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Cucsat.G3948 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G3948
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionnuclear pore complex protein NUP160
Genome locationctg105:532861..535528
RNA-Seq ExpressionCucsat.G3948
SyntenyCucsat.G3948
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0033036 - macromolecule localization (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0071702 - organic substance transport (biological process)
GO:0071705 - nitrogen compound transport (biological process)
GO:0005643 - nuclear pore (cellular component)
InterPro domainsIPR021717 - Nucleoporin Nup120/160


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ95576.1 nuclear pore complex protein NUP160 isoform X4 [Cucumis melo var. makuwa]5.21e-8795.38Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPA LFRLYVEYGRYTEATHLLLE MESFASM PAD+INRKRPFS+CFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
        EKLRNLLHGALLNH+KLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
XP_008457197.1 PREDICTED: nuclear pore complex protein NUP160 isoform X5 [Cucumis melo]6.75e-7895.38Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPA LFRLYVEYGRYTEATHLLLE MESFASM PAD+INRKRPFS+CFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
        EKLRNLLHGALLNH+KLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
XP_011649106.1 nuclear pore complex protein NUP160 isoform X1 [Cucumis sativus]3.87e-81100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
        EKLRNLLHGALLNHLKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
XP_011649107.1 nuclear pore complex protein NUP160 isoform X2 [Cucumis sativus]3.86e-81100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
        EKLRNLLHGALLNHLKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
XP_011649109.1 nuclear pore complex protein NUP160 isoform X3 [Cucumis sativus]3.81e-81100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
        EKLRNLLHGALLNHLKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
TrEMBL top hitse value%identityAlignment
A0A0A0LKG2 Uncharacterized protein7.72e-92100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
        EKLRNLLHGALLNHLKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
A0A1S3C516 nuclear pore complex protein NUP160 isoform X53.27e-7895.38Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPA LFRLYVEYGRYTEATHLLLE MESFASM PAD+INRKRPFS+CFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
        EKLRNLLHGALLNH+KLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
A0A1S3C5M5 nuclear pore complex protein NUP160 isoform X33.30e-7895.38Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPA LFRLYVEYGRYTEATHLLLE MESFASM PAD+INRKRPFS+CFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
        EKLRNLLHGALLNH+KLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
A0A1S3C685 nuclear pore complex protein NUP160 isoform X43.28e-7895.38Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPA LFRLYVEYGRYTEATHLLLE MESFASM PAD+INRKRPFS+CFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
        EKLRNLLHGALLNH+KLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
A0A5D3B9M7 Nuclear pore complex protein NUP160 isoform X42.52e-8795.38Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPA LFRLYVEYGRYTEATHLLLE MESFASM PAD+INRKRPFS+CFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
        EKLRNLLHGALLNH+KLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHLKLLKVEGDDILSAVA
SwissProt top hitse value%identityAlignment
Q9C811 Nuclear pore complex protein NUP1602.4e-3957.03Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
        +ELPLWL+ MFKDG++ K  GM G+E++PA LF+LYV+YGR TEAT+LLLEYMESFAS  PA+++ RK+   + FPY  V+ LW ++++ + SG MV+ C
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHLKLLKVEGDDILSA
         KL+  LH ALLNHLKLLKV+ +D +S+
Subjt:  EKLRNLLHGALLNHLKLLKVEGDDILSA
Arabidopsis top hitse value%identityAlignment
AT1G33410.1 SUPPRESSOR OF AUXIN RESISTANCE12.7e-3853.28Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMA---------PADLINRKRPFSICFPYNAVQYLWCKIDELI
        +ELPLWL+ MFKDG++ K  GM G+E++PA LF+LYV+YGR TEAT+LLLEYMESFAS           PA+++ RK+   + FPY  V+ LW ++++ +
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMA---------PADLINRKRPFSICFPYNAVQYLWCKIDELI

Query:  RSGHMVDACEKLRNLLHGALLNHLKLLKVEGDDILSA
         SG MV+ C KL+  LH ALLNHLKLLKV+ +D +S+
Subjt:  RSGHMVDACEKLRNLLHGALLNHLKLLKVEGDDILSA
AT1G33410.2 SUPPRESSOR OF AUXIN RESISTANCE11.7e-4057.03Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC
        +ELPLWL+ MFKDG++ K  GM G+E++PA LF+LYV+YGR TEAT+LLLEYMESFAS  PA+++ RK+   + FPY  V+ LW ++++ + SG MV+ C
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHLKLLKVEGDDILSA
         KL+  LH ALLNHLKLLKV+ +D +S+
Subjt:  EKLRNLLHGALLNHLKLLKVEGDDILSA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGCCTCTTTGGCTGGTTCTTATGTTTAAGGATGGTAGAAGGCCAAAGACATGGGGGATGACTGGTGAAGAATCAAATCCAGCATTGTTGTTTCGATTATATGT
TGAATATGGTCGATATACAGAGGCTACCCATCTGTTGCTCGAATACATGGAATCCTTTGCATCAATGGCACCAGCAGACTTAATTAACCGAAAAAGACCATTCTCTATTT
GCTTCCCCTACAACGCCGTTCAGTACTTATGGTGCAAAATAGATGAATTGATCCGCTCAGGTCACATGGTAGATGCTTGTGAGAAGCTGAGAAACCTATTGCATGGTGCT
TTGTTGAATCATCTGAAGCTGCTTAAAGTCGAGGGAGATGATATCCTATCTGCCGTCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGCCTCTTTGGCTGGTTCTTATGTTTAAGGATGGTAGAAGGCCAAAGACATGGGGGATGACTGGTGAAGAATCAAATCCAGCATTGTTGTTTCGATTATATGT
TGAATATGGTCGATATACAGAGGCTACCCATCTGTTGCTCGAATACATGGAATCCTTTGCATCAATGGCACCAGCAGACTTAATTAACCGAAAAAGACCATTCTCTATTT
GCTTCCCCTACAACGCCGTTCAGTACTTATGGTGCAAAATAGATGAATTGATCCGCTCAGGTCACATGGTAGATGCTTGTGAGAAGCTGAGAAACCTATTGCATGGTGCT
TTGTTGAATCATCTGAAGCTGCTTAAAGTCGAGGGAGATGATATCCTATCTGCCGTCGCTTAA
Protein sequenceShow/hide protein sequence
MELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFASMAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDACEKLRNLLHGA
LLNHLKLLKVEGDDILSAVA