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Cucsat.G3857 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G3857
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationctg105:3636713..3638539
RNA-Seq ExpressionCucsat.G3857
SyntenyCucsat.G3857
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031744754.1 uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]1.35e-2081.48Show/hide
Query:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK
        NAM +EMT LDDNGTWDLV RP GKKA+GCKWV A+K+NPDGT+ARLKARLVAK
Subjt:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK

XP_031744755.1 uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus]1.35e-2081.48Show/hide
Query:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK
        NAM +EMT LDDNGTWDLV RP GKKA+GCKWV A+K+NPDGT+ARLKARLVAK
Subjt:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK

XP_031744756.1 uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus]1.34e-2081.48Show/hide
Query:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK
        NAM +EMT LDDNGTWDLV RP GKKA+GCKWV A+K+NPDGT+ARLKARLVAK
Subjt:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK

XP_031744758.1 uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus]1.32e-2081.48Show/hide
Query:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK
        NAM +EMT LDDNGTWDLV RP GKKA+GCKWV A+K+NPDGT+ARLKARLVAK
Subjt:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK

XP_038885794.1 uncharacterized mitochondrial protein AtMg00820-like [Benincasa hispida]3.72e-2350Show/hide
Query:  MNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK--VGPYNNS-----------------TIKMFFFMVTFKRKFIWSNYLG
        M +E+T LDDN TWDLV  P+GKKA+ CKWV+A+KVNPDG++ RLKARLVAK  V  Y                     +KM FFMV FK++ IW N+ G
Subjt:  MNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK--VGPYNNS-----------------TIKMFFFMVTFKRKFIWSNYLG

Query:  CCSRGE
           RG 
Subjt:  CCSRGE

TrEMBL top hitse value%identityAlignment
A0A5A7UAV0 Putative Polyprotein8.95e-1976.36Show/hide
Query:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAKV
        NAM +EMT LDDNGTWDLV R  GKKA+GCKWV ++KVNPDG +ARL ARLVAKV
Subjt:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAKV

A0A5A7UMJ8 Putative helicase chr101.54e-1875.47Show/hide
Query:  MNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAKV
        M +EMTTLD NGTWDLV  P  KKA+ CKWV AIKVNPDGT+A+LKA LVAKV
Subjt:  MNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAKV

A0A5D3BUA0 Cysteine-rich RLK (RECEPTOR-like protein kinase) 82.63e-1972.22Show/hide
Query:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK
        NAM ++MTT DDNGTWDLV RP GKK +GCKW+ ++KVN D TMARLKARL+AK
Subjt:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK

A0A5D3C8E2 Putative Polyprotein8.95e-1976.36Show/hide
Query:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAKV
        NAM +EMT LDDNGTWDLV R  GKKA+GCKWV ++KVNPDG +ARL ARLVAKV
Subjt:  NAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAKV

Q7Y165 Putative retrotransposon protein1.72e-1850.6Show/hide
Query:  HNAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAKVGPYNNSTIKMFFFMVTFKRKFIWSNYL
        H AM  E+  L+ N TWDLV  P GKK + CKWV A+K NPDG + R KARL+  +G Y N   +M F+M  FKR++IW  +L
Subjt:  HNAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAKVGPYNNSTIKMFFFMVTFKRKFIWSNYL

SwissProt top hitse value%identityAlignment
P04146 Copia protein4.6e-0439.62Show/hide
Query:  AMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK
        A+N E+     N TW +  RP  K  +  +WV ++K N  G   R KARLVA+
Subjt:  AMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-949.9e-0749.06Show/hide
Query:  AMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK
        AM +EM +L  NGT+ LV  P GK+ + CKWV  +K + D  + R KARLV K
Subjt:  AMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK

P92520 Uncharacterized mitochondrial protein AtMg008209.6e-1037.39Show/hide
Query:  AMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK----------------------------------VGPYNNSTIKMFF
        AM +E+  L  N TW LV  PV +  +GCKWV   K++ DGT+ RLKARLVAK                                  VG   N   KM F
Subjt:  AMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK----------------------------------VGPYNNSTIKMFF

Query:  FMVTFKRKFIWSNYL
         M  FK+KFI  N L
Subjt:  FMVTFKRKFIWSNYL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.4e-0647.27Show/hide
Query:  NAMNKEMTTLDDNGTWDLVLRPVGK-KAMGCKWVLAIKVNPDGTMARLKARLVAK
        NAM  E+     N TWDLV  P      +GC+W+   K N DG++ R KARLVAK
Subjt:  NAMNKEMTTLDDNGTWDLVLRPVGK-KAMGCKWVLAIKVNPDGTMARLKARLVAK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.4e-0546.3Show/hide
Query:  AMNKEMTTLDDNGTWDLV-LRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK
        AM  E+     N TWDLV   P     +GC+W+   K N DG++ R KARLVAK
Subjt:  AMNKEMTTLDDNGTWDLV-LRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.3e-0950.94Show/hide
Query:  AMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK
        AM+ E+  ++   TW++   P  KK +GCKWV  IK N DGT+ R KARLVAK
Subjt:  AMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)6.8e-1137.39Show/hide
Query:  AMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK----------------------------------VGPYNNSTIKMFF
        AM +E+  L  N TW LV  PV +  +GCKWV   K++ DGT+ RLKARLVAK                                  VG   N   KM F
Subjt:  AMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAK----------------------------------VGPYNNSTIKMFF

Query:  FMVTFKRKFIWSNYL
         M  FK+KFI  N L
Subjt:  FMVTFKRKFIWSNYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTCCCATTGCCCTTCGCAAAGGTAAACGCATGTGTACTTATCCTATTTCTTTGTTTGTTTCATATACCCAGTTGTCCTCTCCCACATATTCATTTATTACATCT
CTTGACTCCACCTCTATCCCTAACTTTGTTCATGAAGGTTAGGCATAATGCAATGAATAAGGAGATGACTACTCTTGATGATAATGGTACTTGGGATCTGGTTTTGCGTC
CGGTTGGAAAGAAGGCGATGGGGTGTAAATGGGTATTAGCTATAAAGGTCAATCCCGATGGAACAATGGCTCGGTTGAAAGCTCGTCTTGTTGCCAAAGTTGGCCCTTAC
AACAACTCAACAATAAAAATGTTTTTCTTCATGGTGACCTTCAAGAGAAAGTTCATATGGAGCAACTACCTGGGCTGTTGCTCAAGAGGAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCTTCCCATTGCCCTTCGCAAAGGTAAACGCATGTGTACTTATCCTATTTCTTTGTTTGTTTCATATACCCAGTTGTCCTCTCCCACATATTCATTTATTACATCT
CTTGACTCCACCTCTATCCCTAACTTTGTTCATGAAGGTTAGGCATAATGCAATGAATAAGGAGATGACTACTCTTGATGATAATGGTACTTGGGATCTGGTTTTGCGTC
CGGTTGGAAAGAAGGCGATGGGGTGTAAATGGGTATTAGCTATAAAGGTCAATCCCGATGGAACAATGGCTCGGTTGAAAGCTCGTCTTGTTGCCAAAGTTGGCCCTTAC
AACAACTCAACAATAAAAATGTTTTTCTTCATGGTGACCTTCAAGAGAAAGTTCATATGGAGCAACTACCTGGGCTGTTGCTCAAGAGGAGAGTGA
Protein sequenceShow/hide protein sequence
MIFPLPFAKVNACVLILFLCLFHIPSCPLPHIHLLHLLTPPLSLTLFMKVRHNAMNKEMTTLDDNGTWDLVLRPVGKKAMGCKWVLAIKVNPDGTMARLKARLVAKVGPY
NNSTIKMFFFMVTFKRKFIWSNYLGCCSRGE