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Cucsat.G4423 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4423
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionneurochondrin homolog isoform X1
Genome locationctg1173:870163..873536
RNA-Seq ExpressionCucsat.G4423
SyntenyCucsat.G4423
Gene Ontology termsNA
InterPro domainsIPR008709 - Neurochondrin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452895.1 PREDICTED: neurochondrin isoform X4 [Cucumis melo]9.77e-1564.94Show/hide
Query:  RRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF
        R ++T    V  II +  NI G+    LI+ENTLMKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG F
Subjt:  RRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF

XP_011654484.1 uncharacterized protein LOC105435406 [Cucumis sativus]8.80e-4877.36Show/hide
Query:  MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGR------------------------FGRIHWNNEANLEQLIDIRRFVWLVAKSWFQCTE
        MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGR                        FGRIHWNNEANLEQLIDIRRFVWLVAKSWFQCTE
Subjt:  MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGR------------------------FGRIHWNNEANLEQLIDIRRFVWLVAKSWFQCTE

Query:  FRLVSR
        FRLVSR
Subjt:  FRLVSR

XP_022935920.1 uncharacterized protein LOC111442684 isoform X1 [Cucurbita moschata]1.02e-1460.71Show/hide
Query:  IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF
        I+ +Q  R ++T    V  II +  N+ G+    LI+ENTLMKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG F
Subjt:  IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF

XP_022935921.1 uncharacterized protein LOC111442684 isoform X2 [Cucurbita moschata]1.02e-1460.71Show/hide
Query:  IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF
        I+ +Q  R ++T    V  II +  N+ G+    LI+ENTLMKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG F
Subjt:  IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF

XP_022976134.1 neurochondrin homolog isoform X2 [Cucurbita maxima]1.02e-1460.71Show/hide
Query:  IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF
        I+ +Q  R ++T    V  II +  N+ G+    LI+ENTLMKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG F
Subjt:  IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF

TrEMBL top hitse value%identityAlignment
A0A0A0KLC1 Uncharacterized protein2.08e-19100Show/hide
Query:  MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGR
        MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGR
Subjt:  MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGR

A0A1S3BUW9 neurochondrin isoform X44.73e-1564.94Show/hide
Query:  RRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF
        R ++T    V  II +  NI G+    LI+ENTLMKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG F
Subjt:  RRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF

A0A6J1F631 uncharacterized protein LOC111442684 isoform X24.92e-1560.71Show/hide
Query:  IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF
        I+ +Q  R ++T    V  II +  N+ G+    LI+ENTLMKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG F
Subjt:  IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF

A0A6J1IL84 neurochondrin homolog isoform X14.92e-1560.71Show/hide
Query:  IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF
        I+ +Q  R ++T    V  II +  N+ G+    LI+ENTLMKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG F
Subjt:  IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF

A0A6J1IMN8 neurochondrin homolog isoform X24.92e-1560.71Show/hide
Query:  IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF
        I+ +Q  R ++T    V  II +  N+ G+    LI+ENTLMKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG F
Subjt:  IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G32050.1 neurochondrin family protein2.8e-0652Show/hide
Query:  LINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF
        L +E    KV + LNET G V EYL+DAKE+G +KG D+LA  + VIG +
Subjt:  LINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGATTGGGGGTCTCACACCATAGTAGCTAGGCAACTGAGTAGAAGGATGTCAACCTTGAAAGGCAATGTTCATACGATTATAATAATCCAACACAATATTTTTGG
GAAACTTATTTGGGGTCTTATCAATGAAAACACACTGATGAAAGTGAATAGAGGGCTTAATGAGACTACTGGGGTTGTGCTAGAATACTTGCAAGATGCAAAGGAGTATG
GACAAAGAAAAGGAGATGACATTTTAGCATTATTTATACTGGTTATTGGAAGGTTTGGAAGAATCCATTGGAACAATGAAGCCAACTTGGAACAATTGATCGATATAAGA
CGTTTTGTATGGTTGGTAGCAAAATCTTGGTTCCAATGTACTGAATTTAGGCTTGTTAGTAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGATTGGGGGTCTCACACCATAGTAGCTAGGCAACTGAGTAGAAGGATGTCAACCTTGAAAGGCAATGTTCATACGATTATAATAATCCAACACAATATTTTTGG
GAAACTTATTTGGGGTCTTATCAATGAAAACACACTGATGAAAGTGAATAGAGGGCTTAATGAGACTACTGGGGTTGTGCTAGAATACTTGCAAGATGCAAAGGAGTATG
GACAAAGAAAAGGAGATGACATTTTAGCATTATTTATACTGGTTATTGGAAGGTTTGGAAGAATCCATTGGAACAATGAAGCCAACTTGGAACAATTGATCGATATAAGA
CGTTTTGTATGGTTGGTAGCAAAATCTTGGTTCCAATGTACTGAATTTAGGCTTGTTAGTAGATAA
Protein sequenceShow/hide protein sequence
MYDWGSHTIVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRFGRIHWNNEANLEQLIDIR
RFVWLVAKSWFQCTEFRLVSR