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Cucsat.G4029 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4029
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionSignal recognition particle 9 kDa protein
Genome locationctg105:2574149..2577780
RNA-Seq ExpressionCucsat.G4029
SyntenyCucsat.G4029
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0045900 - negative regulation of translational elongation (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571487.1 Signal recognition particle 9 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]6.48e-6797.09Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDP STRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGP+VDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

XP_004154105.1 signal recognition particle 9 kDa protein [Cucumis sativus]1.93e-68100Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

XP_022963515.1 signal recognition particle 9 kDa protein [Cucurbita moschata]1.59e-6798.06Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDP STRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

XP_022967500.1 signal recognition particle 9 kDa protein-like [Cucurbita maxima]9.21e-6797.09Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDP STRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKL+NIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

XP_038887366.1 signal recognition particle 9 kDa protein [Benincasa hispida]4.56e-6797.09Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVY+ASWDEFVERSVQLFRSDP STRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

TrEMBL top hitse value%identityAlignment
A0A0A0LIQ2 Signal recognition particle 9 kDa protein9.35e-69100Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

A0A1S3BLU0 Signal recognition particle 9 kDa protein9.35e-69100Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

A0A5D3E2L2 Signal recognition particle 9 kDa protein9.35e-69100Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

A0A6J1HI87 Signal recognition particle 9 kDa protein7.70e-6898.06Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDP STRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

A0A6J1HSA1 Signal recognition particle 9 kDa protein4.46e-6797.09Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDP STRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKL+NIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

SwissProt top hitse value%identityAlignment
O04438 Signal recognition particle 9 kDa protein1.3e-4380.58Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVY+ SW+EFVERSVQLFR DP +TRY +KYRHC+GKLVLKVTD+RECLKFKTDQAQDAKKMEKLNNIFF LM RGPDVDISEV+GK+Q + Q  KKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        R+Q
Subjt:  RKQ

P21262 Signal recognition particle 9 kDa protein1.5e-1245.21Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLM
        M    +W+EF   + +L+ +DP   R  +KYRH DG L +KVTD+  CL ++TDQAQD KK+EK ++    LM
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLM

P49458 Signal recognition particle 9 kDa protein1.5e-1248.53Show/hide
Query:  SWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLM
        +W+EF   + +L+ +DP   R  +KYRH DG L +KVTD+  CL +KTDQAQD KK+EK ++    LM
Subjt:  SWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLM

Q55GL2 Signal recognition particle 9 kDa protein6.5e-1649.3Show/hide
Query:  VYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTL
        +YI  WDEF ++S QL+R+DP  TR++ K+RH +GK+VLKVT++   LKF+TD+  D K+++++N++FF L
Subjt:  VYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTL

Q9SMU7 Signal recognition particle 9 kDa protein6.5e-4887.38Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFV+RSVQLFR+DP STRY +KYRHCDGKLVLKVTDN+ECLKFKTDQAQ+AKKMEKLNNIFFTLMARGPDVD+SEVTGK+Q++ QP KKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

Arabidopsis top hitse value%identityAlignment
AT3G49100.1 Signal recognition particle, SRP9/SRP14 subunit4.6e-4987.38Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFV+RSVQLFR+DP STRY +KYRHCDGKLVLKVTDN+ECLKFKTDQAQ+AKKMEKLNNIFFTLMARGPDVD+SEVTGK+Q++ QP KKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACATAGCTTCGTGGGATGAATTCGTCGAGCGTTCTGTCCAATTGTTCCGTTCCGATCCCACCTCCACGAGGTATAACATAAAGTATCGACACTGCGATGGGAA
ACTGGTTCTTAAAGTCACCGATAACCGTGAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGATGCTAAGAAGATGGAAAAGCTCAACAACATATTCTTCACTCTGATGG
CCCGGGGCCCTGATGTGGATATATCAGAAGTGACAGGCAAGGACCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACATAGCTTCGTGGGATGAATTCGTCGAGCGTTCTGTCCAATTGTTCCGTTCCGATCCCACCTCCACGAGGTATAACATAAAGTATCGACACTGCGATGGGAA
ACTGGTTCTTAAAGTCACCGATAACCGTGAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGATGCTAAGAAGATGGAAAAGCTCAACAACATATTCTTCACTCTGATGG
CCCGGGGCCCTGATGTGGATATATCAGAAGTGACAGGCAAGGACCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA
Protein sequenceShow/hide protein sequence
MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ