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Cucsat.G4157 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4157
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
Genome locationctg1055:28924..31978
RNA-Seq ExpressionCucsat.G4157
SyntenyCucsat.G4157
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0031047 - gene silencing by RNA (biological process)
GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR036748 - MTH938-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAD4386214.1 hypothetical protein E3N88_26383 [Mikania micrantha]2.61e-0766.04Show/hide
Query:  FSQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS
        + QPL P IR +  S   +L A+  RNA+STYNILNEEGRIVAAALLPYGV+S
Subjt:  FSQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS

KAE8650668.1 hypothetical protein Csa_011092, partial [Cucumis sativus]3.44e-3585.37Show/hide
Query:  FAKQPYTSRSAPQD-----RPLPFRRCPVQICTVFASCSVSVEAEPPCEAVTATSAAHNRHPPIPSPPLSALPGRKPGFSQP
        FAKQPYTSRSA         PLPFR CPVQICTVFASCSVSVEAEPPCEAVTATSAAHNR PPIPSPPLSALP RKPGFSQP
Subjt:  FAKQPYTSRSAPQD-----RPLPFRRCPVQICTVFASCSVSVEAEPPCEAVTATSAAHNRHPPIPSPPLSALPGRKPGFSQP

KGN51474.2 hypothetical protein Csa_008783 [Cucumis sativus]7.66e-4153.3Show/hide
Query:  PYAATTPPSPSPFLLFSFR-SLPSFF---------------PPQPNRPILPLLSVREAKPPPTDLHSSSPSRSQPRRKSSPPFPSIFFFRPQPCRNPS--
        P  A TPP PS    FSF  S PS F               P  P+ P  P       +P    L     S +  RR +S PF S         R+P+  
Subjt:  PYAATTPPSPSPFLLFSFR-SLPSFF---------------PPQPNRPILPLLSVREAKPPPTDLHSSSPSRSQPRRKSSPPFPSIFFFRPQPCRNPS--

Query:  LPFSSSLQFAKQPYT-------SRSAPQDRPLPFRRCPVQICTVFASCSVSVEAEPPCEAVTATSAAHNRHPPIPSPPLSALPGRKPGFSQPLPSIR
        LPF   L F+ Q          SRSAPQDRPLPFRRCPVQICT+FASCSVSVEAEPPCEAVTATSAAHNR PPIPSPPLSALP RKPGFSQPL S+R
Subjt:  LPFSSSLQFAKQPYT-------SRSAPQDRPLPFRRCPVQICTVFASCSVSVEAEPPCEAVTATSAAHNRHPPIPSPPLSALPGRKPGFSQPLPSIR

XP_031737544.1 uncharacterized protein LOC116402433 [Cucumis sativus]2.51e-3584.34Show/hide
Query:  QFAKQPYTSRSAPQD-----RPLPFRRCPVQICTVFASCSVSVEAEPPCEAVTATSAAHNRHPPIPSPPLSALPGRKPGFSQP
        +FAKQPYTSRSA         PLPFR CPVQICTVFASCSVSVEAEPPCEAVTATSAAHNR PPIPSPPLSALP RKPGFSQP
Subjt:  QFAKQPYTSRSAPQD-----RPLPFRRCPVQICTVFASCSVSVEAEPPCEAVTATSAAHNRHPPIPSPPLSALPGRKPGFSQP

XP_031741741.1 extensin-like [Cucumis sativus]3.70e-4153.3Show/hide
Query:  PYAATTPPSPSPFLLFSFR-SLPSFF---------------PPQPNRPILPLLSVREAKPPPTDLHSSSPSRSQPRRKSSPPFPSIFFFRPQPCRNPS--
        P  A TPP PS    FSF  S PS F               P  P+ P  P       +P    L     S +  RR +S PF S         R+P+  
Subjt:  PYAATTPPSPSPFLLFSFR-SLPSFF---------------PPQPNRPILPLLSVREAKPPPTDLHSSSPSRSQPRRKSSPPFPSIFFFRPQPCRNPS--

Query:  LPFSSSLQFAKQPYT-------SRSAPQDRPLPFRRCPVQICTVFASCSVSVEAEPPCEAVTATSAAHNRHPPIPSPPLSALPGRKPGFSQPLPSIR
        LPF   L F+ Q          SRSAPQDRPLPFRRCPVQICT+FASCSVSVEAEPPCEAVTATSAAHNR PPIPSPPLSALP RKPGFSQPL S+R
Subjt:  LPFSSSLQFAKQPYT-------SRSAPQDRPLPFRRCPVQICTVFASCSVSVEAEPPCEAVTATSAAHNRHPPIPSPPLSALPGRKPGFSQPLPSIR

TrEMBL top hitse value%identityAlignment
A0A251UTV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 31.26e-0766.04Show/hide
Query:  FSQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS
        + QP+ P IR +  S   +L A+  RNA+STYNILNEEGRIVAAALLPYGVSS
Subjt:  FSQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS

A0A444XEJ2 Uncharacterized protein1.39e-0764.15Show/hide
Query:  FSQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS
        + QP+ P +R +  S   +L A+  RNA STYNILNEEGRIVAAALLPYGVSS
Subjt:  FSQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS

A0A5N5K8Z5 Uncharacterized protein1.53e-0760.38Show/hide
Query:  FSQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS
        ++QP+ P +R +  S   +L A+  RNA STYNILNEEGR+VAAALLPYG+SS
Subjt:  FSQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS

A0A5N6N7I9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 31.26e-0766.04Show/hide
Query:  FSQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS
        + QPL P IR +  S   +L A+  RNA+STYNILNEEGRIVAAALLPYGV+S
Subjt:  FSQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS

V4L1C6 Uncharacterized protein (Fragment)1.57e-0761.54Show/hide
Query:  SQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS
        +QPL P +R +  S   +L  +  RNA STYNILNEEGRIVAAALLPYG++S
Subjt:  SQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G44525.1 Protein of unknown function (DUF498/DUF598)3.7e-0861.7Show/hide
Query:  PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS
        P +R +  S   +L  +  RNA STYNILNEEGR+VAAALLPYGV+S
Subjt:  PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS

AT3G60150.1 Protein of unknown function (DUF498/DUF598)1.7e-0860.38Show/hide
Query:  FSQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS
        ++ PL P +R +  S   +L  +  RNA STYNILNEEGRIVAAALLPYGV+S
Subjt:  FSQPL-PSIRPYQSS---RLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGCCTCTTCTCCTTCCTTCCGTACGCCGCGACGACTCCACCGTCTCCTTCTCCTTTCCTTCTCTTTTCTTTCCGTTCCCTTCCGTCTTTCTTTCCGCCGCAGCCCAACCG
CCCCATCCTTCCCCTTCTCTCCGTTCGCGAAGCAAAACCGCCACCGACCGACCTCCATTCCTCTTCTCCTTCCCGTTCGCAGCCCCGCCGCAAATCGTCGCCTCCCTTCC
CTTCCATTTTCTTCTTCCGTCCGCAGCCCTGCCGCAACCCTTCCCTTCCATTTTCCTCTTCTCTTCAGTTCGCAAAGCAGCCGTACACGTCCAGATCTGCACCGCAAGAC
CGCCCGTTGCCCTTCCGCCGCTGCCCGGTCCAGATCTGCACCGTTTTCGCGTCTTGTTCTGTCTCCGTCGAAGCCGAGCCACCGTGTGAAGCAGTAACCGCCACGTCCGC
CGCTCACAACCGCCATCCACCGATCCCTTCTCCTCCGTTGTCTGCACTACCGGGCCGGAAGCCTGGTTTCAGCCAGCCTCTGCCGTCGATCAGACCTTATCAATCTTCCA
GATTGTGCGCCCTATTCCAGAGAAATGCGACATCAACTTATAATATCCTAAATGAGGAGGGTAGAATTGTAGCTGCAGCGCTTCTGCCTTATGGAGTTTCTTCATGA
mRNA sequenceShow/hide mRNA sequence
CGCCTCTTCTCCTTCCTTCCGTACGCCGCGACGACTCCACCGTCTCCTTCTCCTTTCCTTCTCTTTTCTTTCCGTTCCCTTCCGTCTTTCTTTCCGCCGCAGCCCAACCG
CCCCATCCTTCCCCTTCTCTCCGTTCGCGAAGCAAAACCGCCACCGACCGACCTCCATTCCTCTTCTCCTTCCCGTTCGCAGCCCCGCCGCAAATCGTCGCCTCCCTTCC
CTTCCATTTTCTTCTTCCGTCCGCAGCCCTGCCGCAACCCTTCCCTTCCATTTTCCTCTTCTCTTCAGTTCGCAAAGCAGCCGTACACGTCCAGATCTGCACCGCAAGAC
CGCCCGTTGCCCTTCCGCCGCTGCCCGGTCCAGATCTGCACCGTTTTCGCGTCTTGTTCTGTCTCCGTCGAAGCCGAGCCACCGTGTGAAGCAGTAACCGCCACGTCCGC
CGCTCACAACCGCCATCCACCGATCCCTTCTCCTCCGTTGTCTGCACTACCGGGCCGGAAGCCTGGTTTCAGCCAGCCTCTGCCGTCGATCAGACCTTATCAATCTTCCA
GATTGTGCGCCCTATTCCAGAGAAATGCGACATCAACTTATAATATCCTAAATGAGGAGGGTAGAATTGTAGCTGCAGCGCTTCTGCCTTATGGAGTTTCTTCATGA
Protein sequenceShow/hide protein sequence
RLFSFLPYAATTPPSPSPFLLFSFRSLPSFFPPQPNRPILPLLSVREAKPPPTDLHSSSPSRSQPRRKSSPPFPSIFFFRPQPCRNPSLPFSSSLQFAKQPYTSRSAPQD
RPLPFRRCPVQICTVFASCSVSVEAEPPCEAVTATSAAHNRHPPIPSPPLSALPGRKPGFSQPLPSIRPYQSSRLCALFQRNATSTYNILNEEGRIVAAALLPYGVSS