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Cucsat.G4390 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4390
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionBeta-galactosidase
Genome locationctg1173:1664968..1669802
RNA-Seq ExpressionCucsat.G4390
SyntenyCucsat.G4390
Gene Ontology termsGO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041479.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]4.08e-1863.29Show/hide
Query:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFSV----AVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPP
        +VS+R+ E+TLET +N TNDGNQTEE   SFSV    +VDAR+S TMDEWFR LQKTSKN   S  QSS  P  PH PP
Subjt:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFSV----AVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPP

KAA0050638.1 Beta-galactosidase [Cucumis melo var. makuwa]2.38e-1852.73Show/hide
Query:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFS----VAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSHVPPSELNAPVFPSQTAS
        +VSKR+ EH LE  +N TNDGNQTEE   SFS    +AVDARMS  MDEWF RLQKT +N   S LQSSA P  PHTP              V P QTA 
Subjt:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFS----VAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSHVPPSELNAPVFPSQTAS

Query:  AHLSNHFLHP
           +N F+ P
Subjt:  AHLSNHFLHP

TYK07795.1 Beta-galactosidase [Cucumis melo var. makuwa]3.16e-1852.73Show/hide
Query:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFS----VAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSHVPPSELNAPVFPSQTAS
        +VSKR+ EH LE  +N TNDGNQTEE   SFS    +AVDARMS  MDEWF RLQKT +N   S LQSSA P  PHTP              V P QTA 
Subjt:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFS----VAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSHVPPSELNAPVFPSQTAS

Query:  AHLSNHFLHP
           +N F+ P
Subjt:  AHLSNHFLHP

TYK26198.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]8.82e-1337.93Show/hide
Query:  TLKNVTNDGNQTEEIATSFSVAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSAL-------PNKPHTPPHTSHVPPSELNAPVFPSQTASA--HLSNHF
        TL N T DGNQTEE A   S A +A ++  +DEWF  LQ TS+N +S +  SSA        P K HTP H   +PP++L  P   S    +  H+  H 
Subjt:  TLKNVTNDGNQTEEIATSFSVAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSAL-------PNKPHTPPHTSHVPPSELNAPVFPSQTASA--HLSNHF

Query:  LHPRPIMLPTPRFIFCHLILTGHHSFCRQICMSCHPLTRAIILML
        L P     P                   QICM  H LT   ILML
Subjt:  LHPRPIMLPTPRFIFCHLILTGHHSFCRQICMSCHPLTRAIILML

TYK27008.1 uncharacterized protein E5676_scaffold901G00150 [Cucumis melo var. makuwa]4.37e-1756.63Show/hide
Query:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFSVA----VDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSH
        +V +R+ EHTL T +N TNDGNQ +E   SF  A    VDARMS  MDEWFRRLQKTSKN   S LQ SA    P+ PPH ++
Subjt:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFSVA----VDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSH

TrEMBL top hitse value%identityAlignment
A0A5A7TJD7 UBN2_3 domain-containing protein1.97e-1863.29Show/hide
Query:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFSV----AVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPP
        +VS+R+ E+TLET +N TNDGNQTEE   SFSV    +VDAR+S TMDEWFR LQKTSKN   S  QSS  P  PH PP
Subjt:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFSV----AVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPP

A0A5A7U5T5 Beta-galactosidase1.15e-1852.73Show/hide
Query:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFS----VAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSHVPPSELNAPVFPSQTAS
        +VSKR+ EH LE  +N TNDGNQTEE   SFS    +AVDARMS  MDEWF RLQKT +N   S LQSSA P  PHTP              V P QTA 
Subjt:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFS----VAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSHVPPSELNAPVFPSQTAS

Query:  AHLSNHFLHP
           +N F+ P
Subjt:  AHLSNHFLHP

A0A5D3C8I9 Beta-galactosidase1.53e-1852.73Show/hide
Query:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFS----VAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSHVPPSELNAPVFPSQTAS
        +VSKR+ EH LE  +N TNDGNQTEE   SFS    +AVDARMS  MDEWF RLQKT +N   S LQSSA P  PHTP              V P QTA 
Subjt:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFS----VAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSHVPPSELNAPVFPSQTAS

Query:  AHLSNHFLHP
           +N F+ P
Subjt:  AHLSNHFLHP

A0A5D3DRM9 Retrovirus-related Pol polyprotein from transposon TNT 1-944.27e-1337.93Show/hide
Query:  TLKNVTNDGNQTEEIATSFSVAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSAL-------PNKPHTPPHTSHVPPSELNAPVFPSQTASA--HLSNHF
        TL N T DGNQTEE A   S A +A ++  +DEWF  LQ TS+N +S +  SSA        P K HTP H   +PP++L  P   S    +  H+  H 
Subjt:  TLKNVTNDGNQTEEIATSFSVAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSAL-------PNKPHTPPHTSHVPPSELNAPVFPSQTASA--HLSNHF

Query:  LHPRPIMLPTPRFIFCHLILTGHHSFCRQICMSCHPLTRAIILML
        L P     P                   QICM  H LT   ILML
Subjt:  LHPRPIMLPTPRFIFCHLILTGHHSFCRQICMSCHPLTRAIILML

A0A5D3DU33 Retrotran_gag_3 domain-containing protein2.12e-1756.63Show/hide
Query:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFSVA----VDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSH
        +V +R+ EHTL T +N TNDGNQ +E   SF  A    VDARMS  MDEWFRRLQKTSKN   S LQ SA    P+ PPH ++
Subjt:  IVSKRNNEHTLETLKNVTNDGNQTEEIATSFSVA----VDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGTTCTCTCTCCTTTCAATATTGTATCAAAGCGGAACAATGAACACACCCTAGAAACCCTGAAAAACGTAACCAATGATGGAAATCAAACAGAAGAGATAGCCAC
CAGTTTTAGTGTTGCTGTCGATGCTCGGATGAGTGTTACCATGGACGAATGGTTCAGGCGCCTACAGAAAACGTCCAAAAATAAATTATCGTCAGTTCTGCAATCATCTG
CACTACCGAACAAGCCTCACACACCGCCACACACCTCCCATGTGCCACCGTCGGAGTTGAATGCGCCGGTTTTTCCTTCTCAGACGGCGTCAGCCCATCTATCCAACCAT
TTTCTTCATCCACGGCCTATAATGCTCCCCACGCCTCGATTTATATTCTGCCACCTAATTCTGACCGGCCACCACAGCTTCTGCCGTCAAATATGCATGTCCTGTCACCC
ACTAACCCGAGCTATCATCCTGATGTTAAAATCCTCAAATTCACTCAACATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGTTCTCTCTCCTTTCAATATTGTATCAAAGCGGAACAATGAACACACCCTAGAAACCCTGAAAAACGTAACCAATGATGGAAATCAAACAGAAGAGATAGCCAC
CAGTTTTAGTGTTGCTGTCGATGCTCGGATGAGTGTTACCATGGACGAATGGTTCAGGCGCCTACAGAAAACGTCCAAAAATAAATTATCGTCAGTTCTGCAATCATCTG
CACTACCGAACAAGCCTCACACACCGCCACACACCTCCCATGTGCCACCGTCGGAGTTGAATGCGCCGGTTTTTCCTTCTCAGACGGCGTCAGCCCATCTATCCAACCAT
TTTCTTCATCCACGGCCTATAATGCTCCCCACGCCTCGATTTATATTCTGCCACCTAATTCTGACCGGCCACCACAGCTTCTGCCGTCAAATATGCATGTCCTGTCACCC
ACTAACCCGAGCTATCATCCTGATGTTAAAATCCTCAAATTCACTCAACATTTGA
Protein sequenceShow/hide protein sequence
MCVLSPFNIVSKRNNEHTLETLKNVTNDGNQTEEIATSFSVAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSHVPPSELNAPVFPSQTASAHLSNH
FLHPRPIMLPTPRFIFCHLILTGHHSFCRQICMSCHPLTRAIILMLKSSNSLNI