CuGenDBv2

Gene ID	Cucsat.G407
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Chromatin assembly factor 1 subunit A
Genome location	ctg1:8528673..8531856
RNA-Seq Expression	Cucsat.G407
Synteny	Cucsat.G407
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6582480.1 hypothetical protein SDJN03_22482, partial [Cucurbita argyrosperma subsp. sororia]

1.63e-94

82.9

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MA  S S IR ATNLSNNLLRSFSTSIK+A HNNH QT +YLEA++F+GSW+APK+PKEAQA+LA LRR+YAKQVKQVRKNYIQEVE+LRLE+++KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAK RAEERKVADEEFR TL+KER EKLEHWRMMEKKREEKKKEK E +RRQSSMWVDE KLEEKLL+AIVNTI L
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

XP_004133989.1 chromatin assembly factor 1 subunit A [Cucumis sativus]

3.79e-116

100

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

XP_008438350.1 PREDICTED: LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A [Cucumis melo]

1.58e-108

93.26

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MAFASGSVIRNATNLSNNLLRSFSTSIK+A +NNHLQT EYLEANSFIGSWQAPK+PKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAKVRAEERK+ADEEFRLTL+KERAEKLEHWRMMEKKREEK KEKKELLRRQSS W+DENKLEEKLLEAIVNT+TL
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

XP_022980429.1 uncharacterized protein LOC111479798 [Cucurbita maxima]

2.82e-95

83.42

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MA  S S IR+ATNLSNNLLRSFSTSIK+A HNNH QT +YLEA++F+GSW+APK+PKEAQA+LA LRR+YAKQVKQVRKNYIQEVELLRLE++ KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAK RAEERKVADEEFR TL+KER EKLEHWRMMEKKREEKKKEK E++RRQSSMWVDE KLEEKLL+AIVNTI L
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

XP_038892259.1 chromatin assembly factor 1 subunit A [Benincasa hispida]

4.89e-96

83.94

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MAF   S IR AT+LSNNLLRS STS K+A HNNH QT +YLEAN+FIGSW+APK+PKEAQA+LA+LRR+YAKQ+KQVRKNYIQEVELLRLE+E+KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAKVRAEERKVADEEFRLTL+KERAEKLEHWRMMEKKR+EKKKEK +LLRRQSS+WVDENKLEEKLL+AIVNT  L
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7X4 Uncharacterized protein

1.83e-116

100

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

A0A1S3AWS6 LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A

7.64e-109

93.26

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MAFASGSVIRNATNLSNNLLRSFSTSIK+A +NNHLQT EYLEANSFIGSWQAPK+PKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAKVRAEERK+ADEEFRLTL+KERAEKLEHWRMMEKKREEK KEKKELLRRQSS W+DENKLEEKLLEAIVNT+TL
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

A0A6J1E8D4 UPF0329 protein ECU05_1680/ECU11_0050-like

2.26e-94

82.38

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MA  S S IR ATN+SNNLLRSFSTSIK+A HNNH QT +YLEA++F+GSW+APK+PKEAQA+LA LRR+YAKQVKQVRKNYIQEVE+LRLE+++KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAK RAEERKVADEEFR TL+KER EKLEHWRMMEKKREEKKKEK E +RRQSSMWVDE KLEEKLL+AIVNTI L
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

A0A6J1FLI1 UPF0329 protein ECU05_1680/ECU11_0050-like

1.76e-91

80.83

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MAFAS S IR ATN S+ LLRSFSTS K+A HNNH QT +YLEAN+F+GSW+APK+PKEAQARLA LRR+YAK+VKQVRKNYIQEVELLRLE+++KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRV NEERKKLKAEAAK RAEERKVADEEFR TL+KERAEKLEHWRMMEK REEKK EK EL+RRQS MW+DE KLEEKLL+AIVNT  L
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

A0A6J1IZ92 uncharacterized protein LOC111479798

1.37e-95

83.42

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK
        MA  S S IR+ATNLSNNLLRSFSTSIK+A HNNH QT +YLEA++F+GSW+APK+PKEAQA+LA LRR+YAKQVKQVRKNYIQEVELLRLE++ KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAK

Query:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAK RAEERKVADEEFR TL+KER EKLEHWRMMEKKREEKKKEK E++RRQSSMWVDE KLEEKLL+AIVNTI L
Subjt:  KEALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G49210.1 unknown protein

2.6e-45

58.62

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Query:  LRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAA
        LRSFS       H  H +T  +LE   +IGSW+AP +PK+A+ +LA+LRR+YAK+V+  RK YI E+E+LR+E+++KDEA+  A R ANEER+ LKAEAA
Subjt:  LRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAA

Query:  KVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        KVRAEERK+ADEEFR TL+KERAEKLE W+MM +KREEK KE+++LLR QSS+W+++ +LE K+ EA+V+ + L
Subjt:  KVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

AT5G49210.2 unknown protein

2.6e-45

58.62

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Query:  LRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAA
        LRSFS       H  H +T  +LE   +IGSW+AP +PK+A+ +LA+LRR+YAK+V+  RK YI E+E+LR+E+++KDEA+  A R ANEER+ LKAEAA
Subjt:  LRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEERKKLKAEAA

Query:  KVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL
        KVRAEERK+ADEEFR TL+KERAEKLE W+MM +KREEK KE+++LLR QSS+W+++ +LE K+ EA+V+ + L
Subjt:  KVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

Sequences

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CDS sequence

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ATGGCGTTTGCGTCTGGTTCCGTGATCCGCAATGCAACCAATCTCTCTAATAACCTTCTTCGTTCCTTCTCCACTTCCATCAAAACCGCTCAACATAACAATCACCTGCA
GACCCAAGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCCCCGAAAAACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTATGCCAAGC
AGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAGGGAGCAGAAGGACGAAGCCAAGAAAGAAGCGCTTAGGGTTGCCAATGAGGAA
CGCAAGAAGCTTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGACTGACTTTGGTGAAAGAAAGAGCTGAGAAGTTGGAGCA
TTGGAGAATGATGGAAAAGAAGAGGGAAGAAAAAAAGAAAGAAAAGAAGGAGCTACTAAGACGGCAGAGTTCCATGTGGGTTGATGAAAATAAATTGGAAGAGAAGCTAT
TAGAAGCCATTGTTAATACCATCACTCTCTGA

mRNA sequence

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Protein sequence

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MAFASGSVIRNATNLSNNLLRSFSTSIKTAQHNNHLQTQEYLEANSFIGSWQAPKNPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEREQKDEAKKEALRVANEE
RKKLKAEAAKVRAEERKVADEEFRLTLVKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSMWVDENKLEEKLLEAIVNTITL

Cucsat.G407 (gene) of Cucumber (B10) v3 genome