; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G4509 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4509
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionMediator of RNA polymerase II transcription subunit 6
Genome locationctg1216:676569..686403
RNA-Seq ExpressionCucsat.G4509
SyntenyCucsat.G4509
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149176.2 mediator of RNA polymerase II transcription subunit 6 [Cucumis sativus]5.18e-182100Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV
        RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV

XP_008447572.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6 isoform X1 [Cucumis melo]2.11e-17698.04Show/hide
Query:  MATPPPPT-APPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPPT APPGTGNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPPT-APPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGYAPA TA+TEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_022148297.1 mediator of RNA polymerase II transcription subunit 6 [Momordica charantia]7.29e-17094.88Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPPPP APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGY PA TAE EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_023524903.1 mediator of RNA polymerase II transcription subunit 6 [Cucurbita pepo subsp. pepo]1.94e-16492.91Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPPPP    G GNFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAK TI+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGY PA  +E EKGPE+QQGE QQP+ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_038896808.1 mediator of RNA polymerase II transcription subunit 6 [Benincasa hispida]9.65e-17597.24Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPPPPTAPPG GNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENE EEVKPAKETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYAPA TAETEKGPEN  GESQQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

TrEMBL top hitse value%identityAlignment
A0A0A0L8C2 Mediator of RNA polymerase II transcription subunit 62.51e-182100Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV
        RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV

A0A1S3BHR9 Mediator of RNA polymerase II transcription subunit 61.02e-17698.04Show/hide
Query:  MATPPPPT-APPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPPT APPGTGNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPPT-APPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGYAPA TA+TEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A5D3CDR8 Mediator of RNA polymerase II transcription subunit 61.02e-17698.04Show/hide
Query:  MATPPPPT-APPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPPT APPGTGNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPPT-APPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGYAPA TA+TEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A6J1D4P7 Mediator of RNA polymerase II transcription subunit 63.53e-17094.88Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPPPP APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGY PA TAE EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A6J1G911 Mediator of RNA polymerase II transcription subunit 62.68e-16492.91Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPPPP    G GNFEGGP  AAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETI+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGY PA  +E EKGPE+QQGE QQP+ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

SwissProt top hitse value%identityAlignment
F4IXJ7 Mediator of RNA polymerase II transcription subunit 61.1e-8561.03Show/hide
Query:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR
        TA    GN     +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG+EYML +  EP+LFVFR
Subjt:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR

Query:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY---
        KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSR +Y ISKAFT A+SKLE I                                     G+   
Subjt:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY---

Query:  ---VDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
            +++NE  E KPA ET++ KE+KRVD IL SL RKL P PPPPPFPEGY        ++    Q GESQ P  DPIIDQGPAKRMKF
Subjt:  ---VDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

Q3SZY9 Mediator of RNA polymerase II transcription subunit 64.0e-2234.44Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M G+EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCSVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----AKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAP
         IYQAP L SV  +RV  A++ I  AF  A S        GY        E ++VKP     +E  +  + +RVD +L  L++K PP        E   P
Subjt:  SIYQAPQLCSVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----AKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAP

Query:  AATAETEKGPENQQGESQQPSADPIIDQ------GPAKRMK
            + E  P  +  +S++      + Q       P KRM+
Subjt:  AATAETEKGPENQQGESQQPSADPIIDQ------GPAKRMK

Q54PN3 Putative mediator of RNA polymerase II transcription subunit 68.3e-2838.12Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI
        D+T + +RD LWL  YPL+   +  YF+ S FYD  CNNEQL+M+    LDLS L  M G+EY L + +EP  F+  KQ R  P  V     YY+++G+I
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI

Query:  YQAPQLCSVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVK-PAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAE
        YQAP+L  VF +RVS+++ ++S+AF + SS +      GY   +D  N+ E+ K  A      ++ KR+D ++ SL  K P    P   P+      T +
Subjt:  YQAPQLCSVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVK-PAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAE

Query:  TE
         +
Subjt:  TE

Q7Q107 Mediator of RNA polymerase II transcription subunit 61.1e-2234.89Show/hide
Query:  ICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQ
        I + D  W+    L+   V DYF+   +PFYD TCNNE +RM+      L  L+ MTG+EY+   V +P L+V RKQ R  P + TPM  YYI+ G++YQ
Subjt:  ICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQ

Query:  APQLCSVFAARVSRALYYISKAFTTASS--------------KLEKIGYVDSENESEEVKPAK-ETINFKEVKRVDHILASLQRKLP-PAPPPPPFPEGY
        AP L SVF +R+   ++++  AF  ASS                 K     ++ ++++  P K E  +  + +RVD +L  L RK P P P     P G 
Subjt:  APQLCSVFAARVSRALYYISKAFTTASS--------------KLEKIGYVDSENESEEVKPAK-ETINFKEVKRVDHILASLQRKLP-PAPPPPPFPEGY

Query:  APAATAETEKGPENQQGESQQPSAD-PIIDQGPAK
         P+ TA          G+S    AD  +I Q P +
Subjt:  APAATAETEKGPENQQGESQQPSAD-PIIDQGPAK

Q921D4 Mediator of RNA polymerase II transcription subunit 62.1e-2336.1Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M GIEY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCSVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----AKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAP
         IYQAP L SV  +RV  A++ I  AF  A S        GY        E E+VKP     +E  +  + +RVD +L  L++K PP        E   P
Subjt:  SIYQAPQLCSVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----AKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAP

Query:  AATAETEKGPENQQGESQQPSADPIIDQ------GPAKRMK
           A+ E  P  +  +S++  +   I Q       P KRM+
Subjt:  AATAETEKGPENQQGESQQPSADPIIDQ------GPAKRMK

Arabidopsis top hitse value%identityAlignment
AT3G21350.1 RNA polymerase transcriptional regulation mediator-related2.6e-9371.89Show/hide
Query:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR
        TA    GN     +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG+EYML +  EP+LFVFR
Subjt:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR

Query:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--EVKPAKETINFKEVKRVDHILASLQRKLPP
        KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSR +Y ISKAFT A+SKLE I  VD+EN++E  E KPA ET++ KE+KRVD IL SL RKL P
Subjt:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--EVKPAKETINFKEVKRVDHILASLQRKLPP

Query:  APPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
         PPPPPFPEGY        ++    Q GESQ P  DPIIDQGPAKRMKF
Subjt:  APPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

AT3G21350.2 RNA polymerase transcriptional regulation mediator-related8.1e-8761.03Show/hide
Query:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR
        TA    GN     +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG+EYML +  EP+LFVFR
Subjt:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR

Query:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY---
        KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSR +Y ISKAFT A+SKLE I                                     G+   
Subjt:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY---

Query:  ---VDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
            +++NE  E KPA ET++ KE+KRVD IL SL RKL P PPPPPFPEGY        ++    Q GESQ P  DPIIDQGPAKRMKF
Subjt:  ---VDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCCACCACCACCGACGGCTCCGCCAGGGACCGGGAATTTCGAGGGGGGGCCGCTGCCAGCAGCGCCTCAGCCTCCGGGCACGGACATGACTGGAATTTGCTT
TAGAGACCAGCTTTGGCTCAATACTTACCCTCTTGATCGAAACTTGGTTTTCGATTACTTCGCCTTGTCGCCTTTCTACGACTGGACTTGTAACAACGAACAACTCAGAA
TGCGCTCCATTCACCCCCTCGATCTTTCTCAACTCTCAAAAATGACAGGCATAGAGTACATGCTGAATGAAGTTATGGAGCCTCACCTTTTCGTTTTCAGAAAGCAAAAA
AGGGATGGTCCTGAGAAAGTCACACCGATGCTGACTTATTATATCTTGGATGGTTCAATCTACCAGGCGCCTCAACTTTGCAGTGTTTTTGCTGCTCGCGTTAGTCGGGC
ACTGTATTACATATCAAAGGCCTTTACCACTGCTTCGTCAAAGTTGGAGAAGATAGGATATGTTGATTCTGAAAATGAGAGTGAAGAAGTAAAACCTGCAAAAGAAACCA
TTAACTTTAAGGAAGTAAAGCGAGTTGATCATATTCTTGCATCTTTACAGCGCAAGCTGCCACCTGCCCCACCACCCCCACCATTTCCTGAAGGTTATGCTCCTGCTGCC
ACAGCAGAGACAGAAAAAGGCCCTGAAAATCAGCAAGGAGAGTCACAACAGCCTTCTGCAGATCCCATTATTGATCAGGGTCCAGCTAAAAGGATGAAATTTTCAAGTGT
TTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTCCACCACCACCGACGGCTCCGCCAGGGACCGGGAATTTCGAGGGGGGGCCGCTGCCAGCAGCGCCTCAGCCTCCGGGCACGGACATGACTGGAATTTGCTT
TAGAGACCAGCTTTGGCTCAATACTTACCCTCTTGATCGAAACTTGGTTTTCGATTACTTCGCCTTGTCGCCTTTCTACGACTGGACTTGTAACAACGAACAACTCAGAA
TGCGCTCCATTCACCCCCTCGATCTTTCTCAACTCTCAAAAATGACAGGCATAGAGTACATGCTGAATGAAGTTATGGAGCCTCACCTTTTCGTTTTCAGAAAGCAAAAA
AGGGATGGTCCTGAGAAAGTCACACCGATGCTGACTTATTATATCTTGGATGGTTCAATCTACCAGGCGCCTCAACTTTGCAGTGTTTTTGCTGCTCGCGTTAGTCGGGC
ACTGTATTACATATCAAAGGCCTTTACCACTGCTTCGTCAAAGTTGGAGAAGATAGGATATGTTGATTCTGAAAATGAGAGTGAAGAAGTAAAACCTGCAAAAGAAACCA
TTAACTTTAAGGAAGTAAAGCGAGTTGATCATATTCTTGCATCTTTACAGCGCAAGCTGCCACCTGCCCCACCACCCCCACCATTTCCTGAAGGTTATGCTCCTGCTGCC
ACAGCAGAGACAGAAAAAGGCCCTGAAAATCAGCAAGGAGAGTCACAACAGCCTTCTGCAGATCCCATTATTGATCAGGGTCCAGCTAAAAGGATGAAATTTTCAAGTGT
TTAG
Protein sequenceShow/hide protein sequence
MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQK
RDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAA
TAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV