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Cucsat.G3960 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G3960
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationctg105:884911..886093
RNA-Seq ExpressionCucsat.G3960
SyntenyCucsat.G3960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651790.1 hypothetical protein Csa_006305 [Cucumis sativus]5.12e-58100Show/hide
Query:  MNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGHGGFGGGVGGVGGIG
        MNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGHGGFGGGVGGVGGIG
Subjt:  MNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGHGGFGGGVGGVGGIG

XP_008460740.1 PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo]1.41e-5680.99Show/hide
Query:  MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH
        MAK  V+L+ FVF IMNVDGR VP  G  RQ +Y+TLERAA+PVAEPP RGGVDDQKNIFGGVG F GMGGYIGGLFPHLGGVG IGKYGGIGGGFG GH
Subjt:  MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH

Query:  GGFGGGVGGVGGIGGGLVPFP
        GGFG GVGGVGG+GGG+VPFP
Subjt:  GGFGGGVGGVGGIGGGLVPFP

XP_031736585.1 elastin-like isoform X1 [Cucumis sativus]9.00e-69100Show/hide
Query:  MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH
        MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH
Subjt:  MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH

Query:  GGFGGGVGGVGGIG
        GGFGGGVGGVGGIG
Subjt:  GGFGGGVGGVGGIG

XP_031736586.1 ctenidin-3-like isoform X2 [Cucumis sativus]4.81e-6699.12Show/hide
Query:  MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH
        MAKYFVILITFVFLIMNVDGRNVP AGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH
Subjt:  MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH

Query:  GGFGGGVGGVGGIG
        GGFGGGVGGVGGIG
Subjt:  GGFGGGVGGVGGIG

XP_031736587.1 glycine-rich protein 5-like isoform X3 [Cucumis sativus]2.19e-74100Show/hide
Query:  MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH
        MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH
Subjt:  MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH

Query:  GGFGGGVGGVGGIGGGLVPFP
        GGFGGGVGGVGGIGGGLVPFP
Subjt:  GGFGGGVGGVGGIGGGLVPFP

TrEMBL top hitse value%identityAlignment
A0A1S3CEA9 glycine-rich cell wall structural protein 1-like6.82e-5780.99Show/hide
Query:  MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH
        MAK  V+L+ FVF IMNVDGR VP  G  RQ +Y+TLERAA+PVAEPP RGGVDDQKNIFGGVG F GMGGYIGGLFPHLGGVG IGKYGGIGGGFG GH
Subjt:  MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH

Query:  GGFGGGVGGVGGIGGGLVPFP
        GGFG GVGGVGG+GGG+VPFP
Subjt:  GGFGGGVGGVGGIGGGLVPFP

A0A5D3D259 Glycine-rich cell wall structural protein 1-like6.82e-5780.99Show/hide
Query:  MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH
        MAK  V+L+ FVF IMNVDGR VP  G  RQ +Y+TLERAA+PVAEPP RGGVDDQKNIFGGVG F GMGGYIGGLFPHLGGVG IGKYGGIGGGFG GH
Subjt:  MAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGH

Query:  GGFGGGVGGVGGIGGGLVPFP
        GGFG GVGGVGG+GGG+VPFP
Subjt:  GGFGGGVGGVGGIGGGLVPFP

A0A6J1CDU6 WW domain-containing protein C660.062.75e-3060.77Show/hide
Query:  FVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNI-FGGVGAFAGMGGYIGGLFPHLG--GVGVIGKYGGIGGGFGV---
        FV+L  FV L+++  GR+VPG   R  +K +TLE A  PVA+PPS GGV +QK I FGGVG FAGMGG++GGLFPHLG  GVG IGK+GGIGGG G+   
Subjt:  FVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNI-FGGVGAFAGMGGYIGGLFPHLG--GVGVIGKYGGIGGGFGV---

Query:  ---GHGGFGGGVGGVGG----IGGGLVPFP
           G GG GGG GGVGG    +GGGL PFP
Subjt:  ---GHGGFGGGVGGVGG----IGGGLVPFP

A0A6J1HL05 glycine-rich protein 5-like6.31e-4169.83Show/hide
Query:  VILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGHGGFGG
        V+++ FV L+++ +GRNVPG G    +    L+ A APVA  PS   VD QKNI+GGVG FAGMGGYIGGLFPHLGGVGVIGKYGGIGGG G GHGGFGG
Subjt:  VILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGHGGFGG

Query:  GVGGVGGIGGGLVPFP
        GVGGVGG+GGG+VPFP
Subjt:  GVGGVGGIGGGLVPFP

A0A6J1KIQ3 glycine-rich protein 5-like6.31e-4169.83Show/hide
Query:  VILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGHGGFGG
        V+++ FV L+++ +GRNVPG G    +    L+ A APVA  PS   VD QKNI+GGVG FAGMGGYIGGLFPHLGGVGVIGKYGGIGGG G GHGGFGG
Subjt:  VILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGFGVGHGGFGG

Query:  GVGGVGGIGGGLVPFP
        GVGGVGG+GGG+VPFP
Subjt:  GVGGVGGIGGGLVPFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTACGCTCAACTGTCTCCTCCCTCTCAACTTGCTCTCTATAAAGCCCCCATCCTCATGCATCCAAACTTCAGGTGACTTCAATAAATCTAGAGAGTTGAAAGAGACGAA
AATGGCAAAATATTTTGTCATTCTGATTACATTTGTTTTCTTAATCATGAATGTGGATGGCCGCAACGTTCCGGGAGCTGGTGGTCGTCGGCAGGAGAAGTACCGAACCC
TAGAACGGGCAGCAGCACCCGTGGCGGAACCACCATCCAGAGGCGGCGTTGACGACCAAAAGAACATATTTGGTGGAGTTGGGGCTTTTGCAGGAATGGGTGGCTACATT
GGAGGGTTGTTTCCACATCTTGGTGGGGTTGGGGTAATCGGCAAGTACGGTGGAATTGGTGGTGGCTTTGGAGTTGGTCACGGTGGCTTCGGAGGCGGAGTTGGAGGTGT
TGGTGGCATAGGTGGTGGCCTTGTGCCATTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATTACGCTCAACTGTCTCCTCCCTCTCAACTTGCTCTCTATAAAGCCCCCATCCTCATGCATCCAAACTTCAGGTGACTTCAATAAATCTAGAGAGTTGAAAGAGACGAA
AATGGCAAAATATTTTGTCATTCTGATTACATTTGTTTTCTTAATCATGAATGTGGATGGCCGCAACGTTCCGGGAGCTGGTGGTCGTCGGCAGGAGAAGTACCGAACCC
TAGAACGGGCAGCAGCACCCGTGGCGGAACCACCATCCAGAGGCGGCGTTGACGACCAAAAGAACATATTTGGTGGAGTTGGGGCTTTTGCAGGAATGGGTGGCTACATT
GGAGGGTTGTTTCCACATCTTGGTGGGGTTGGGGTAATCGGCAAGTACGGTGGAATTGGTGGTGGCTTTGGAGTTGGTCACGGTGGCTTCGGAGGCGGAGTTGGAGGTGT
TGGTGGCATAGGTGGTGGCCTTGTGCCATTTCCTTGA
Protein sequenceShow/hide protein sequence
ITLNCLLPLNLLSIKPPSSCIQTSGDFNKSRELKETKMAKYFVILITFVFLIMNVDGRNVPGAGGRRQEKYRTLERAAAPVAEPPSRGGVDDQKNIFGGVGAFAGMGGYI
GGLFPHLGGVGVIGKYGGIGGGFGVGHGGFGGGVGGVGGIGGGLVPFP