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Cucsat.G4379 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4379
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionChlororespiratory reduction 3, putative isoform 1
Genome locationctg1173:1372843..1375137
RNA-Seq ExpressionCucsat.G4379
SyntenyCucsat.G4379
Gene Ontology termsGO:0009773 - photosynthetic electron transport in photosystem I (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR038931 - Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142275.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucumis sativus]1.46e-113100Show/hide
Query:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
        MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
        PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
XP_008464703.1 PREDICTED: probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic isoform X1 [Cucumis melo]9.95e-9990.42Show/hide
Query:  MASLFSISFTKNVAFASLNPD--PHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKY
        MASLFSIS TKNVA ASLNP+   HSHSHSPPLKTN AA TIPI  PRLR KLLNP RPS+IEIERAIGGGRFRDADPR+LEEDKKAAFDMFLMSFTGKY
Subjt:  MASLFSISFTKNVAFASLNPD--PHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKY

Query:  EAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
        E PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPF+TPFLNELLM
Subjt:  EAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
XP_022942899.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita moschata]8.46e-8381.1Show/hide
Query:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
        MA    IS TKNVA ASLNP     SHSPP KTN AA TIPI NPRLRR+L  P RPS+IEIERAIG GRFRDADPR+LEED+KAAFDMFLMSFTGKYE 
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL
         LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPF+TPFL++LL
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL
XP_023511915.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita pepo subsp. pepo]3.60e-8481.71Show/hide
Query:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
        MA  F IS TKNVA ASLNP     SHSPP KTN AA TIPI NPRLRR+L  P RPS+IEIERAIG GRFRDADPR+LEED+KAAFDMFLMSFTGKYE 
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL
         LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPF+TPFL++LL
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL
XP_038893324.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Benincasa hispida]7.42e-9386.06Show/hide
Query:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
        MAS FSIS TKNV  ASLNP     SHSPP KTN AA TIPINNPRLRR+L  P RPS+IEIERAIGGGRFRDADPR+LEED+KAAFDMFLMSFTGKYE 
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
        P+MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASG+IKLPF+TPFLNELLM
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
TrEMBL top hitse value%identityAlignment
A0A0A0KJA3 Uncharacterized protein7.08e-114100Show/hide
Query:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
        MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
        PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
A0A1S3CM65 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic isoform X14.82e-9990.42Show/hide
Query:  MASLFSISFTKNVAFASLNPD--PHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKY
        MASLFSIS TKNVA ASLNP+   HSHSHSPPLKTN AA TIPI  PRLR KLLNP RPS+IEIERAIGGGRFRDADPR+LEEDKKAAFDMFLMSFTGKY
Subjt:  MASLFSISFTKNVAFASLNPD--PHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKY

Query:  EAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
        E PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPF+TPFLNELLM
Subjt:  EAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
A0A6J1DQ49 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic1.38e-7778.18Show/hide
Query:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
        +AS   IS TKNVA ASLN    SHS SP  K N  A TIPI N   RR L  P RPS+IEIERAIG GRFRDADPR+LEED+K  FDMFL+SFT KYE 
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
        PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQW+LPIWALSLLVASGVIKLPFSTPFL+ELLM
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
A0A6J1FSN9 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic4.10e-8381.1Show/hide
Query:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
        MA    IS TKNVA ASLNP     SHSPP KTN AA TIPI NPRLRR+L  P RPS+IEIERAIG GRFRDADPR+LEED+KAAFDMFLMSFTGKYE 
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL
         LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPF+TPFL++LL
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL
A0A6J1J6W0 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic1.84e-8279.64Show/hide
Query:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRK---LLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGK
        MA  F IS TKNVA ASLNP     SHSPP KTN AA TIP+NNP+LRR+   L  P RPS+IEIERAIG GRFRDADPR+LEED+KAAFDMFLMSFTGK
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRK---LLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGK

Query:  YEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL
        YE  LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPF+TPFL++LL
Subjt:  YEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL
SwissProt top hitse value%identityAlignment
Q9ZVE7 Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic9.5e-2541.48Show/hide
Query:  MASLFSISFTKNVAFASL-NPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNP----------PRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDM
        +++++SI+       ASL N  P     S P K  L + T P   P   R++              +PS+ +IERA G G +RD+   E E D    FD 
Subjt:  MASLFSISFTKNVAFASL-NPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNP----------PRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDM

Query:  FLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
         L+    K+E+ + KKLRE GE    +TE K ++SGK  L+FT QW+LPIW +SLLVA GVIKLPFS PFL++L+M
Subjt:  FLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
Arabidopsis top hitse value%identityAlignment
AT2G01590.1 chlororespiratory reduction 36.7e-2641.48Show/hide
Query:  MASLFSISFTKNVAFASL-NPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNP----------PRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDM
        +++++SI+       ASL N  P     S P K  L + T P   P   R++              +PS+ +IERA G G +RD+   E E D    FD 
Subjt:  MASLFSISFTKNVAFASL-NPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNP----------PRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDM

Query:  FLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
         L+    K+E+ + KKLRE GE    +TE K ++SGK  L+FT QW+LPIW +SLLVA GVIKLPFS PFL++L+M
Subjt:  FLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTCTTCTCCATTTCGTTTACCAAAAATGTGGCTTTCGCTTCACTCAATCCCGACCCCCACTCTCACTCTCACTCTCCTCCTCTCAAAACCAATCTCGCCGC
CCACACCATTCCGATCAACAATCCCCGCCTACGGCGCAAGCTTCTAAACCCTCCTCGCCCCTCCCTCATTGAAATCGAACGTGCTATTGGTGGTGGAAGGTTCAGAGACG
CCGACCCTAGGGAATTGGAAGAAGATAAGAAGGCTGCATTTGACATGTTTTTGATGAGTTTTACGGGGAAATATGAAGCGCCACTCATGAAAAAGCTTCGTGAGACAGGG
GAATGGGTAACTAATCAAACTGAAACCAAATTTCAAGCTTCGGGAAAATGGTTTCTGTTGTTTACATTTCAATGGGTTCTTCCAATTTGGGCATTGTCACTTCTCGTGGC
TTCTGGGGTCATTAAGCTACCATTCAGCACTCCATTTCTTAATGAACTTCTCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCTCTTCTCCATTTCGTTTACCAAAAATGTGGCTTTCGCTTCACTCAATCCCGACCCCCACTCTCACTCTCACTCTCCTCCTCTCAAAACCAATCTCGCCGC
CCACACCATTCCGATCAACAATCCCCGCCTACGGCGCAAGCTTCTAAACCCTCCTCGCCCCTCCCTCATTGAAATCGAACGTGCTATTGGTGGTGGAAGGTTCAGAGACG
CCGACCCTAGGGAATTGGAAGAAGATAAGAAGGCTGCATTTGACATGTTTTTGATGAGTTTTACGGGGAAATATGAAGCGCCACTCATGAAAAAGCTTCGTGAGACAGGG
GAATGGGTAACTAATCAAACTGAAACCAAATTTCAAGCTTCGGGAAAATGGTTTCTGTTGTTTACATTTCAATGGGTTCTTCCAATTTGGGCATTGTCACTTCTCGTGGC
TTCTGGGGTCATTAAGCTACCATTCAGCACTCCATTTCTTAATGAACTTCTCATGTAA
Protein sequenceShow/hide protein sequence
MASLFSISFTKNVAFASLNPDPHSHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEAPLMKKLRETG
EWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM