; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G4236 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4236
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionBED-type domain-containing protein
Genome locationctg109:130338..131035
RNA-Seq ExpressionCucsat.G4236
SyntenyCucsat.G4236
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050353.1 hypothetical protein E6C27_scaffold88G00840 [Cucumis melo var. makuwa]5.49e-11797.16Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAAGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL++QDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFA+RILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL

KAA0062061.1 hypothetical protein E6C27_scaffold89G004030 [Cucumis melo var. makuwa]1.09e-11697.73Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAAGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL+VQDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFA+RILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL

XP_011660188.2 uncharacterized protein LOC105436349 [Cucumis sativus]2.28e-11896Show/hide
Query:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA
        MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPN QEDDEIVNGLYSCITKMVASLEVQDKIL ELSKYKRA
Subjt:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA

Query:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
        +ALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLT SASGC RNWSV EQLHSKK+NRLAQSRLNDL
Subjt:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL

XP_031737060.1 uncharacterized protein LOC101204843 [Cucumis sativus]8.62e-11999.43Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLN SFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL

XP_031739008.1 uncharacterized protein LOC116402801 [Cucumis sativus]1.94e-11899.43Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLN SFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL

TrEMBL top hitse value%identityAlignment
A0A5A7TY62 BED-type domain-containing protein7.42e-11797.16Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAAGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL++QDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFA+RILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL

A0A5A7U370 Uncharacterized protein2.66e-11797.16Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAAGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL++QDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFA+RILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL

A0A5A7UJ75 Dimer_Tnp_hAT domain-containing protein9.69e-11794.32Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIY+AMDRAKEAIAKSFNNNE KYKDIFTIID+RWELQLHRPLHAAGYYLNPSFYYSNP+IQEDDEIVNGLY CITKMVASL++QDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
        AEA FGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFA+RILGLTCSAS CERNWSVFEQLHSKKRNRLAQSRLNDL
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL

A0A5A7V8P5 BED-type domain-containing protein5.26e-11797.73Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAAGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL+VQDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFA+RILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL

A0A5A7VJR4 BED-type domain-containing protein7.42e-11797.16Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAAGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL++QDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFA+RILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G22220.1 hAT transposon superfamily7.6e-3645.51Show/hide
Query:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQED--DEIVNGLYSCITKMVASLEVQDKILAELSKYK
        MGY+Y AM RAKEAI  +  + EE Y   + IID+ W   L +PL+AAG+YLNP F+YS   I E+   EI   +  CI K+V  + +QD ++ +++ YK
Subjt:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQED--DEIVNGLYSCITKMVASLEVQDKILAELSKYK

Query:  RAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQLHSKKRNRLAQSRLNDL
         A  +FG+ LAIR RD + P EWW  +G+S  NL +FA+RIL  TCS+S G  RN +   Q++  K N + + RLNDL
Subjt:  RAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQLHSKKRNRLAQSRLNDL

AT3G22220.2 hAT transposon superfamily7.6e-3645.51Show/hide
Query:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQED--DEIVNGLYSCITKMVASLEVQDKILAELSKYK
        MGY+Y AM RAKEAI  +  + EE Y   + IID+ W   L +PL+AAG+YLNP F+YS   I E+   EI   +  CI K+V  + +QD ++ +++ YK
Subjt:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQED--DEIVNGLYSCITKMVASLEVQDKILAELSKYK

Query:  RAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQLHSKKRNRLAQSRLNDL
         A  +FG+ LAIR RD + P EWW  +G+S  NL +FA+RIL  TCS+S G  RN +   Q++  K N + + RLNDL
Subjt:  RAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQLHSKKRNRLAQSRLNDL

AT4G15020.1 hAT transposon superfamily1.8e-3746.02Show/hide
Query:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA
        MGY+Y A+ RAK+AI K+   N E Y   + IID+ WE Q H PL AAG++LNP  +Y N N +   E++  +  CI ++V   ++QDKI+ EL+ YK A
Subjt:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA

Query:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQLHSKKRNRLAQSRLNDL
          +FG+ LAIR RD + P EWW  +G+S  NL +FA+RIL  TCS+S  C RN    E ++  K N + Q RL+DL
Subjt:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQLHSKKRNRLAQSRLNDL

AT4G15020.2 hAT transposon superfamily1.8e-3746.02Show/hide
Query:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA
        MGY+Y A+ RAK+AI K+   N E Y   + IID+ WE Q H PL AAG++LNP  +Y N N +   E++  +  CI ++V   ++QDKI+ EL+ YK A
Subjt:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA

Query:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQLHSKKRNRLAQSRLNDL
          +FG+ LAIR RD + P EWW  +G+S  NL +FA+RIL  TCS+S  C RN    E ++  K N + Q RL+DL
Subjt:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQLHSKKRNRLAQSRLNDL

AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related6.6e-6460.23Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIY AMD+AKE I KSF   EE YK  F IID+RW++QLHRPLHAAGYYLNP F+Y  P+    +E++ G   C+ ++V  +E QDKI+ EL  +K+
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL
        A  LFG P+AIR R K+SP EWW  +G STPNLQ FA+++L LTCSA+GCERNW VF+ LH+K+RNRL Q RLND+
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTATGGGATATATTTATGAGGCCATGGATAGAGCTAAGGAAGCTATTGCTAAATCCTTTAATAATAATGAAGAAAAATACAAGGACATTTTCACCATAATTGATAAAAG
ATGGGAGCTTCAGTTGCATCGTCCTCTGCATGCAGCGGGGTATTATTTAAACCCGTCATTCTATTATTCGAATCCTAACATCCAGGAGGATGATGAAATAGTTAATGGAC
TCTACTCATGCATAACGAAAATGGTTGCTTCATTGGAAGTACAAGACAAAATACTTGCAGAACTAAGCAAGTATAAGAGGGCTGAAGCATTATTCGGACAACCTTTAGCA
ATCAGACAAAGGGACAAAATATCTCCAGTGGAATGGTGGGATAATTTTGGACAATCAACTCCAAACTTGCAAAAGTTTGCTGTGAGAATTTTAGGTCTTACTTGTAGTGC
TTCTGGATGCGAGCGTAATTGGAGTGTGTTTGAACAGCTTCATAGCAAGAAACGAAATAGGCTTGCTCAAAGTCGTTTGAATGATCTA
mRNA sequenceShow/hide mRNA sequence
CCTATGGGATATATTTATGAGGCCATGGATAGAGCTAAGGAAGCTATTGCTAAATCCTTTAATAATAATGAAGAAAAATACAAGGACATTTTCACCATAATTGATAAAAG
ATGGGAGCTTCAGTTGCATCGTCCTCTGCATGCAGCGGGGTATTATTTAAACCCGTCATTCTATTATTCGAATCCTAACATCCAGGAGGATGATGAAATAGTTAATGGAC
TCTACTCATGCATAACGAAAATGGTTGCTTCATTGGAAGTACAAGACAAAATACTTGCAGAACTAAGCAAGTATAAGAGGGCTGAAGCATTATTCGGACAACCTTTAGCA
ATCAGACAAAGGGACAAAATATCTCCAGTGGAATGGTGGGATAATTTTGGACAATCAACTCCAAACTTGCAAAAGTTTGCTGTGAGAATTTTAGGTCTTACTTGTAGTGC
TTCTGGATGCGAGCGTAATTGGAGTGTGTTTGAACAGCTTCATAGCAAGAAACGAAATAGGCTTGCTCAAAGTCGTTTGAATGATCTA
Protein sequenceShow/hide protein sequence
PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRAEALFGQPLA
IRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQLHSKKRNRLAQSRLNDL