; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G440 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G440
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description28 kDa ribonucleoprotein, chloroplastic
Genome locationctg1:9019948..9022800
RNA-Seq ExpressionCucsat.G440
SyntenyCucsat.G440
Gene Ontology termsGO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049207.1 putative G3BP-like protein [Cucumis melo var. makuwa]3.26e-15794.16Show/hide
Query:  MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG
        MAAAAAATGASFF T LRGSRSKHW SDSLLATPSTQVLPILSRSL IESP LRASSE+WRPV+IISAAVVQGETAVTVGVEEGVEEET VEGGSPVESG
Subjt:  MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG

Query:  STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
        STKLYFGNLPYSVDSSQLAAIVQD+G+AELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDG+AYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
Subjt:  STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL

Query:  SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINEL
        SWSVTSEILTQAFQEYGNVVGARVIY+GETGKSRGYGFVSYSTKSEMETALE +NE+
Subjt:  SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINEL

KAG6582419.1 hypothetical protein SDJN03_22421, partial [Cucurbita argyrosperma subsp. sororia]2.20e-14379.93Show/hide
Query:  AAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEE--TEVEGGSPVESGST
        AAATG SFF T +RGSRS  WLSDS LATPSTQVLP+LSR LA++S  LRA SE+ RP  IISA  VQGE A+TVGVEEG E+E    V+GGSPVESGST
Subjt:  AAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEE--TEVEGGSPVESGST

Query:  KLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSW
        KLYFGNLPYSVDS QLAAIVQDYG+AELIEVLYDR+TGKSRGFAFVTM+SI+DCNKVIENL+G+ YMGRILRVNFSDKPKPKE L+PETEYKLFV NL+W
Subjt:  KLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSW

Query:  SVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG
        SVTSE LTQAFQEYGNVVGARVIY+GETG+SRGYGFVSYSTKSEMETAL  +N+   EGRV+ VSLAEG QA G
Subjt:  SVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG

XP_004134038.1 28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus]1.04e-186100Show/hide
Query:  MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG
        MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG
Subjt:  MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG

Query:  STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
        STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
Subjt:  STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL

Query:  SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG
        SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG
Subjt:  SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG

XP_016898952.1 PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein [Cucumis melo]3.10e-16293.98Show/hide
Query:  MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG
        MAAAAAATGASFF T LRGSRSKHW SDSLLATPSTQVLPILSRSL IESP LRASSE+WRPV+IISAAVVQGETAV VGVEEGVEEET VEGGSPVESG
Subjt:  MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG

Query:  STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
        STKLYFGNLPYSVDSSQLAAIVQD+G+AELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDG+AYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
Subjt:  STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL

Query:  SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRV
        SWSVTSEILTQAFQEYGNVVGARVIY+GETGKSRGYGFVSYSTKSEMETALE +NE+ELEGRVIRV
Subjt:  SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRV

XP_022157973.1 28 kDa ribonucleoprotein, chloroplastic [Momordica charantia]1.00e-15182.62Show/hide
Query:  MAAAAAATGASFFAT--SLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEET----EVEGG
        MAAAAA  G+SF A+  S +G RSKHWLSDSLLA PSTQ+LP+LSR LA+ES  LRA SEKWRPV+ ISAAVVQGE AVT   EEGV EE      V GG
Subjt:  MAAAAAATGASFFAT--SLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEET----EVEGG

Query:  SPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYK
        SPVE+GSTKLYFGNLPYSVDSSQLA IVQ++G+ ELIEVLYDRNTGKSRGFAFVTMSSIEDCN+VIENLDGSAYMGR+LRVNFSDKPKPKEPLYPETEYK
Subjt:  SPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYK

Query:  LFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG
        LFVGNLSWSVTSE LTQAFQEYGNVVGARVIY+GETG+SRGYGFVSYSTK EME ALE +NE+ELEGRVIRVSLAEGKQA G
Subjt:  LFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG

TrEMBL top hitse value%identityAlignment
A0A0A0L496 Uncharacterized protein5.03e-187100Show/hide
Query:  MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG
        MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG
Subjt:  MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG

Query:  STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
        STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
Subjt:  STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL

Query:  SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG
        SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG
Subjt:  SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG

A0A1S4DSH7 LOW QUALITY PROTEIN: putative G3BP-like protein1.50e-16293.98Show/hide
Query:  MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG
        MAAAAAATGASFF T LRGSRSKHW SDSLLATPSTQVLPILSRSL IESP LRASSE+WRPV+IISAAVVQGETAV VGVEEGVEEET VEGGSPVESG
Subjt:  MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG

Query:  STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
        STKLYFGNLPYSVDSSQLAAIVQD+G+AELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDG+AYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
Subjt:  STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL

Query:  SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRV
        SWSVTSEILTQAFQEYGNVVGARVIY+GETGKSRGYGFVSYSTKSEMETALE +NE+ELEGRVIRV
Subjt:  SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRV

A0A5D3CZH4 Putative G3BP-like protein1.58e-15794.16Show/hide
Query:  MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG
        MAAAAAATGASFF T LRGSRSKHW SDSLLATPSTQVLPILSRSL IESP LRASSE+WRPV+IISAAVVQGETAVTVGVEEGVEEET VEGGSPVESG
Subjt:  MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESG

Query:  STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
        STKLYFGNLPYSVDSSQLAAIVQD+G+AELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDG+AYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
Subjt:  STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL

Query:  SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINEL
        SWSVTSEILTQAFQEYGNVVGARVIY+GETGKSRGYGFVSYSTKSEMETALE +NE+
Subjt:  SWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINEL

A0A6J1DUT6 28 kDa ribonucleoprotein, chloroplastic4.85e-15282.62Show/hide
Query:  MAAAAAATGASFFAT--SLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEET----EVEGG
        MAAAAA  G+SF A+  S +G RSKHWLSDSLLA PSTQ+LP+LSR LA+ES  LRA SEKWRPV+ ISAAVVQGE AVT   EEGV EE      V GG
Subjt:  MAAAAAATGASFFAT--SLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEET----EVEGG

Query:  SPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYK
        SPVE+GSTKLYFGNLPYSVDSSQLA IVQ++G+ ELIEVLYDRNTGKSRGFAFVTMSSIEDCN+VIENLDGSAYMGR+LRVNFSDKPKPKEPLYPETEYK
Subjt:  SPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYK

Query:  LFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG
        LFVGNLSWSVTSE LTQAFQEYGNVVGARVIY+GETG+SRGYGFVSYSTK EME ALE +NE+ELEGRVIRVSLAEGKQA G
Subjt:  LFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG

A0A6J1FA65 28 kDa ribonucleoprotein, chloroplastic-like7.00e-14178.85Show/hide
Query:  AAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETE-------VEGGSPV
        A A GAS F T       K WLSD+LL TPS  + PILSRSLAIES  LRA SE+WRP + ISAAVVQ + AVT GVEEGV +ET        V+GGSPV
Subjt:  AAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETE-------VEGGSPV

Query:  ESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFV
        ESG TKLYFGNLPYSVDSSQLA IVQDYG+AELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDG+AYMGR+LRVNFSDKPKPK  LYP++EY+L+V
Subjt:  ESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFV

Query:  GNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG
         NLSWSVTSE L QAFQEYGNVVGARVIYD ETGKSRGYGFVSYSTKSEMETALE  NELELEGRVIRVSLA+GKQA G
Subjt:  GNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG

SwissProt top hitse value%identityAlignment
P19683 31 kDa ribonucleoprotein, chloroplastic4.7e-3741.67Show/hide
Query:  ETAVTVGVEEGVE-EETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRI
        E     G  + VE +E E E   P E    KL+ GNLPY VDS  LA + +  G+ E+ EV+Y+R+T +SRGF FVTMS++E+  K +E  +     GR+
Subjt:  ETAVTVGVEEGVE-EETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRI

Query:  LRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSL
        L VN +    ++P+ + P   E  Y+++VGN+ W +    L Q F E+G VV ARV+YD ETG+SRG+GFV+ ++++EM  A+  ++   L+GR IRV++
Subjt:  LRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSL

Query:  AEGK
        AE +
Subjt:  AEGK

P19684 33 kDa ribonucleoprotein, chloroplastic3.0e-3941.71Show/hide
Query:  ETAVTVGVEEGVEEETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRIL
        E A++   EE +EE+ E      VE G  +LY GNLP+S+ SSQL+ I  + G    +E++YDR T +SRGFAFVTM S+E+  + I   DGS   GR +
Subjt:  ETAVTVGVEEGVEEETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRIL

Query:  RVNFSDKPKPKE------------PLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEG
        +VNF + P+  E              + ++ +KL+V NLSW++TS+ L  AF +    + A+VIYD  +G+SRG+GF+++S+   M +AL+T+NE+ELEG
Subjt:  RVNFSDKPKPKE------------PLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEG

Query:  RVIRVSLAEGK
        R +R+++A  K
Subjt:  RVIRVSLAEGK

P28644 28 kDa ribonucleoprotein, chloroplastic4.3e-3843.4Show/hide
Query:  AVVQGET----AVTVGVEEGVEEETEVEGGSPVES--GSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIEN
        AV++GE+    AV+ G E  V +E  VEGG          KL+ GNLPY VDS +LA I    G+ E+ EV+Y+R T +SRGF FVTMS++E+  K +E 
Subjt:  AVVQGET----AVTVGVEEGVEEETEVEGGSPVES--GSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIEN

Query:  LDGSAYMGRILRVNFSDKPKPKEPLYPETEY----KLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELE
        L+G    GR L VN    P+      P  ++    +++VGNL W V +  L Q F E+G VV ARV+ D ETG+SRG+GFV+ S++SE+  A+  ++   
Subjt:  LDGSAYMGRILRVNFSDKPKPKEPLYPETEY----KLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELE

Query:  LEGRVIRVSLAE
        L+GR +RV++AE
Subjt:  LEGRVIRVSLAE

Q08935 29 kDa ribonucleoprotein A, chloroplastic5.2e-3640.3Show/hide
Query:  EEGVEEETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKP
        ++GVEEE          S   K++ GNLP+S DS+ LA + +  G  E++EV+YD+ TG+SRGF FVTMSS E+     +  +G    GR LRVN    P
Subjt:  EEGVEEETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKP

Query:  KPKEPL----------YPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEG
        + +E              ++  +++VGNL+W V  + L   F E G VV A+V+YD ++G+SRG+GFV+YS+  E+  A+E+++ ++L GR IRVS AE 
Subjt:  KPKEPL----------YPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEG

Query:  K
        +
Subjt:  K

Q9FGS0 RNA-binding protein CP31B, chloroplastic2.8e-3737.07Show/hide
Query:  SRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLR--ASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEG--GSPVESGSTKLYFGNLPYSVDS
        S   H  + SL + P    L + S++L   SP++   + +  W       A   +GE     G    V+E  E E   G P      KL+ GNLPY VDS
Subjt:  SRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLR--ASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEG--GSPVESGSTKLYFGNLPYSVDS

Query:  SQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQ
          LA + +  G  E+ EV+Y+R+T +SRGF FVTMS++E+  K +E  +     GR L VN +     +P+ ++P   +  ++++VGNL W V S  L +
Subjt:  SQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQ

Query:  AFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAE
         F E+G VV ARV+ D ETG+SRG+GFV  S ++E+  A+  ++   LEGR I+V++AE
Subjt:  AFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAE

Arabidopsis top hitse value%identityAlignment
AT1G60000.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.1e-7259.91Show/hide
Query:  LLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGS----PVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAF
        LLR +    +P++I S +  +    ++  +   +EEE + +G S    P  + +TKLYFGNLPY+VDS+ LA I+QD+   EL+EVLY+R+TG+SRGFAF
Subjt:  LLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGS----PVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAF

Query:  VTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKP-KEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSE
        VTMS++EDCN +I+NLDG+ Y+GR L+VNF+DKPKP KEPLYPETE+KLFVGNLSW+VTSE L  AF+E G+VVGARV++DG+TG+SRGYGFV YS+K+E
Subjt:  VTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKP-KEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSE

Query:  METALETINELELEGRVIRVSLAEGKQ
        METALE+++  ELEGR IRV+LA+GK+
Subjt:  METALETINELELEGRVIRVSLAEGKQ

AT2G37220.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-3638.46Show/hide
Query:  VTVGVEEGVEEETEVEGGSPVE---SGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRIL
        V +  E  VEE+   +   P E   S   KL+ GNLP++VDS+QLA + +  G  E++EV+YD+ TG+SRGF FVTMSS+ +     +  +G    GR L
Subjt:  VTVGVEEGVEEETEVEGGSPVE---SGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRIL

Query:  RVNFSDKPKPKEPLY---PETEY-------------------KLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETAL
        RVN    P  +E  +   P + +                   +++VGNLSW V    L   F E G VV ARVIYD ++G+S+G+GFV+Y +  E++ A+
Subjt:  RVNFSDKPKPKEPLY---PETEY-------------------KLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETAL

Query:  ETINELELEGRVIRVSLAEGK
        ++++  +L+GR IRVS AE +
Subjt:  ETINELELEGRVIRVSLAEGK

AT3G52380.1 chloroplast RNA-binding protein 331.1e-3636.41Show/hide
Query:  AVVQGETAVTVGVEEGVEEETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAY
        A V+ E  V    +EG EE  E +  +       +LY GNLPY++ SS+L+ I  + G    ++++YD+ T +SRGF FVTM SIE+  + ++  + S  
Subjt:  AVVQGETAVTVGVEEGVEEETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAY

Query:  MGRILRVNFSDKPKPKE------------PLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINE
         GR ++VNF + P+  E              Y ++ +K++ GNL W++TS+ L  AF +   V+GA+VIY+  TG+SRG+GF+S+ +   +++AL T+N 
Subjt:  MGRILRVNFSDKPKPKE------------PLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINE

Query:  LELEGRVIRVSLAEGKQ
        +E+EGR +R++LA  ++
Subjt:  LELEGRVIRVSLAEGKQ

AT4G24770.1 31-kDa RNA binding protein1.8e-3641.79Show/hide
Query:  VEEGVEEETEVEGGS-------PVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRIL
        V EG E E +V  G+       P  S   KL+ GNL Y V+S  LA + +  G  E+ EV+Y+R T +SRGF FVTMSS+++    +E  +     GR+L
Subjt:  VEEGVEEETEVEGGS-------PVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRIL

Query:  RVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLA
         VN +     +P+ + P   E  ++++VGNL W V +  L Q F E+G VV ARV+YD ETG+SRG+GFV+ S   E+  A+  ++   LEGR IRV++A
Subjt:  RVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLA

Query:  E
        E
Subjt:  E

AT5G50250.1 chloroplast RNA-binding protein 31B2.0e-3837.07Show/hide
Query:  SRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLR--ASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEG--GSPVESGSTKLYFGNLPYSVDS
        S   H  + SL + P    L + S++L   SP++   + +  W       A   +GE     G    V+E  E E   G P      KL+ GNLPY VDS
Subjt:  SRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLR--ASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEG--GSPVESGSTKLYFGNLPYSVDS

Query:  SQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQ
          LA + +  G  E+ EV+Y+R+T +SRGF FVTMS++E+  K +E  +     GR L VN +     +P+ ++P   +  ++++VGNL W V S  L +
Subjt:  SQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQ

Query:  AFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAE
         F E+G VV ARV+ D ETG+SRG+GFV  S ++E+  A+  ++   LEGR I+V++AE
Subjt:  AFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCGCTGCCGCCACCGGAGCCTCCTTCTTCGCCACTTCCTTAAGGGGTTCACGGTCCAAGCACTGGCTCTCTGATTCTCTCCTCGCAACCCCATCCACTCA
AGTTTTGCCTATATTGTCCCGCTCTCTAGCCATTGAATCGCCTCTGCTCAGAGCTTCCTCGGAGAAGTGGCGGCCGGTTATGATAATCTCGGCCGCCGTTGTGCAAGGAG
AGACCGCTGTGACGGTTGGAGTTGAAGAGGGTGTGGAGGAGGAGACGGAGGTGGAAGGTGGTTCTCCAGTGGAGTCTGGGAGTACTAAGCTGTACTTTGGGAATCTGCCT
TACAGTGTTGATAGTTCACAGCTCGCCGCTATCGTTCAGGATTATGGTATCGCCGAGCTCATTGAGGTTCTATATGACAGGAATACTGGAAAAAGTAGAGGATTTGCATT
TGTAACCATGAGCAGTATTGAAGATTGCAATAAAGTGATTGAAAATCTGGATGGATCTGCTTACATGGGCAGAATTTTGAGGGTTAATTTCTCAGACAAACCCAAGCCCA
AGGAACCTTTGTATCCAGAAACTGAGTATAAACTTTTTGTCGGAAACTTATCTTGGTCAGTAACATCTGAAATTTTGACACAAGCATTTCAAGAATATGGAAATGTGGTA
GGAGCAAGAGTCATTTATGACGGGGAGACCGGAAAGTCACGTGGTTATGGCTTTGTTTCTTATTCAACAAAATCAGAAATGGAAACAGCTCTTGAAACTATTAATGAACT
GGAACTTGAAGGCAGGGTAATACGTGTAAGCTTGGCTGAAGGAAAACAGGCACATGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCGCTGCCGCCACCGGAGCCTCCTTCTTCGCCACTTCCTTAAGGGGTTCACGGTCCAAGCACTGGCTCTCTGATTCTCTCCTCGCAACCCCATCCACTCA
AGTTTTGCCTATATTGTCCCGCTCTCTAGCCATTGAATCGCCTCTGCTCAGAGCTTCCTCGGAGAAGTGGCGGCCGGTTATGATAATCTCGGCCGCCGTTGTGCAAGGAG
AGACCGCTGTGACGGTTGGAGTTGAAGAGGGTGTGGAGGAGGAGACGGAGGTGGAAGGTGGTTCTCCAGTGGAGTCTGGGAGTACTAAGCTGTACTTTGGGAATCTGCCT
TACAGTGTTGATAGTTCACAGCTCGCCGCTATCGTTCAGGATTATGGTATCGCCGAGCTCATTGAGGTTCTATATGACAGGAATACTGGAAAAAGTAGAGGATTTGCATT
TGTAACCATGAGCAGTATTGAAGATTGCAATAAAGTGATTGAAAATCTGGATGGATCTGCTTACATGGGCAGAATTTTGAGGGTTAATTTCTCAGACAAACCCAAGCCCA
AGGAACCTTTGTATCCAGAAACTGAGTATAAACTTTTTGTCGGAAACTTATCTTGGTCAGTAACATCTGAAATTTTGACACAAGCATTTCAAGAATATGGAAATGTGGTA
GGAGCAAGAGTCATTTATGACGGGGAGACCGGAAAGTCACGTGGTTATGGCTTTGTTTCTTATTCAACAAAATCAGAAATGGAAACAGCTCTTGAAACTATTAATGAACT
GGAACTTGAAGGCAGGGTAATACGTGTAAGCTTGGCTGAAGGAAAACAGGCACATGGGTAG
Protein sequenceShow/hide protein sequence
MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKWRPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESGSTKLYFGNLP
YSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVV
GARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQAHG