID V+E E
Subjt:  RIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETE

Q8CTE0 ATP-dependent Clp protease proteolytic subunit2.1e-2940Show/hide
Query:  DLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNS
        D+ S L ++RII +G  I+  VA  ++SQL+ L   D + DI                       IKP V T+C G+ AS G+ LLA G KG R+A+PN+
Subjt:  DLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETE
         +MIHQP  G  G   ++    N  +++R K+ ++ +  TGQSIE IQQ  DRD FL+ +EA ++GLID V+E E
Subjt:  RIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETE

Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic3.9e-8463.4Show/hide
Query:  LSFSVASNN-RASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRI
        LSFS  + N + +S    ++RN  R IVSA   PYGDS   GLSS  +G+P+ +D+K     +  +  I A++ NPPVMP+VMTPGGPLDLSSVLFRNRI
Subjt:  LSFSVASNN-RASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRI

Query:  IFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC
        IFIGQPIN+ VAQRVISQLVTLA+ID+ +DIL                      IKPKVGTV FG+ ASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GC
Subjt:  IFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC

Query:  GGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        GG VEDVRRQVNEA+++R KI++MYAAFTGQ +E +QQY +RDRFLS SEAL+FGLIDG+LETEY
Subjt:  GGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 51.1e-2838.19Show/hide
Query:  STSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTV
        S+ Y P  A+   PP M           + S LF+ RII  G  ++  +A  +++QL+ L  +D   DI+                      I+P V TV
Subjt:  STSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTV

Query:  CFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVL
        C G+ AS GA LL+ G KG RY++PNSRIMIHQP  G  G   D+  Q NE +  +  +    A  TGQS+E I Q  DRD F+S  EA ++GLIDGV+
Subjt:  CFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVL

AT1G11750.1 CLP protease proteolytic subunit 62.8e-8563.4Show/hide
Query:  LSFSVASNN-RASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRI
        LSFS  + N + +S    ++RN  R IVSA   PYGDS   GLSS  +G+P+ +D+K     +  +  I A++ NPPVMP+VMTPGGPLDLSSVLFRNRI
Subjt:  LSFSVASNN-RASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRI

Query:  IFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC
        IFIGQPIN+ VAQRVISQLVTLA+ID+ +DIL                      IKPKVGTV FG+ ASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GC
Subjt:  IFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC

Query:  GGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        GG VEDVRRQVNEA+++R KI++MYAAFTGQ +E +QQY +RDRFLS SEAL+FGLIDG+LETEY
Subjt:  GGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

AT1G11750.2 CLP protease proteolytic subunit 62.1e-8561.87Show/hide
Query:  LSFSVASNN-RASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDK----------DFLRTSTSY---EPIVARRDNPPVMPAVMTPGG
        LSFS  + N + +S    ++RN  R IVSA   PYGDS   GLSS  +G+P+ +D+K          + L++ST Y     I A++ NPPVMP+VMTPGG
Subjt:  LSFSVASNN-RASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDK----------DFLRTSTSY---EPIVARRDNPPVMPAVMTPGG

Query:  PLDLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMP
        PLDLSSVLFRNRIIFIGQPIN+ VAQRVISQLVTLA+ID+ +DIL                      IKPKVGTV FG+ ASQGALLLAGGEKGMRYAMP
Subjt:  PLDLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADIL----------------------IKPKVGTVCFGIVASQGALLLAGGEKGMRYAMP

Query:  NSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
        N+R+MIHQPQ+GCGG VEDVRRQVNEA+++R KI++MYAAFTGQ +E +QQY +RDRFLS SEAL+FGLIDG+LETEY
Subjt:  NSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY

AT1G66670.1 CLP protease proteolytic subunit 32.0e-2737.36Show/hide
Query:  LDLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADILI----------------------KPKVGTVCFGIVASQGALLLAGGEKGMRYAMPN
        LD +++L R RI+F+G  ++   A  VISQL+ L   D + DI +                      K  V TVC G+ AS GA LLA G KG RY MPN
Subjt:  LDLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADILI----------------------KPKVGTVCFGIVASQGALLLAGGEKGMRYAMPN

Query:  SRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLE
        S++MIHQP    GG   ++  ++ E +  + K+ K+++  TG+    I+   DRD FL+  EA ++GLID V++
Subjt:  SRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLE

AT5G45390.1 CLP protease P42.0e-2732.18Show/hide
Query:  SFSVASNNRASSISQLSRRNSHRSI-VSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRII
        + S++S+ + S +S  SR NS  S   S+FP+P   ++     +K    PL       LR + +   +   +++          G   D+  +L R RI+
Subjt:  SFSVASNNRASSISQLSRRNSHRSI-VSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRII

Query:  FIGQPINSTVAQRVISQLVTLATIDEDADI----------------------LIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCG
        F+G  I+  VA  ++SQL+ L   D   DI                      L++  V T+  GI AS  +++L  G KG R+AMPN+RIMIHQP  G  
Subjt:  FIGQPINSTVAQRVISQLVTLATIDEDADI----------------------LIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCG

Query:  GDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLE
        G   DV  Q  E + ++N +  + A  T +S E + + IDRDR++S  EA+++GLIDGV++
Subjt:  GDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTCTTTCTTTGGTTTCATATTGGAGCTCTAAGAACTCAGCGCCATTCTCACAAGCTTCGCTCAAAATGGTAGTAGCTTCACCTTTTACTGCATCTCTCAGTTTCTCTGT
CGCTTCGAACAATCGAGCCTCATCCATTTCTCAACTTTCTCGAAGAAATTCACACAGGTCCATAGTCTCTGCTTTCCCGAGGCCTTATGGCGACTCCTCCACAATTGGAT
TATCGAGTAAAACAAATGGGGCACCTTTAAATCTTGACGATAAAGACTTTCTTCGCACCAGTACAAGTTATGAACCTATAGTGGCTAGGAGAGATAATCCACCCGTTATG
CCTGCTGTGATGACACCAGGAGGGCCATTGGATCTCTCTTCTGTGTTATTTAGGAACCGTATTATATTTATTGGTCAACCTATCAACTCAACCGTGGCACAACGAGTTAT
ATCACAGCTTGTGACTCTAGCAACAATTGATGAGGATGCAGATATTCTGATAAAGCCTAAGGTTGGTACAGTGTGCTTCGGAATTGTTGCAAGTCAAGGGGCTCTTCTTC
TTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCAAATTCTCGAATTATGATTCATCAGCCACAAAGTGGATGTGGGGGTGATGTGGAGGATGTTAGACGTCAAGTC
AATGAAGCAGTTCAATCACGCAATAAAATTGAAAAGATGTATGCTGCATTTACTGGCCAATCTATAGAGACAATACAACAATACATTGATAGGGATCGATTTTTGTCAGT
TTCCGAGGCTTTAGATTTTGGGCTTATTGACGGTGTGCTGGAAACAGAATACTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTTTCTTTGGTTTCATATTGGAGCTCTAAGAACTCAGCGCCATTCTCACAAGCTTCGCTCAAAATGGTAGTAGCTTCACCTTTTACTGCATCTCTCAGTTTCTCTGT
CGCTTCGAACAATCGAGCCTCATCCATTTCTCAACTTTCTCGAAGAAATTCACACAGGTCCATAGTCTCTGCTTTCCCGAGGCCTTATGGCGACTCCTCCACAATTGGAT
TATCGAGTAAAACAAATGGGGCACCTTTAAATCTTGACGATAAAGACTTTCTTCGCACCAGTACAAGTTATGAACCTATAGTGGCTAGGAGAGATAATCCACCCGTTATG
CCTGCTGTGATGACACCAGGAGGGCCATTGGATCTCTCTTCTGTGTTATTTAGGAACCGTATTATATTTATTGGTCAACCTATCAACTCAACCGTGGCACAACGAGTTAT
ATCACAGCTTGTGACTCTAGCAACAATTGATGAGGATGCAGATATTCTGATAAAGCCTAAGGTTGGTACAGTGTGCTTCGGAATTGTTGCAAGTCAAGGGGCTCTTCTTC
TTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCAAATTCTCGAATTATGATTCATCAGCCACAAAGTGGATGTGGGGGTGATGTGGAGGATGTTAGACGTCAAGTC
AATGAAGCAGTTCAATCACGCAATAAAATTGAAAAGATGTATGCTGCATTTACTGGCCAATCTATAGAGACAATACAACAATACATTGATAGGGATCGATTTTTGTCAGT
TTCCGAGGCTTTAGATTTTGGGCTTATTGACGGTGTGCTGGAAACAGAATACTGA
Protein sequenceShow/hide protein sequence
SLSLVSYWSSKNSAPFSQASLKMVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTSTSYEPIVARRDNPPVM
PAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADILIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQV
NEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY