; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G4350 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4350
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionBED-type domain-containing protein
Genome locationctg1173:64634..65216
RNA-Seq ExpressionCucsat.G4350
SyntenyCucsat.G4350
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR007021 - Domain of unknown function DUF659
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031736734.1 uncharacterized protein LOC116402076 [Cucumis sativus]9.24e-111100Show/hide
Query:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
        YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
Subjt:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF

Query:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
        LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
Subjt:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK

XP_031736957.1 uncharacterized protein LOC116402111 isoform X1 [Cucumis sativus]1.20e-11098.77Show/hide
Query:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
        YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
Subjt:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF

Query:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
        LVNSPKGTMFIESIDASFYVKDGKKMFELL+NFVDQIGEANVVQVVTDSASANVM GRLLEAK
Subjt:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK

XP_031741274.1 uncharacterized protein LOC116403810 [Cucumis sativus]9.74e-112100Show/hide
Query:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
        YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
Subjt:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF

Query:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
        LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
Subjt:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK

XP_031741477.1 uncharacterized protein LOC105435633 [Cucumis sativus]7.63e-108100Show/hide
Query:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
        YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
Subjt:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF

Query:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
        LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
Subjt:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK

XP_031742231.1 uncharacterized protein LOC116404127 [Cucumis sativus]1.50e-11097.55Show/hide
Query:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
        YKKEMREHTIQRIARWFYDAGVPLNACTYES APMIESIGQFGPGLKPPSYHELRVPCLKKELE+TNELMSNHKVEWAKVGCTVM DGWTDRRNRTLINF
Subjt:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF

Query:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
        LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFV+QIGEANVVQVVTDSASANVMAGRLLEAK
Subjt:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK

TrEMBL top hitse value%identityAlignment
A0A1S3CC76 uncharacterized protein LOC1034991763.01e-10793.25Show/hide
Query:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
        YKKEMREHTIQRIARWFYDAGVPLNACTY+ FAP+IESIGQFGPGLKPP+YHELRVPCLKKELEATNELMS+HK EWAKVGCT+M DGWTDRRNRTLINF
Subjt:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF

Query:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
        LVNSPKGTMFIESIDAS YVKDGKKMFELLDNFV++IGEANVVQVVTDSASANVMAGRLLEAK
Subjt:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK

A0A5A7TWK3 BED-type domain-containing protein2.24e-10495.71Show/hide
Query:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
        YKKEMREHTIQRIARWFYDAGVPLNACTY+SFAPMIESIGQFGPGLKPP+YHELRVPCLKKELEATNELMS+HK EWAKVGCTVMADGWTDRRNRTLINF
Subjt:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF

Query:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
        LVNSPKGTMFIESIDAS YVKDGKKMFELLDNFV++IGEANVVQVVTDSASANVMAGRLLEAK
Subjt:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK

A0A5A7TY62 BED-type domain-containing protein1.59e-10395.71Show/hide
Query:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
        YKKEMREHTIQRIARWFYDAGVPLNACTY+SFAPMIESIGQFGPGLKPP+YHELRVPCLKKELEATNELMS+HK EWAKVGCTVMADGWTDRRNRTLINF
Subjt:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF

Query:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
        LVNSPKGTMFIESIDAS YVKDGKKMFELLDNFV++IGEANVVQVVTDSASANVMAGRLLEAK
Subjt:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK

A0A5D3BV42 BED-type domain-containing protein1.23e-10495.71Show/hide
Query:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
        YKKEMREHTIQRIARWFYDAGVPLNACTY+SFAPMIESIGQFGPGLKPP+YHELRVPCLKKELEATNELMS+HK EWAKVGCTVMADGWTDRRNRTLINF
Subjt:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF

Query:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
        LVNSPKGTMFIESIDAS YVKDGKKMFELLDNFV++IGEANVVQVVTDSASANVMAGRLLEAK
Subjt:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK

A0A5D3DR78 BED-type domain-containing protein9.60e-10495.71Show/hide
Query:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF
        YKKEMREHTIQRIARWFYDAGVPLNACTY+SFAPMIESIGQFGPGLKPP+YHELRVPCLKKELEATNELMS+HK EWAKVGCTVMADGWTDRRNRTLINF
Subjt:  YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINF

Query:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
        LVNSPKGTMFIESIDAS YVKDGKKMFELLDNFV++IGEANVVQVVTDSASANVMAGRLLEAK
Subjt:  LVNSPKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43260.1 hAT transposon superfamily protein4.4e-3039.24Show/hide
Query:  REHTI-QRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINFLVNS
        R H + Q +ARW Y  G+P NA   +    M+E  GQFGPG+ PPS ++LR P LK+E+     LM   + EW   GC+V  D W+DR+ R+++N  +N 
Subjt:  REHTI-QRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINFLVNS

Query:  PKGTMFIESIDASFYVKDGKKMFELLDNF-VDQIGEANVVQVVTDSASANVMAGRLLE
         +GTMF+ S D       G+ +F  ++ + +  +G  +VVQVVT++A+ N+ A +LL+
Subjt:  PKGTMFIESIDASFYVKDGKKMFELLDNF-VDQIGEANVVQVVTDSASANVMAGRLLE

AT1G79740.1 hAT transposon superfamily1.2e-1930.43Show/hide
Query:  IARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMFIE
        I+ +F++  +        S+  M++++ + GPG   PS     +  +K ++      + + + EW   GCT++A+ WTD ++R LINF V+SP    F +
Subjt:  IARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMFIE

Query:  SIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSA
        S+DAS Y K+ K + +L D+ +  IG+ ++VQ++ D++
Subjt:  SIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSA

AT3G17450.1 hAT dimerisation domain-containing protein2.7e-2737.34Show/hide
Query:  REHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINFLVNSP
        R+     I+++ +  GVP  A     F  MIE IG +G G   PS        L++E+      +  ++  W   GC++MAD WT+   + +I+FLV+ P
Subjt:  REHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINFLVNSP

Query:  KGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK
        +G  F  SIDA+  V+D   +F+ LD  VD IGE NVVQV+T + +    AG+LLE K
Subjt:  KGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK

AT4G15020.1 hAT transposon superfamily4.9e-2133.33Show/hide
Query:  REHTI-QRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINFLVNS
        RE+TI   I R+ +  G   +A    +F PMI++I   G G+  P++ +LR   LK  +E   + +   K  W + GC+++ +     +   ++NFLV  
Subjt:  REHTI-QRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINFLVNS

Query:  PKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLL
        P+  +F++S+DAS  +    K+FELL   V+++G  NVVQV+T      V AG+ L
Subjt:  PKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLL

AT4G15020.2 hAT transposon superfamily4.9e-2133.33Show/hide
Query:  REHTI-QRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINFLVNS
        RE+TI   I R+ +  G   +A    +F PMI++I   G G+  P++ +LR   LK  +E   + +   K  W + GC+++ +     +   ++NFLV  
Subjt:  REHTI-QRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINFLVNS

Query:  PKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLL
        P+  +F++S+DAS  +    K+FELL   V+++G  NVVQV+T      V AG+ L
Subjt:  PKGTMFIESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGCTCGATGGTTTTATGATGCAGGAGTGCCTCTGAATGCTTGCACATACGAAAGTTTTGCCCCTATGATTGA
GTCAATTGGGCAATTCGGTCCTGGATTGAAACCACCATCTTATCATGAGTTAAGAGTTCCATGTTTGAAGAAGGAATTAGAAGCAACAAATGAGTTGATGAGTAACCATA
AGGTAGAGTGGGCCAAGGTTGGATGCACTGTTATGGCTGATGGATGGACCGATAGAAGAAATAGGACATTAATTAACTTTTTAGTTAATAGTCCTAAAGGCACCATGTTT
ATTGAGTCCATCGATGCTTCATTTTATGTGAAAGATGGAAAGAAGATGTTCGAGTTACTTGATAATTTTGTAGACCAAATTGGAGAAGCGAATGTTGTACAAGTAGTTAC
CGATAGTGCCTCAGCAAATGTGATGGCAGGGAGATTGTTAGAAGCAAAA
mRNA sequenceShow/hide mRNA sequence
TACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGCTCGATGGTTTTATGATGCAGGAGTGCCTCTGAATGCTTGCACATACGAAAGTTTTGCCCCTATGATTGA
GTCAATTGGGCAATTCGGTCCTGGATTGAAACCACCATCTTATCATGAGTTAAGAGTTCCATGTTTGAAGAAGGAATTAGAAGCAACAAATGAGTTGATGAGTAACCATA
AGGTAGAGTGGGCCAAGGTTGGATGCACTGTTATGGCTGATGGATGGACCGATAGAAGAAATAGGACATTAATTAACTTTTTAGTTAATAGTCCTAAAGGCACCATGTTT
ATTGAGTCCATCGATGCTTCATTTTATGTGAAAGATGGAAAGAAGATGTTCGAGTTACTTGATAATTTTGTAGACCAAATTGGAGAAGCGAATGTTGTACAAGTAGTTAC
CGATAGTGCCTCAGCAAATGTGATGGCAGGGAGATTGTTAGAAGCAAAA
Protein sequenceShow/hide protein sequence
YKKEMREHTIQRIARWFYDAGVPLNACTYESFAPMIESIGQFGPGLKPPSYHELRVPCLKKELEATNELMSNHKVEWAKVGCTVMADGWTDRRNRTLINFLVNSPKGTMF
IESIDASFYVKDGKKMFELLDNFVDQIGEANVVQVVTDSASANVMAGRLLEAK