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Cucsat.G3985 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G3985
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionglycine-rich cell wall structural protein-like isoform X8
Genome locationctg105:1479035..1479874
RNA-Seq ExpressionCucsat.G3985
SyntenyCucsat.G3985
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050716.1 hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa]1.30e-5082.98Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGGVG----------------------FGGGHGIGGGFGKGGGVGGG
        MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGGG G                      +GGGHGIGGGFGKGGGVGGG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGGVG----------------------FGGGHGIGGGFGKGGGVGGG

Query:  VGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAG--GGFGKGGGLGGGIGKGGGLGGG
        +GGGAGGG GVGGGIGKGGGLGGG+GGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAG  GGFGKGGGLGGGIGKGGGLGGG
Subjt:  VGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAG--GGFGKGGGLGGGIGKGGGLGGG

KAE8651806.1 hypothetical protein Csa_006078 [Cucumis sativus]5.00e-5789.13Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG--------------------VGFGGGHGIGGGFGKGGGVGGGVG
        MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG                    VGFGGGHGIGGGFGKGGGVGGGVG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG--------------------VGFGGGHGIGGGFGKGGGVGGGVG

Query:  GGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG
        GGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG
Subjt:  GGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG

XP_016902584.1 PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo]4.60e-5180.31Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGGVG----------------------FGGGHGIGGGFGKGGGVGGG
        MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGGG G                      +GGGHGIGGGFGKGGGVGGG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGGVG----------------------FGGGHGIGGGFGKGGGVGGG

Query:  VGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK-------GGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG
        +GGGAGGG GVGGGIGKGGGLGGG+GGGFGKGGGLGGGAGGGFGKGGGLGGGIGK       GGGLGGGAGGGFGKGGGLGGGIGKGGG GGG
Subjt:  VGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK-------GGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG

XP_031737441.1 LOW QUALITY PROTEIN: glycine-rich cell wall structural protein [Cucumis sativus]1.03e-5689.13Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG--------------------VGFGGGHGIGGGFGKGGGVGGGVG
        MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG                    VGFGGGHGIGGGFGKGGGVGGGVG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG--------------------VGFGGGHGIGGGFGKGGGVGGGVG

Query:  GGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG
        GGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG
Subjt:  GGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG

XP_038906572.1 glycine-rich cell wall structural protein isoform X3 [Benincasa hispida]2.76e-3869.82Show/hide
Query:  MASGWKRVALLSLLCFQVIVY--NVVAKEDGKEEKFLFFGKSGGLGSGFGGGSG--------------------FGGGVG--FGGGHGIGGG--------
        MASG+KRVALLSLLCF VIVY  NVVAKEDGKEEKFLFFGKSGGLG GFGGG G                    FGGG G  FGGGHGIGGG        
Subjt:  MASGWKRVALLSLLCFQVIVY--NVVAKEDGKEEKFLFFGKSGGLGSGFGGGSG--------------------FGGGVG--FGGGHGIGGG--------

Query:  ------------FGKGGGVGGGVGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGG----------AGGGFGKGGGLGGGIGKGGGLGGG----AG
                    FGKGGG+GGGVGGGAGGG G+GGGIGKGGGLGGG+GGGFGKGGGLGGG          AGGGFGKGGGLGGGIGKGGGLGGG    AG
Subjt:  ------------FGKGGGVGGGVGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGG----------AGGGFGKGGGLGGGIGKGGGLGGG----AG

Query:  GGFGKGGGLGGGIGKGGGLGGG
        GGFGKGGGLGGGIGKGGGLGGG
Subjt:  GGFGKGGGLGGGIGKGGGLGGG

TrEMBL top hitse value%identityAlignment
A0A0A0LIH7 Uncharacterized protein1.75e-5283.7Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG--------------------VGFGGGHGIGGGFGKGGGVGGGVG
        MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG                    VGFGGGHGIGGGFGKGGGVGGGVG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGG--------------------VGFGGGHGIGGGFGKGGGVGGGVG

Query:  GGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG
        GGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGG          AGGGFGKGGGLGGGIGKGGGLGGG
Subjt:  GGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG

A0A1S4E2X3 glycine-rich cell wall structural protein 12.23e-5180.31Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGGVG----------------------FGGGHGIGGGFGKGGGVGGG
        MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGGG G                      +GGGHGIGGGFGKGGGVGGG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGGVG----------------------FGGGHGIGGGFGKGGGVGGG

Query:  VGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK-------GGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG
        +GGGAGGG GVGGGIGKGGGLGGG+GGGFGKGGGLGGGAGGGFGKGGGLGGGIGK       GGGLGGGAGGGFGKGGGLGGGIGKGGG GGG
Subjt:  VGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGK-------GGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG

A0A5D3BTN6 Uncharacterized protein6.29e-5182.98Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGGVG----------------------FGGGHGIGGGFGKGGGVGGG
        MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLG GFGGGSGFGGG G                      +GGGHGIGGGFGKGGGVGGG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGGVG----------------------FGGGHGIGGGFGKGGGVGGG

Query:  VGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAG--GGFGKGGGLGGGIGKGGGLGGG
        +GGGAGGG GVGGGIGKGGGLGGG+GGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAG  GGFGKGGGLGGGIGKGGGLGGG
Subjt:  VGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAG--GGFGKGGGLGGGIGKGGGLGGG

A0A6J1H3F4 glycine-rich cell wall structural protein-like isoform X82.54e-3368.78Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKE--DGKEEKFLFFGKSGGLGSGFGGGSGFGGGVG-------FGGGHGIGGG----------FGKGGGVGGGVGG
        MA+G  RVALLSL CF V+V++VVAK+  +G+EEKFLFFGKSGGLG GFGGGSGFGGG G       FGGG GIGGG          FGKGGG+GGG GG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKE--DGKEEKFLFFGKSGGLGSGFGGGSGFGGGVG-------FGGGHGIGGG----------FGKGGGVGGGVGG

Query:  GAGGGSGVGGGIGKGGGLGGGSGGGFG----------------------KGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGG
        G G G G+GGGIGKGGGLGGG+GGG G                      KGGGLGGGAGGG+GKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGG
Subjt:  GAGGGSGVGGGIGKGGGLGGGSGGGFG----------------------KGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGG

Query:  GLGGG
        GLGGG
Subjt:  GLGGG

A0A6J1H549 glycine-rich cell wall structural protein-like isoform X61.34e-3374.32Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKE--DGKEEKFLFFGKSGGLGSGFGGGSGFGGGVG-------FGGGHGIGGG----------FGKGGGVGGGVGG
        MA+G  RVALLSL CF V+V++VVAK+  +G+EEKFLFFGKSGGLG GFGGGSGFGGG G       FGGG GIGGG          FGKGGG+GGG GG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKE--DGKEEKFLFFGKSGGLGSGFGGGSGFGGGVG-------FGGGHGIGGG----------FGKGGGVGGGVGG

Query:  GAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG
        G G G G+GGGIGKGGGLGGG+GGG G G G GGG GGG+GKGGGLGGGIGKGGGLGGGAGGG+GKGGGLGGGIGKGGGLGGG
Subjt:  GAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG

SwissProt top hitse value%identityAlignment
Q9LTP5 Glycine-rich protein 54.1e-0462.91Show/hide
Query:  VYNVVAKEDGKEEKFLFFGKSGGL--GSGFGGGSGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGA
        V N   K   +++K  F    GGL  G G GGGSG GGG GFGGG G+GGG G GGG+GGG GGGAGG  G GGG G GGGLGGG G G G GGG GGG+
Subjt:  VYNVVAKEDGKEEKFLFFGKSGGL--GSGFGGGSGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGA

Query:  GGGFGKGGGLGGGIGKGGGLGG----GAGGGFGKGGGLGGGIGKGGGLGGG
        GGGFG G G GGG+G GGG GG    G GGG G GGG GGG G GGG GGG
Subjt:  GGGFGKGGGLGGGIGKGGGLGG----GAGGGFGKGGGLGGGIGKGGGLGGG

Arabidopsis top hitse value%identityAlignment
AT3G20470.1 glycine-rich protein 52.9e-0562.91Show/hide
Query:  VYNVVAKEDGKEEKFLFFGKSGGL--GSGFGGGSGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGA
        V N   K   +++K  F    GGL  G G GGGSG GGG GFGGG G+GGG G GGG+GGG GGGAGG  G GGG G GGGLGGG G G G GGG GGG+
Subjt:  VYNVVAKEDGKEEKFLFFGKSGGL--GSGFGGGSGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKGGGLGGGA

Query:  GGGFGKGGGLGGGIGKGGGLGG----GAGGGFGKGGGLGGGIGKGGGLGGG
        GGGFG G G GGG+G GGG GG    G GGG G GGG GGG G GGG GGG
Subjt:  GGGFGKGGGLGGGIGKGGGLGG----GAGGGFGKGGGLGGGIGKGGGLGGG

AT3G23450.1 unknown protein2.7e-1160.87Show/hide
Query:  LLSLLCFQVIVYNVVAKE-----DGKEEKFLFFGKSGGLGSGFGGGS--GFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGI---------
        LL+LLCF V V NVVA++     D  E+  +  GK GG G GFGGG+  G GGG G G G G GGGFG GGG GGG GGG GGG G GGG          
Subjt:  LLSLLCFQVIVYNVVAKE-----DGKEEKFLFFGKSGGLGSGFGGGS--GFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGI---------

Query:  -GKGGGLGGGSGGGFGKGGGL------GGGAGGGFGKGGGLGGGIGKGGGL------GGGAGGGFGKGGGLGGGIGKGGGLGGG
         G GGG GGG GGGFGKGGG+      GGG GGG GKGGG+GGGIGKGGG+      GGG GGG GKGGG+GGGIGKGGG+GGG
Subjt:  -GKGGGLGGGSGGGFGKGGGL------GGGAGGGFGKGGGLGGGIGKGGGL------GGGAGGGFGKGGGLGGGIGKGGGLGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCAAGTTATTGTGTACAATGTGGTTGCCAAGGAAGATGGAAAGGAAGAGAAGTTTCTATTCTT
TGGTAAGAGTGGTGGACTAGGGAGTGGATTTGGTGGTGGGAGTGGTTTTGGAGGTGGGGTAGGATTTGGAGGAGGTCACGGAATTGGTGGTGGATTTGGTAAAGGTGGTG
GCGTTGGTGGTGGAGTAGGAGGAGGCGCTGGTGGTGGCAGTGGAGTAGGAGGTGGCATTGGAAAAGGTGGAGGACTAGGTGGCGGTTCTGGAGGTGGGTTTGGAAAAGGT
GGAGGTCTAGGAGGTGGTGCTGGTGGCGGGTTTGGTAAAGGTGGTGGACTTGGTGGTGGTATTGGAAAGGGTGGAGGCTTAGGTGGTGGTGCTGGTGGAGGTTTTGGAAA
AGGTGGTGGACTCGGTGGTGGAATTGGAAAAGGTGGAGGCTTAGGTGGTGGT
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCAAGTTATTGTGTACAATGTGGTTGCCAAGGAAGATGGAAAGGAAGAGAAGTTTCTATTCTT
TGGTAAGAGTGGTGGACTAGGGAGTGGATTTGGTGGTGGGAGTGGTTTTGGAGGTGGGGTAGGATTTGGAGGAGGTCACGGAATTGGTGGTGGATTTGGTAAAGGTGGTG
GCGTTGGTGGTGGAGTAGGAGGAGGCGCTGGTGGTGGCAGTGGAGTAGGAGGTGGCATTGGAAAAGGTGGAGGACTAGGTGGCGGTTCTGGAGGTGGGTTTGGAAAAGGT
GGAGGTCTAGGAGGTGGTGCTGGTGGCGGGTTTGGTAAAGGTGGTGGACTTGGTGGTGGTATTGGAAAGGGTGGAGGCTTAGGTGGTGGTGCTGGTGGAGGTTTTGGAAA
AGGTGGTGGACTCGGTGGTGGAATTGGAAAAGGTGGAGGCTTAGGTGGTGGT
Protein sequenceShow/hide protein sequence
MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGSGFGGGSGFGGGVGFGGGHGIGGGFGKGGGVGGGVGGGAGGGSGVGGGIGKGGGLGGGSGGGFGKG
GGLGGGAGGGFGKGGGLGGGIGKGGGLGGGAGGGFGKGGGLGGGIGKGGGLGGG