CuGenDBv2

Gene ID	Cucsat.G4388
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	binding partner of ACD11 1-like
Genome location	ctg1173:1637835..1640721
RNA-Seq Expression	Cucsat.G4388
Synteny	Cucsat.G4388
Gene Ontology terms	GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR000504 - RNA recognition motif domain IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR035979 - RNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004142266.1 binding partner of ACD11 1 [Cucumis sativus]

3.12e-183

99.64

Show/hide

Query:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP
        +MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP
Subjt:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP

Query:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN
        NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN
Subjt:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN

Query:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

XP_008452423.1 PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]

1.04e-181

98.92

Show/hide

Query:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP
        +MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP
Subjt:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP

Query:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN
        NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMSN
Subjt:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN

Query:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

XP_008452424.1 PREDICTED: binding partner of ACD11 1-like isoform X2 [Cucumis melo]

1.37e-181

99.28

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

XP_022941588.1 binding partner of ACD11 1-like isoform X3 [Cucurbita moschata]

2.50e-173

94.58

Show/hide

Query:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP
        +MRTVKVSNISK TSERDI+EFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTVTG AP
Subjt:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP

Query:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN
        NQAEDVVSTMLAKGFILGKDA+NKAKAFDER QLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQV EKTKSALAVAEQKA+SAGTALMSN
Subjt:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN

Query:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YYV TGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEKKESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

XP_038891484.1 binding partner of ACD11 1 [Benincasa hispida]

1.42e-179

97.47

Show/hide

Query:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP
        +MRTVKVSNISK+TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDK+QTV GIAP
Subjt:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP

Query:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN
        NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMSN
Subjt:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN

Query:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KIR7 RRM domain-containing protein

1.51e-183

99.64

Show/hide

Query:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP
        +MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP
Subjt:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP

Query:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN
        NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN
Subjt:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN

Query:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

A0A1S3BT66 binding partner of ACD11 1-like isoform X2

6.66e-182

99.28

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

A0A1S3BUX7 binding partner of ACD11 1-like isoform X1

5.04e-182

98.92

Show/hide

Query:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP
        +MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP
Subjt:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP

Query:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN
        NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMSN
Subjt:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN

Query:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

A0A5A7UTK1 Binding partner of ACD11 1-like isoform X1

6.66e-182

99.28

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

A0A6J1FSI4 binding partner of ACD11 1-like isoform X3

1.21e-173

94.58

Show/hide

Query:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP
        +MRTVKVSNISK TSERDI+EFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTVTG AP
Subjt:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP

Query:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN
        NQAEDVVSTMLAKGFILGKDA+NKAKAFDER QLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQV EKTKSALAVAEQKA+SAGTALMSN
Subjt:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN

Query:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YYV TGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEKKESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

SwissProt top hits

e value

%identity

Alignment

P87216 Protein vip1

2.0e-06

27.05

Show/hide

Query:  VKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAE
        V V+NIS   +E+ I +FFSF G++  +  ++  E TQ A + ++      TA+LL  A +G   + IT  +         +S  D+       A  Q +
Subjt:  VKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAE

Query:  D----VVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQVREK---TKSALAVAEQKA-
             ++S +L++G+ L    L K+   D+   ++S          +  GI E   +G   VN      EK  E+D  F + +K   T S ++    KA 
Subjt:  D----VVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQVREK---TKSALAVAEQKA-

Query:  -TSAGTA
         T+AGT+
Subjt:  -TSAGTA

Q9LFD5 Binding partner of ACD11 1

1.4e-55

49.23

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        +R+VKV N+S   +E DIKEFFSFSGE+  +++Q    N   AYVT+K++QGA+TA+LL+GA I D SV I L  NY  PP A  +  + + +       
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY
        +AEDVVS+MLAKGFILGKDA+ KAKAFDE+   TS A+A VAS+D+K+G+++K+TAGT++VNEK++ +D+ FQV E+TKS  A AEQ  +SAG+A+M N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDE
        YVLTG +W + A   V +AA EV Q TK   EK E E+     + +  +   ++ +H  E
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDE

Arabidopsis top hits

e value

%identity

Alignment

AT1G67950.1 RNA-binding (RRM/RBD/RNP motifs) family protein

7.1e-71

55.72

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        ++TVK+SN+S + S++D+KEFFSFSG+I YVEM+ E++ +QVAYVT+KDSQGA+TA+LLTGA I DL V+IT   NY LPPEA++  LD   +  G +  
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QVRE TKSALA AE+ A SA TALM+N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPV
        YV +GA+WFSNA  AVTKA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPV

AT1G67950.2 RNA-binding (RRM/RBD/RNP motifs) family protein

7.1e-71

55.72

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        ++TVK+SN+S + S++D+KEFFSFSG+I YVEM+ E++ +QVAYVT+KDSQGA+TA+LLTGA I DL V+IT   NY LPPEA++  LD   +  G +  
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QVRE TKSALA AE+ A SA TALM+N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPV
        YV +GA+WFSNA  AVTKA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPV

AT1G67950.3 RNA-binding (RRM/RBD/RNP motifs) family protein

7.8e-70

55.51

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQ-TVTGIAP
        ++TVK+SN+S + S++D+KEFFSFSG+I YVEM+ E++ +QVAYVT+KDSQGA+TA+LLTGA I DL V+IT   NY LPPEA++  LD ++ +  G + 
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQ-TVTGIAP

Query:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN
         +AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QVRE TKSALA AE+ A SA TALM+N
Subjt:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN

Query:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPV
         YV +GA+WFSNA  AVTKA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPV

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein

1.7e-69

56.06

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Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        M TVKVSN+S   ++RD+KEFFSFSG+ILY+E Q E+E T++AYVT+KD QGA+TA+LL+GA I D SV +++  +Y L PEA++S+  K    +  A +
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  ----QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTAL
            +AEDVVS+MLAKGFILGKDA+ KAK+ DE+ QLTS ASA VAS D+K+G T+KI  GT VV EKVRE+D+ +QV EKTKSA+A AEQ  ++AG+A+
Subjt:  ----QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTAL

Query:  MSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDE
        M N YVLTGA W + A   V KAAEEV Q  K KV  AEEE K         ++  FA +HL E
Subjt:  MSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein

1.5e-68

53.16

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Query:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP
        +M TVKVSN+S   +ERD+KEFFSFSG+I Y+E Q E++ +++AYVT+KD QGA+TA+LLTG+ I D SVT+T+  +Y LPP+A++SI   +++    +P
Subjt:  NMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAP

Query:  --------NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATS
                 +AEDVVS M++KGF+LGKDA+ KAK+ DE+ QLTS ASA V S D+++G TEKI  GT VV+EKV+E+D+ FQV EKTKSA+A AEQ  ++
Subjt:  --------NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATS

Query:  AGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDE
        AG+A+M N YVLTGA W + A   V+KAAEEV Q  K KV  AEEE++     E+  ++   A +HL E
Subjt:  AGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDE

Sequences

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CDS sequence

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CATTTCTTCATCTTTGTATTCTTTCTTTTCATTTTCAGAAATATGAGAACTGTCAAAGTCAGCAATATCTCAAAACTTACTTCTGAGAGAGATATCAAAGAATTCTTTTC
ATTCTCTGGGGAAATCCTTTACGTTGAAATGCAAAGAGAAAGTGAGAACACCCAGGTTGCTTATGTTACATATAAGGATTCTCAAGGAGCTGATACTGCAATACTTTTGA
CAGGAGCTAAAATTGGTGATCTATCTGTAACAATTACTTTGGTTGAGAATTACCATCTTCCACCTGAAGCAATGTCGTCAATCCTGGATAAAAGGCAAACGGTTACTGGG
ATTGCTCCGAATCAGGCTGAAGACGTCGTAAGTACAATGCTTGCAAAGGGTTTCATCTTGGGGAAGGATGCTCTAAACAAAGCAAAAGCATTCGACGAACGACTCCAATT
GACATCAAATGCTTCTGCAACCGTAGCTTCCATTGACCGCAAGATGGGAATAACTGAGAAAATAACCGCAGGCACAGCAGTGGTGAATGAAAAGGTCAGGGAGATGGATG
AAATGTTCCAAGTTAGGGAGAAGACGAAATCCGCGCTTGCCGTTGCAGAGCAAAAGGCAACAAGCGCGGGAACAGCGCTGATGAGCAATTATTATGTGTTAACTGGAGCA
GCATGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCTGAGGAAGTGACCCAAATGACAAAGGTAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGTATATA
TCGGGAAAGAACGGGGATTATTAGTAACTTCGCCGAGCTCCATCTGGACGAGCCTTTACCTGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCAGATAGATAG

mRNA sequence

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Protein sequence

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HFFIFVFFLFIFRNMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTG
IAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNYYVLTGA
AWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

Cucsat.G4388 (gene) of Cucumber (B10) v3 genome