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Cucsat.G4362 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4362
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationctg1173:637417..638625
RNA-Seq ExpressionCucsat.G4362
SyntenyCucsat.G4362
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036615.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.39e-1346.88Show/hide
Query:  ALLDLPSAPCEGHEFAPVRQSTR------------------------------------QAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
        AL DLPS PCE  E APVR+STR                                    QAMD+ELQAL KT TWDYV+LP  KKPI CKWI K K
Subjt:  ALLDLPSAPCEGHEFAPVRQSTR------------------------------------QAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
KAA0045235.1 syntaxin-42 isoform X2 [Cucumis melo var. makuwa]1.07e-1259.68Show/hide
Query:  HEFAPVRQSTRQAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSKRTMMTLLNDTKHDL
        +E A      +QAM+ + +ALEKT TWDYV+LP  KKPI CKWI K+K T++ LLNDTKHDL
Subjt:  HEFAPVRQSTRQAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSKRTMMTLLNDTKHDL
KAA0052023.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.16e-1346.88Show/hide
Query:  ALLDLPSAPCEGHEFAPVRQSTR------------------------------------QAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
        AL DLPS PCE  E APVR+STR                                    QAMD+ELQAL KT TWDYV+LP  KKPI CKWI K K
Subjt:  ALLDLPSAPCEGHEFAPVRQSTR------------------------------------QAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
KAA0058859.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.57e-1674.55Show/hide
Query:  ALLDLPSAPCEGHEFAPVRQSTRQAMDEELQALEKTRTWDYVNLPREKKPITCKW
        ALLDLPS PCE  E   VRQSTRQAM+EELQALEKT TWDYV+LP  KKPI  K+
Subjt:  ALLDLPSAPCEGHEFAPVRQSTRQAMDEELQALEKTRTWDYVNLPREKKPITCKW
TYK03354.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.36e-1346.88Show/hide
Query:  ALLDLPSAPCEGHEFAPVRQSTR------------------------------------QAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
        AL DLPS PCE  E APVR+STR                                    QAMD+ELQAL KT TWDYV+LP  KKPI CKWI K K
Subjt:  ALLDLPSAPCEGHEFAPVRQSTR------------------------------------QAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
TrEMBL top hitse value%identityAlignment
A0A5A7T587 Retrovirus-related Pol polyprotein from transposon TNT 1-942.61e-1346.88Show/hide
Query:  ALLDLPSAPCEGHEFAPVRQSTR------------------------------------QAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
        AL DLPS PCE  E APVR+STR                                    QAMD+ELQAL KT TWDYV+LP  KKPI CKWI K K
Subjt:  ALLDLPSAPCEGHEFAPVRQSTR------------------------------------QAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
A0A5A7TV31 Syntaxin-42 isoform X25.18e-1359.68Show/hide
Query:  HEFAPVRQSTRQAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSKRTMMTLLNDTKHDL
        +E A      +QAM+ + +ALEKT TWDYV+LP  KKPI CKWI K+K T++ LLNDTKHDL
Subjt:  HEFAPVRQSTRQAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSKRTMMTLLNDTKHDL
A0A5A7UZB1 Putative mitochondrial protein2.70e-1674.55Show/hide
Query:  ALLDLPSAPCEGHEFAPVRQSTRQAMDEELQALEKTRTWDYVNLPREKKPITCKW
        ALLDLPS PCE  E   VRQSTRQAM+EELQALEKT TWDYV+LP  KKPI  K+
Subjt:  ALLDLPSAPCEGHEFAPVRQSTRQAMDEELQALEKTRTWDYVNLPREKKPITCKW
A0A5D3BW47 Retrovirus-related Pol polyprotein from transposon TNT 1-942.60e-1346.88Show/hide
Query:  ALLDLPSAPCEGHEFAPVRQSTR------------------------------------QAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
        AL DLPS PCE  E APVR+STR                                    QAMD+ELQAL KT TWDYV+LP  KKPI CKWI K K
Subjt:  ALLDLPSAPCEGHEFAPVRQSTR------------------------------------QAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
A0A5D3BYD8 Putative mitochondrial protein2.50e-1346.88Show/hide
Query:  ALLDLPSAPCEGHEFAPVRQSTR------------------------------------QAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
        AL DLPS PCE  E APVR+STR                                    QAMD+ELQAL KT TWDYV+LP  KKPI CKWI K K
Subjt:  ALLDLPSAPCEGHEFAPVRQSTR------------------------------------QAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-0440Show/hide
Query:  PVRQSTRQAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSKR
        P +    +AM EE+++L+K  T+  V LP+ K+P+ CKW+ K K+
Subjt:  PVRQSTRQAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSKR
Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.7e-0655.56Show/hide
Query:  AMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK
        AMD+E+ A+E T TW+   LP  KKPI CKW+ K K
Subjt:  AMDEELQALEKTRTWDYVNLPREKKPITCKWILKSK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGCTCTTGGATCTTCCATCTGCCCCTTGTGAAGGGCATGAATTTGCACCTGTTCGACAATCCACCCGGCAAGCAATGGATGAAGAGCTTCAAGCCTTAGAAAAGACTCG
TACTTGGGACTATGTTAATTTACCTCGTGAAAAGAAACCTATCACCTGCAAGTGGATTTTAAAATCAAAACGCACTATGATGACTTTATTGAACGATACAAAGCACGACT
TGTGGCCAAAGGTTATTCTCATAAATATGACATTGATTATGAAGAAACATAGAGTAGCTCGAATGATGTATTTGTTCGCAGTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
GCGCTCTTGGATCTTCCATCTGCCCCTTGTGAAGGGCATGAATTTGCACCTGTTCGACAATCCACCCGGCAAGCAATGGATGAAGAGCTTCAAGCCTTAGAAAAGACTCG
TACTTGGGACTATGTTAATTTACCTCGTGAAAAGAAACCTATCACCTGCAAGTGGATTTTAAAATCAAAACGCACTATGATGACTTTATTGAACGATACAAAGCACGACT
TGTGGCCAAAGGTTATTCTCATAAATATGACATTGATTATGAAGAAACATAGAGTAGCTCGAATGATGTATTTGTTCGCAGTCTTTTAG
Protein sequenceShow/hide protein sequence
ALLDLPSAPCEGHEFAPVRQSTRQAMDEELQALEKTRTWDYVNLPREKKPITCKWILKSKRTMMTLLNDTKHDLWPKVILINMTLIMKKHRVARMMYLFAVF