CuGenDBv2

Gene ID	Cucsat.G4339
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Transcription and mRNA export factor ENY2
Genome location	ctg1170:854216..856658
RNA-Seq Expression	Cucsat.G4339
Synteny	Cucsat.G4339
Gene Ontology terms	GO:0006325 - chromatin organization (biological process) GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process) GO:0015031 - protein transport (biological process) GO:0016578 - histone deubiquitination (biological process) GO:0016973 - poly(A)+ mRNA export from nucleus (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0000124 - SAGA complex (cellular component) GO:0005643 - nuclear pore (cellular component) GO:0070390 - transcription export complex 2 (cellular component) GO:0071819 - DUBm complex (cellular component) GO:0003682 - chromatin binding (molecular function) GO:0003713 - transcription coactivator activity (molecular function)
InterPro domains	IPR018783 - Transcription factor, enhancer of yellow 2 IPR038212 - Transcription factor EnY2 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008445505.1 PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo]

1.01e-31

96.67

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS
        +LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR S
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS

XP_011657386.1 transcription and mRNA export factor ENY2 [Cucumis sativus]

1.01e-31

96.67

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS
        +LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR S
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS

XP_016899913.1 PREDICTED: transcription and mRNA export factor SUS1 isoform X1 [Cucumis melo]

8.54e-32

98.31

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRG
        +LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRG
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRG

XP_022951096.1 transcription and mRNA export factor SUS1 [Cucurbita moschata]

1.01e-31

96.67

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS
        +LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR S
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS

XP_038884208.1 transcription and mRNA export factor ENY2 [Benincasa hispida]

1.01e-31

96.67

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS
        +LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR S
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KIM7 Transcription and mRNA export factor ENY2

4.90e-32

96.67

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS
        +LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR S
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS

A0A1S4DVB5 Transcription and mRNA export factor ENY2

4.13e-32

98.31

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRG
        +LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRG
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRG

A0A6J1BSW0 Transcription and mRNA export factor ENY2

4.90e-32

96.67

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS
        +LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR S
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS

A0A6J1GGQ4 Transcription and mRNA export factor ENY2

4.90e-32

96.67

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS
        +LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR S
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS

A0A6J1KQ41 Transcription and mRNA export factor ENY2

4.90e-32

96.67

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS
        +LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR S
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGS

SwissProt top hits

e value

%identity

Alignment

Q3ZBJ0 Transcription and mRNA export factor ENY2

6.0e-16

65.52

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR
        +LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGR
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR

Q6DH42 Transcription and mRNA export factor ENY2

6.0e-16

63.79

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR
        +LIE GE+ERLKELLR +LIECGW+D++KALC+  +++KG  NV+V+DLV  +TPKGR
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR

Q6NQ54 Transcription and mRNA export factor ENY2

1.7e-18

63.08

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI
        +L+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGR S   S+
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI

Q9JIX0 Transcription and mRNA export factor ENY2

6.0e-16

65.52

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR
        +LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGR
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR

Q9NPA8 Transcription and mRNA export factor ENY2

6.0e-16

65.52

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR
        +LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGR
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR

Arabidopsis top hits

e value

%identity

Alignment

AT3G27100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

1.2e-19

63.08

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI
        +L+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGR S   S+
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI

AT3G27100.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

9.2e-20

67.8

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Query:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRG
        +L+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRG
Subjt:  QLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRG

Sequences

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CDS sequence

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ATGATTTTGATTGGATTTCTTCCTGGACAGCTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGAT
GAAAGCACTTTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTCAGTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGGTTCGTTCTCACTTTCCA
TTTTAGAAGTGGTTGCTATTGGTTGCACTTATCATAAACTTCTGATACGTTATCATTTGACTGCTTTTGCTGCTGAAAGGATCCTTGATATGCTACACCCTCTAACAATT
GTTACATATGATGCAAGAAAACTTCACGTTTATGTATCCTAG

mRNA sequence

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Protein sequence

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MILIGFLPGQLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSILEVVAIGCTYHKLLIRYHLTAFAAERILDMLHPLTI
VTYDARKLHVYVS

Cucsat.G4339 (gene) of Cucumber (B10) v3 genome