; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G4120 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4120
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPre-mRNA-splicing factor SYF2
Genome locationctg105:4704499..4707225
RNA-Seq ExpressionCucsat.G4120
SyntenyCucsat.G4120
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0071014 - post-mRNA release spliceosomal complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457705.1 PREDICTED: pre-mRNA-splicing factor syf2 [Cucumis melo]1.52e-21998.1Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEE VEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_011649295.1 pre-mRNA-splicing factor syf2 [Cucumis sativus]5.79e-224100Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_022943827.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata]9.45e-21495.24Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCFKVIAE+KAR+Q+NEPVPTSSE VQAGRSSGSS+FVPPDEYEDL DEKP+EEGHSDGD DKFSG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_022986094.1 pre-mRNA-splicing factor syf2-like [Cucurbita maxima]2.71e-21394.92Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCFKVIAE+KAR+Q+NEPVPTSSE VQAGRSSGSS+FVPPDEYEDL DEKP+EEGHSDGD DKFSG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_038900868.1 pre-mRNA-splicing factor syf2 [Benincasa hispida]3.06e-21496.83Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFKVIAE+KARSQKNEPVPT SE VQAG S GSS+FVPPDEYEDLHDEKPDE GHSDGD+DKFSGEENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

TrEMBL top hitse value%identityAlignment
A0A0A0LJ81 Pre-mRNA-splicing factor SYF22.80e-224100Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A1S3C6T5 Pre-mRNA-splicing factor SYF27.38e-22098.1Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEE VEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A5A7TRR3 Pre-mRNA-splicing factor SYF27.38e-22098.1Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEE VEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1FXE9 Pre-mRNA-splicing factor SYF24.57e-21495.24Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCFKVIAE+KAR+Q+NEPVPTSSE VQAGRSSGSS+FVPPDEYEDL DEKP+EEGHSDGD DKFSG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1JD37 Pre-mRNA-splicing factor SYF21.31e-21394.92Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCFKVIAE+KAR+Q+NEPVPTSSE VQAGRSSGSS+FVPPDEYEDL DEKP+EEGHSDGD DKFSG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

SwissProt top hitse value%identityAlignment
Q28G05 Pre-mRNA-splicing factor syf21.6e-2538.53Show/hide
Query:  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDV
        K   R +K  E+ LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   ANG+D  +A +L+ + E AE   +K ++     G+  
Subjt:  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDV

Query:  FNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERA
        +    L   Y++ TK +  D+EEY   K+   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++D DID IN+RN  FNKK ER 
Subjt:  FNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERA

Query:  FGRYTLEIKNNLERGTAL
        +G+YT EIK NLERGTA+
Subjt:  FGRYTLEIKNNLERGTAL

Q4QRB2 Pre-mRNA-splicing factor SYF21.2e-2338.6Show/hide
Query:  RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDVFNQK
        R +K  E+ LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A G D  K  +L+ + E AE   ++ +K     G+  +   
Subjt:  RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNIDLEEYNKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNIDLEEYNKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Q6DV01 Pre-mRNA-splicing factor syf29.0e-2437.67Show/hide
Query:  KKLFEIRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDVFNQK
        +K  E+ LK NEARK N   +  E K+++ P+      S+ +W   +E++KK+      A G D  +  +L+ + E AE   +K +K     G+  +   
Subjt:  KKLFEIRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNIDLEEYNKMK-ESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         +   Y++ T+ +  DLE+Y K++ ES  EFY  ++SL +G      E  +D MV++L+ + +KR+ +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNIDLEEYNKMK-ESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Q8AVQ6 Pre-mRNA-splicing factor syf25.6e-2638.99Show/hide
Query:  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDV
        K   R +K  E+ LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   ANG+D  +A +L+ + E AE   +K ++     G+  
Subjt:  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDV

Query:  FNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERA
        +    L   Y++ TK +  D+EEY   KE   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++D DID IN+RN  FNKK ER 
Subjt:  FNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERA

Query:  FGRYTLEIKNNLERGTAL
        +G+YT EIK NLERGTA+
Subjt:  FGRYTLEIKNNLERGTAL

Q9D198 Pre-mRNA-splicing factor SYF21.2e-2338.6Show/hide
Query:  RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDVFNQK
        R +K  E+ LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A G D  K  +L+ + E AE   ++ +K     G+  +   
Subjt:  RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNIDLEEYNKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNIDLEEYNKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Arabidopsis top hitse value%identityAlignment
AT2G16860.1 GCIP-interacting family protein3.5e-11669.52Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        M  E RVHPDC NASNPYHEC EYCFK IAE KAR +K              +++G +  V     E L D++ +E+   + + ++ + E  V  D T+L
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT
        TGR+KKLFE+RLKMNEARK+NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAE+KYKKWEK+P P GWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKN+ +DLEEYN+M+ +DPEFYREASSLQYGKAPK S+DKID M KEL DR++KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+YT
Subjt:  LYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

AT4G38560.1 Arabidopsis phospholipase-like protein (PEARLI 4) family8.1e-0461.54Show/hide
Query:  GRVHPDCRNASNPYHECSEYCFKVIA
        G VH DC N+ NPYHEC + CFK I+
Subjt:  GRVHPDCRNASNPYHECSEYCFKVIA

AT4G38560.2 Arabidopsis phospholipase-like protein (PEARLI 4) family8.1e-0461.54Show/hide
Query:  GRVHPDCRNASNPYHECSEYCFKVIA
        G VH DC N+ NPYHEC + CFK I+
Subjt:  GRVHPDCRNASNPYHECSEYCFKVIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTGAATTGAAAGCCCGGAGTCA
GAAAAACGAGCCAGTTCCCACTTCATCAGAAACTGTACAAGCTGGTCGAAGTAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGC
CTGATGAAGAAGGGCACAGTGATGGTGATCTTGACAAATTTAGTGGCGAGGAAAATGTGGAAGGAGACTTCACAAAGCTCACGGGGAGGAAGAAGAAATTGTTTGAAATT
AGGCTTAAGATGAATGAGGCTCGGAAAGCTAATCAAACAGCAATTGCTGCTGAGAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCT
TGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCAGAAAACAAATATAAGAAAT
GGGAGAAGGATCCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACGTTGTATAATGCATACAAAAAGAGGACGAAGAATGTAAATATTGACCTTGAGGAATATAAT
AAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAGTATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAA
AGACCGAGATGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGC
GGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCCTTACCTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTGAATTGAAAGCCCGGAGTCA
GAAAAACGAGCCAGTTCCCACTTCATCAGAAACTGTACAAGCTGGTCGAAGTAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGC
CTGATGAAGAAGGGCACAGTGATGGTGATCTTGACAAATTTAGTGGCGAGGAAAATGTGGAAGGAGACTTCACAAAGCTCACGGGGAGGAAGAAGAAATTGTTTGAAATT
AGGCTTAAGATGAATGAGGCTCGGAAAGCTAATCAAACAGCAATTGCTGCTGAGAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCT
TGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCAGAAAACAAATATAAGAAAT
GGGAGAAGGATCCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACGTTGTATAATGCATACAAAAAGAGGACGAAGAATGTAAATATTGACCTTGAGGAATATAAT
AAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAGTATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAA
AGACCGAGATGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGC
GGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCCTTACCTGATTAA
Protein sequenceShow/hide protein sequence
MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEI
RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYN
KMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD