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Cucsat.G4108 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4108
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionTransmembrane protein
Genome locationctg105:4344382..4345305
RNA-Seq ExpressionCucsat.G4108
SyntenyCucsat.G4108
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3434655.1 hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis]4.88e-4062.02Show/hide
Query:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSR-LINFGFRRSPTG
        M+ FYPKRRGPEWK+G TG  QTL+S+S PP+ LL IFGIVIVLLWFSQ+  G++AQL ++   FQLFL +LPI +IFFM  YSSS    NF  RR P  
Subjt:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSR-LINFGFRRSPTG

Query:  LAQRGASPWTIAILVLLILVLLYYQSSFH
          + G SPW +AIL++L+LVLL YQSSFH
Subjt:  LAQRGASPWTIAILVLLILVLLYYQSSFH

KAG7010871.1 hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyrosperma]1.34e-4065.12Show/hide
Query:  MDCFYPKRRGPEWKRGLTGTGQTLS-SVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTG
        M+   PKRRGPEWK+    TGQTL  SVS PP QLL IFGIVIVLLWFSQ   G++ Q++RS   FQL LFLLPI VIFFM SYS   LIN    RS TG
Subjt:  MDCFYPKRRGPEWKRGLTGTGQTLS-SVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTG

Query:  LAQRGASPWTIAILVLLILVLLYYQSSFH
          +RGASP TI ILV LILVLLY++ SFH
Subjt:  LAQRGASPWTIAILVLLILVLLYYQSSFH

KGN61894.1 hypothetical protein Csa_005908 [Cucumis sativus]3.28e-84100Show/hide
Query:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRSFQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQR
        MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRSFQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQR
Subjt:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRSFQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQR

Query:  GASPWTIAILVLLILVLLYYQSSFH
        GASPWTIAILVLLILVLLYYQSSFH
Subjt:  GASPWTIAILVLLILVLLYYQSSFH

PON55102.1 Transmembrane protein [Parasponia andersonii]2.90e-3757.69Show/hide
Query:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRS--PT
        M  FYPKRRGP+WK+G T   QT++SVS P   LL IF IV+VLLW SQ+  GH+AQL ++   FQLF+FLLP+ +I FM SYSS  L NF FRR    T
Subjt:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRS--PT

Query:  GLAQRGASPWTIAILVLLILVLLYYQSSFH
         +   G+SPW +A+ V L+LVLL YQSSFH
Subjt:  GLAQRGASPWTIAILVLLILVLLYYQSSFH

PON83413.1 Transmembrane protein [Trema orientale]5.84e-3756.92Show/hide
Query:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRS--PT
        M+ FYPKRRGP+WK+G T   QT++S+S P   LL IF IV+VLLW SQ+  G++AQL ++   FQLF+FLLP+ +I FM SYSSS L NF FRR    T
Subjt:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRS--PT

Query:  GLAQRGASPWTIAILVLLILVLLYYQSSFH
         +   G+SPW +A  V L+LVLL YQSSFH
Subjt:  GLAQRGASPWTIAILVLLILVLLYYQSSFH

TrEMBL top hitse value%identityAlignment
A0A0A0LLH8 Uncharacterized protein1.59e-84100Show/hide
Query:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRSFQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQR
        MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRSFQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQR
Subjt:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRSFQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQR

Query:  GASPWTIAILVLLILVLLYYQSSFH
        GASPWTIAILVLLILVLLYYQSSFH
Subjt:  GASPWTIAILVLLILVLLYYQSSFH

A0A2P5C233 Transmembrane protein1.40e-3757.69Show/hide
Query:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRS--PT
        M  FYPKRRGP+WK+G T   QT++SVS P   LL IF IV+VLLW SQ+  GH+AQL ++   FQLF+FLLP+ +I FM SYSS  L NF FRR    T
Subjt:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRS--PT

Query:  GLAQRGASPWTIAILVLLILVLLYYQSSFH
         +   G+SPW +A+ V L+LVLL YQSSFH
Subjt:  GLAQRGASPWTIAILVLLILVLLYYQSSFH

A0A2P5ED06 Transmembrane protein2.83e-3756.92Show/hide
Query:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRS--PT
        M+ FYPKRRGP+WK+G T   QT++S+S P   LL IF IV+VLLW SQ+  G++AQL ++   FQLF+FLLP+ +I FM SYSSS L NF FRR    T
Subjt:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRS--PT

Query:  GLAQRGASPWTIAILVLLILVLLYYQSSFH
         +   G+SPW +A  V L+LVLL YQSSFH
Subjt:  GLAQRGASPWTIAILVLLILVLLYYQSSFH

B9H148 Uncharacterized protein8.07e-3757.69Show/hide
Query:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGL
        M+ FYPKRRGPEWK+G TG  QT++S+S PP  LL IFGIVI LLW S +  G+EAQL  S    Q+FLFLLPI +I FM SYS++ L+ +  R SP   
Subjt:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGL

Query:  AQRGAS--PWTIAILVLLILVLLYYQSSFH
        A R  S  PW IA+ V+L+L+LL YQSSFH
Subjt:  AQRGAS--PWTIAILVLLILVLLYYQSSFH

W9QKI2 Uncharacterized protein6.04e-3756.06Show/hide
Query:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGL
        M+ FYPKRRGPEWK+G T   QT++S+SPPP  LL IF IV+VLLW SQ+  G++AQL ++   FQ FLFL PI +I FM SYSSS   NF  RR     
Subjt:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGL

Query:  AQR----GASPWTIAILVLLILVLLYYQSSFH
        + +    G+SPW +AI V+L+L+LL YQSSFH
Subjt:  AQR----GASPWTIAILVLLILVLLYYQSSFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein7.6e-0634.21Show/hide
Query:  SVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRSFQL--FLFLLPIFVIF-------------FMYSYSSSRLINFGFRRSPTGLAQRGASPWTIAIL
        S+SP P  +L+I  +  V L  S + +  EA  +   Q+   L L+P+F+I               +  +SSSR   +    SP      G+SPW +A L
Subjt:  SVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRSFQL--FLFLLPIFVIF-------------FMYSYSSSRLINFGFRRSPTGLAQRGASPWTIAIL

Query:  VLLILVLLYYQSSF
        ++L+LVLL YQSSF
Subjt:  VLLILVLLYYQSSF

AT5G42146.1 unknown protein4.3e-0931.82Show/hide
Query:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQF-NAGHEAQLN-RSFQLFLFLLPIFVIFFMYSYSSSRLINFGFRRS-----
        M  F  +RRG  WKRG     +TL + S PP+ LL +  I+ +LL+ S +    +E +    + +LF+  LPI  +F + S S    + F    S     
Subjt:  MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQF-NAGHEAQLN-RSFQLFLFLLPIFVIFFMYSYSSSRLINFGFRRS-----

Query:  PTGLAQRGASPWTIAILVLLILVLLYYQSSFH
           L   G  PW + ++++L+L+L+  QS FH
Subjt:  PTGLAQRGASPWTIAILVLLILVLLYYQSSFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGTTTTTATCCAAAAAGAAGAGGTCCAGAGTGGAAACGAGGATTGACAGGCACAGGCCAAACCCTAAGCTCTGTTTCTCCTCCACCAATTCAATTGCTCATCAT
TTTTGGCATTGTCATTGTGTTGCTATGGTTTTCTCAGTTCAATGCTGGCCATGAAGCTCAATTGAATAGAAGTTTTCAGCTGTTTCTTTTCTTGTTGCCCATCTTTGTTA
TTTTCTTCATGTATTCATATTCCTCCAGTCGACTTATCAACTTCGGATTTCGCCGATCACCAACCGGGTTGGCTCAACGAGGTGCCTCGCCTTGGACTATTGCCATTTTG
GTCCTTCTCATTCTGGTTTTGCTTTATTATCAATCCTCATTCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGTTTTTATCCAAAAAGAAGAGGTCCAGAGTGGAAACGAGGATTGACAGGCACAGGCCAAACCCTAAGCTCTGTTTCTCCTCCACCAATTCAATTGCTCATCAT
TTTTGGCATTGTCATTGTGTTGCTATGGTTTTCTCAGTTCAATGCTGGCCATGAAGCTCAATTGAATAGAAGTTTTCAGCTGTTTCTTTTCTTGTTGCCCATCTTTGTTA
TTTTCTTCATGTATTCATATTCCTCCAGTCGACTTATCAACTTCGGATTTCGCCGATCACCAACCGGGTTGGCTCAACGAGGTGCCTCGCCTTGGACTATTGCCATTTTG
GTCCTTCTCATTCTGGTTTTGCTTTATTATCAATCCTCATTCCATTGA
Protein sequenceShow/hide protein sequence
MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNRSFQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQRGASPWTIAIL
VLLILVLLYYQSSFH