; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G4234 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4234
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionprotein COP1 SUPPRESSOR 2-like
Genome locationctg109:63280..66052
RNA-Seq ExpressionCucsat.G4234
SyntenyCucsat.G4234
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
InterPro domainsIPR010756 - Telomere length and silencing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601926.1 Protein COP1 SUPPRESSOR 2, partial [Cucurbita argyrosperma subsp. sororia]2.48e-11296.09Show/hide
Query:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
        MVEDPNMLKYIEQELAKKRGRTVE VEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS S
Subjt:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS

Query:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
        EFSIPSSYSADYFHRGRDYAEKLRREHPELYK+R+LQDDGSGSKP ++GTEAAGQRQAATDEFMLERFRKRERHRVMRR
Subjt:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR

KAG7032622.1 putative protein C9orf78 [Cucurbita argyrosperma subsp. argyrosperma]2.56e-11296.09Show/hide
Query:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
        MVEDPNMLKYIEQELAKKRGRTVE VEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS S
Subjt:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS

Query:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
        EFSIPSSYSADYFHRGRDYAEKLRREHPELYK+R+LQDDGSGSKP ++GTEAAGQRQAATDEFMLERFRKRERHRVMRR
Subjt:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR

XP_008466165.1 PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis melo]6.13e-11699.44Show/hide
Query:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
        MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS S
Subjt:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS

Query:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
        EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
Subjt:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR

XP_011654560.1 protein COP1 SUPPRESSOR 2 [Cucumis sativus]7.76e-117100Show/hide
Query:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
        MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
Subjt:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS

Query:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
        EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
Subjt:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR

XP_022146355.1 uncharacterized protein C9orf78 homolog [Momordica charantia]1.03e-11296.65Show/hide
Query:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
        MVEDPNML YIEQELAKKRGRTVE VEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS S
Subjt:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS

Query:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
        EFSIPSSYSADYFHRGRDYAEKLRR+HPELYKDRSLQDDGSGSKP +TGTEAAGQRQAATDEFMLERFRKRERHRVMRR
Subjt:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR

TrEMBL top hitse value%identityAlignment
A0A0A0KLP5 Uncharacterized protein6.04e-117100Show/hide
Query:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
        MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
Subjt:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS

Query:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
        EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
Subjt:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR

A0A1S3CQV4 uncharacterized protein C9orf78 homolog2.97e-11699.44Show/hide
Query:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
        MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS S
Subjt:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS

Query:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
        EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
Subjt:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR

A0A5D3BEG5 Hepatocellular carcinoma-associated antigen 592.97e-11699.44Show/hide
Query:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
        MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS S
Subjt:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS

Query:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
        EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
Subjt:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR

A0A6J1CX27 uncharacterized protein C9orf78 homolog4.97e-11396.65Show/hide
Query:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
        MVEDPNML YIEQELAKKRGRTVE VEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS S
Subjt:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS

Query:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
        EFSIPSSYSADYFHRGRDYAEKLRR+HPELYKDRSLQDDGSGSKP +TGTEAAGQRQAATDEFMLERFRKRERHRVMRR
Subjt:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR

A0A6J1JM60 protein COP1 SUPPRESSOR 2-like1.24e-11296.09Show/hide
Query:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
        MVEDPNMLKYIEQELAKKRGRTVE VEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRS S
Subjt:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS

Query:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR
        EFSIPSSYSADYFHRGRDYAEKLRREHPELYK+R+LQDDGSGSKP ++GTEAAGQRQAATDEFMLERFRKRERHRVMRR
Subjt:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR

SwissProt top hitse value%identityAlignment
F4HVZ5 Protein COP1 SUPPRESSOR 21.3e-6772.97Show/hide
Query:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
        ++EDPNM+KYIEQELAKKRGR ++  E  EN+LK+ EDELYKIP+HLKVK+R+S ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQE+R +GR  S
Subjt:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS

Query:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDR-SLQDDGSGSKPAETGT-----EAAGQRQAATDEFMLERFRKRERHRVMRR
        EFSIPSSYSADYF RG+DYAEKLRREHPELYKDR   Q DG  +KP+ + +     ++   RQAATD+ MLERFRKRER+RVMRR
Subjt:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDR-SLQDDGSGSKPAETGT-----EAAGQRQAATDEFMLERFRKRERHRVMRR

Q3TQI7 Telomere length and silencing protein 1 homolog4.0e-1335.56Show/hide
Query:  EDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGRST
        ED +M+KYIE EL K++G   +  + A+   K AED LY++PE+++V      E   S Q  +GI EV L I+ K+KNI  TE AK +LL E++   + +
Subjt:  EDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGRST

Query:  SEFSIPSSYSADYFHRGRDYAEKLR---REHPELYKDRSLQDDGSGSKPAETGTEAAGQRQA---ATDEFMLERFRKRER
            +P++ + +Y    R Y E+L    R + E  K R L+  G   KP    +    +R A   ATD++  E+F+K  R
Subjt:  SEFSIPSSYSADYFHRGRDYAEKLR---REHPELYKDRSLQDDGSGSKPAETGTEAAGQRQA---ATDEFMLERFRKRER

Q5RC87 Telomere length and silencing protein 1 homolog2.6e-1235.71Show/hide
Query:  EDPNMLKYIEQELAKKRGRTVETVEGAENDL--KQAEDELYKIPEHLKVKRRNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGR
        ED +M+KYIE EL K++G     VE  E  +  K AED LY++PE+++V      E   S Q  +GI EV   I+ K+KNI  TE AK +LL E++   +
Subjt:  EDPNMLKYIEQELAKKRGRTVETVEGAENDL--KQAEDELYKIPEHLKVKRRNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGR

Query:  STSEFSIPSSYSADYFHRGRDYAEKLR---REHPELYKDRSLQDDGSGSKPAETGTEAAGQRQA---ATDEFMLERFRKRER
         +    +P++ + +Y    R Y E+L    R + E  K R L+  G   KP    +    +R A   ATD++  E+F+K  R
Subjt:  STSEFSIPSSYSADYFHRGRDYAEKLR---REHPELYKDRSLQDDGSGSKPAETGTEAAGQRQA---ATDEFMLERFRKRER

Q9NZ63 Telomere length and silencing protein 1 homolog5.3e-1336.26Show/hide
Query:  EDPNMLKYIEQELAKKRGRTVETVEGAENDL--KQAEDELYKIPEHLKVKRRNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGR
        ED +M+KYIE EL K++G     VE  E  +  K AED LY++PE+++V      E   S Q  +GI EV L I+ K+KNI  TE AK +LL E++   +
Subjt:  EDPNMLKYIEQELAKKRGRTVETVEGAENDL--KQAEDELYKIPEHLKVKRRNSNES--STQWTTGIAEVQLPIEFKLKNIEETEAAK-KLLQEKRFVGR

Query:  STSEFSIPSSYSADYFHRGRDYAEKLR---REHPELYKDRSLQDDGSGSKPAETGTEAAGQRQA---ATDEFMLERFRKRER
         +    +P++ + +Y    R Y E+L    R + E  K R L+  G   KP    +    +R A   ATD++  E+F+K  R
Subjt:  STSEFSIPSSYSADYFHRGRDYAEKLR---REHPELYKDRSLQDDGSGSKPAETGTEAAGQRQA---ATDEFMLERFRKRER

Arabidopsis top hitse value%identityAlignment
AT1G02330.1 CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink).9.1e-6972.97Show/hide
Query:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS
        ++EDPNM+KYIEQELAKKRGR ++  E  EN+LK+ EDELYKIP+HLKVK+R+S ESSTQWTTGIAEVQLPIE+KLKNIEETEAAKKLLQE+R +GR  S
Subjt:  MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTS

Query:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDR-SLQDDGSGSKPAETGT-----EAAGQRQAATDEFMLERFRKRERHRVMRR
        EFSIPSSYSADYF RG+DYAEKLRREHPELYKDR   Q DG  +KP+ + +     ++   RQAATD+ MLERFRKRER+RVMRR
Subjt:  EFSIPSSYSADYFHRGRDYAEKLRREHPELYKDR-SLQDDGSGSKPAETGT-----EAAGQRQAATDEFMLERFRKRERHRVMRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAAGATCCCAATATGTTGAAGTATATCGAACAAGAACTTGCAAAGAAAAGGGGAAGAACTGTTGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGA
AGATGAATTATACAAAATCCCAGAGCATCTTAAAGTTAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAAT
TCAAGTTGAAGAACATTGAGGAAACTGAGGCTGCTAAAAAGCTTCTACAGGAAAAGAGATTTGTGGGTCGTTCGACGTCAGAGTTCAGCATCCCCTCAAGTTATAGTGCT
GATTATTTTCACCGTGGCAGGGATTATGCTGAAAAACTCAGAAGAGAACATCCTGAGCTATACAAGGATAGAAGTTTGCAAGATGATGGTTCTGGCTCCAAACCAGCAGA
GACTGGTACAGAGGCTGCTGGGCAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGCGAACGTCATCGGGTTATGCGGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAAGATCCCAATATGTTGAAGTATATCGAACAAGAACTTGCAAAGAAAAGGGGAAGAACTGTTGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGA
AGATGAATTATACAAAATCCCAGAGCATCTTAAAGTTAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAAT
TCAAGTTGAAGAACATTGAGGAAACTGAGGCTGCTAAAAAGCTTCTACAGGAAAAGAGATTTGTGGGTCGTTCGACGTCAGAGTTCAGCATCCCCTCAAGTTATAGTGCT
GATTATTTTCACCGTGGCAGGGATTATGCTGAAAAACTCAGAAGAGAACATCCTGAGCTATACAAGGATAGAAGTTTGCAAGATGATGGTTCTGGCTCCAAACCAGCAGA
GACTGGTACAGAGGCTGCTGGGCAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGCGAACGTCATCGGGTTATGCGGAGATAA
Protein sequenceShow/hide protein sequence
MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTSEFSIPSSYSA
DYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR