CuGenDBv2

Gene ID	Cucsat.G4014
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Sterol regulatory element-binding protein cleavage-activating protein, putative
Genome location	ctg105:2284818..2287591
RNA-Seq Expression	Cucsat.G4014
Synteny	Cucsat.G4014
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021855 - PAM68-like

Homology

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GenBank top hits

e value

%identity

Alignment

TYK23016.1 putative Sterol regulatory element-binding protein cleavage-activating protein [Cucumis melo var. makuwa]

2.98e-103

87.03

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Query:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAF
        MKS  CSF QALLL  PPP NQRT+IIN STIT N +NFT T SRGQVQVNAKGFT SP TAKNRET A     QNNNEDDDDEIPEAVYSRIITRILAF
Subjt:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAF

Query:  VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
        VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEEDE  R
Subjt:  VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR

XP_004150568.1 uncharacterized protein PAM68-like [Cucumis sativus]

2.03e-125

100

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Query:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPM
        MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPM
Subjt:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPM

Query:  AFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
        AFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
Subjt:  AFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR

XP_008439311.1 PREDICTED: uncharacterized protein PAM68-like [Cucumis melo]

2.55e-104

87.57

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Query:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAF
        MKS  CSF QALLL  PPP NQRT+IIN STIT NL+NFT T SRGQVQVNAKGFT SP TAKNRET A     QNNNEDDDDEIPEAVYSRIITRILAF
Subjt:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAF

Query:  VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
        VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEEDE  R
Subjt:  VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR

XP_022140980.1 uncharacterized protein PAM68-like [Momordica charantia]

6.27e-82

70.43

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Query:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQ------NNNEDDDDEIPEAVYSRIITRILA
        MK+L CS+ QAL LS PPPW  R+ I N STIT NLTN +  ++RG V+VNAKGFT +P TAK RE  A+      N++ DDDDEI EAV +RIITRILA
Subjt:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQ------NNNEDDDDEIPEAVYSRIITRILA

Query:  FVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
        FVG+PMAFGV LLKIF+ IKEQ +WDVPIW+PF TTFLTFGAST+GIAYGTLS SLDPEK+GS+ GWEEAQKNWVEMWKEEDE  R
Subjt:  FVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR

XP_038877436.1 uncharacterized protein PAM68-like [Benincasa hispida]

3.66e-95

80.65

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Query:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQ------NNNEDDDDEIPEAVYSRIITRILA
        MK+L CSF QALLLS PPPWNQR+ I N STIT  L+NFT  +SRGQVQVNAKGF+ SP TAK+RE  A+      N  EDDDDEIPEAVYSRIITRILA
Subjt:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQ------NNNEDDDDEIPEAVYSRIITRILA

Query:  FVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
        FVG+PMAFGVTLLKIFQAIKEQN+WDVPIW+PF TTFLTFGASTMGIAYGTLSTSLDPEKKGSV GWEEAQKNWVEMWKEEDE  R
Subjt:  FVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLM4 Uncharacterized protein

9.82e-126

100

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Query:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPM
        MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPM
Subjt:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPM

Query:  AFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
        AFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
Subjt:  AFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR

A0A1S3AZ57 uncharacterized protein PAM68-like

1.24e-104

87.57

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Query:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAF
        MKS  CSF QALLL  PPP NQRT+IIN STIT NL+NFT T SRGQVQVNAKGFT SP TAKNRET A     QNNNEDDDDEIPEAVYSRIITRILAF
Subjt:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAF

Query:  VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
        VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEEDE  R
Subjt:  VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR

A0A5A7STB5 Putative Sterol regulatory element-binding protein cleavage-activating protein

1.24e-104

87.57

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Query:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAF
        MKS  CSF QALLL  PPP NQRT+IIN STIT NL+NFT T SRGQVQVNAKGFT SP TAKNRET A     QNNNEDDDDEIPEAVYSRIITRILAF
Subjt:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAF

Query:  VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
        VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEEDE  R
Subjt:  VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR

A0A5D3DHC5 Putative Sterol regulatory element-binding protein cleavage-activating protein

1.44e-103

87.03

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Query:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAF
        MKS  CSF QALLL  PPP NQRT+IIN STIT N +NFT T SRGQVQVNAKGFT SP TAKNRET A     QNNNEDDDDEIPEAVYSRIITRILAF
Subjt:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAF

Query:  VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
        VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEEDE  R
Subjt:  VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR

A0A6J1CGP3 uncharacterized protein PAM68-like

3.04e-82

70.43

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Query:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQ------NNNEDDDDEIPEAVYSRIITRILA
        MK+L CS+ QAL LS PPPW  R+ I N STIT NLTN +  ++RG V+VNAKGFT +P TAK RE  A+      N++ DDDDEI EAV +RIITRILA
Subjt:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQ------NNNEDDDDEIPEAVYSRIITRILA

Query:  FVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
        FVG+PMAFGV LLKIF+ IKEQ +WDVPIW+PF TTFLTFGAST+GIAYGTLS SLDPEK+GS+ GWEEAQKNWVEMWKEEDE  R
Subjt:  FVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR

SwissProt top hits

e value

%identity

Alignment

O49668 Protein PAM68, chloroplastic

1.9e-18

38.1

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Query:  TNSPRTAKNRETTAQNNNEDDDDE--------IPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLS
        +  P+     +    + +EDDDDE        IPE V +R+I+R+   VG+P+  G+     F  +K     DVP WVPF  +F+ FG +  G++YG +S
Subjt:  TNSPRTAKNRETTAQNNNEDDDDE--------IPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLS

Query:  TSLDPEKKGSVLGWEEAQKNWVEMWK
        +S DP ++GS+LGW EA+KNW   W+
Subjt:  TSLDPEKKGSVLGWEEAQKNWVEMWK

Q9LTD9 Uncharacterized protein PAM68-like

9.0e-29

42.05

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Query:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTI-TNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIP
        M++L CS  + L LS+      +T   N  T+  NN   +   L  G      KGF +S RT++  +    + + +DD  IP+ V+ R++ RI+  VG P
Subjt:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTI-TNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIP

Query:  MAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE
        +  GV +LK+ + +K++N+WDVP+WVP+ TT +TFG+S +GIAYG+LST+LDP K  S+ G +EA++NWVEMWKE+
Subjt:  MAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE

Arabidopsis top hits

e value

%identity

Alignment

AT4G19100.1 Protein of unknown function (DUF3464)

1.3e-19

38.1

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Query:  TNSPRTAKNRETTAQNNNEDDDDE--------IPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLS
        +  P+     +    + +EDDDDE        IPE V +R+I+R+   VG+P+  G+     F  +K     DVP WVPF  +F+ FG +  G++YG +S
Subjt:  TNSPRTAKNRETTAQNNNEDDDDE--------IPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLS

Query:  TSLDPEKKGSVLGWEEAQKNWVEMWK
        +S DP ++GS+LGW EA+KNW   W+
Subjt:  TSLDPEKKGSVLGWEEAQKNWVEMWK

AT5G52780.1 Protein of unknown function (DUF3464)

6.4e-30

42.05

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Query:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTI-TNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIP
        M++L CS  + L LS+      +T   N  T+  NN   +   L  G      KGF +S RT++  +    + + +DD  IP+ V+ R++ RI+  VG P
Subjt:  MKSLACSFPQALLLSNPPPWNQRTLIINHSTI-TNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIP

Query:  MAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE
        +  GV +LK+ + +K++N+WDVP+WVP+ TT +TFG+S +GIAYG+LST+LDP K  S+ G +EA++NWVEMWKE+
Subjt:  MAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE

Sequences

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CDS sequence

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ATGAAATCCCTTGCCTGTTCCTTTCCCCAGGCTCTCCTCCTTTCAAACCCTCCGCCATGGAATCAAAGAACTCTAATAATCAACCACTCAACTATCACGAACAATCTCAC
CAATTTCACACCGACATTATCCAGAGGCCAAGTCCAAGTAAACGCCAAAGGCTTCACTAATTCTCCACGCACGGCCAAAAACAGAGAAACCACCGCCCAAAACAATAACG
AAGACGACGACGATGAAATTCCAGAAGCCGTATACAGTAGGATTATAACGAGAATCTTGGCATTCGTTGGAATTCCGATGGCGTTCGGTGTGACATTGTTGAAGATTTTC
CAAGCGATTAAGGAGCAAAACCTTTGGGATGTGCCTATTTGGGTGCCATTTTTTACGACTTTCCTGACATTCGGAGCTTCGACGATGGGAATTGCTTACGGGACGTTATC
GACAAGTTTAGATCCGGAGAAGAAAGGATCTGTGTTGGGATGGGAAGAGGCGCAGAAGAATTGGGTTGAAATGTGGAAGGAAGAAGATGAAGGCAGGCGGTGA

mRNA sequence

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Protein sequence

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MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIF
QAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR

Cucsat.G4014 (gene) of Cucumber (B10) v3 genome