; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G4571 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4571
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationctg1227:9673..11253
RNA-Seq ExpressionCucsat.G4571
SyntenyCucsat.G4571
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009409 - response to cold (biological process)
GO:0009642 - response to light intensity (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0009782 - photosystem I antenna complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0031409 - pigment binding (molecular function)
GO:0042803 - protein homodimerization activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150882.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis sativus]6.11e-191100Show/hide
Query:  MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAM
        MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAM
Subjt:  MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAM

Query:  LGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIK
        LGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIK
Subjt:  LGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIK

Query:  NAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        NAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  NAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_008444623.1 PREDICTED: photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis melo]6.02e-18094.23Show/hide
Query:  MAVSFSAATALHLHPSSSSYTPLFNPS-QFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA
        MAVS SAAT  HLHPSSSS+TPLFNP+ QF+RLRSPSR +LLIAHAQSEHRQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKWYVQAELVHCRFA
Subjt:  MAVSFSAATALHLHPSSSSYTPLFNPS-QFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA

Query:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI
        MLGV+GVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAF+GLEPGYPGGPLLNPLGIAKD+
Subjt:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI

Query:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_022951251.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita moschata]6.85e-16087.16Show/hide
Query:  MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLI-AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA
        MAVS SAAT+ HL PSSS Y+   +P Q L LRSPSRRT+   A +QS+ RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDP SLKW+VQAELVH RFA
Subjt:  MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLI-AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA

Query:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI
        MLGVSG+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AF+GLEPGYPGGPLLNPLG+AKDI
Subjt:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI

Query:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH T+I TLSS
Subjt:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

XP_023001834.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita maxima]3.79e-16086.92Show/hide
Query:  MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLI-AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA
        MAVS SAAT  HL PSSS Y+   +  Q L LRSPSRRT+   A +QS+ RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDP SLKW+VQAELVH RFA
Subjt:  MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLI-AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA

Query:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI
        MLGVSG+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AF+GLEPGYPGGPLLNPLG+AKDI
Subjt:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI

Query:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        KNAH+WKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH TII TLSSSSP
Subjt:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_038886221.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Benincasa hispida]3.30e-17392.75Show/hide
Query:  MAVSFSAATA----LHLHPSSSS--YTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELV
        MAVS SAATA     HL PSSSS  YTP FNP+Q LRLRSPSRRTLLIA AQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDP SLKWYVQAELV
Subjt:  MAVSFSAATA----LHLHPSSSS--YTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELV

Query:  HCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLG
        H RFAMLGVSG+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAF+GLEPGYPGGPLLNPLG
Subjt:  HCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLG

Query:  IAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        IAKDIKNAH+WKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
Subjt:  IAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRB4 Chlorophyll a-b binding protein, chloroplastic2.96e-191100Show/hide
Query:  MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAM
        MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAM
Subjt:  MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAM

Query:  LGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIK
        LGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIK
Subjt:  LGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIK

Query:  NAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        NAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  NAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A1S3BBL1 Chlorophyll a-b binding protein, chloroplastic2.92e-18094.23Show/hide
Query:  MAVSFSAATALHLHPSSSSYTPLFNPS-QFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA
        MAVS SAAT  HLHPSSSS+TPLFNP+ QF+RLRSPSR +LLIAHAQSEHRQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKWYVQAELVHCRFA
Subjt:  MAVSFSAATALHLHPSSSSYTPLFNPS-QFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA

Query:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI
        MLGV+GVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAF+GLEPGYPGGPLLNPLGIAKD+
Subjt:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI

Query:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A5A7UY53 Chlorophyll a-b binding protein, chloroplastic2.92e-18094.23Show/hide
Query:  MAVSFSAATALHLHPSSSSYTPLFNPS-QFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA
        MAVS SAAT  HLHPSSSS+TPLFNP+ QF+RLRSPSR +LLIAHAQSEHRQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKWYVQAELVHCRFA
Subjt:  MAVSFSAATALHLHPSSSSYTPLFNPS-QFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA

Query:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI
        MLGV+GVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAF+GLEPGYPGGPLLNPLGIAKD+
Subjt:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI

Query:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A6J1GH16 Chlorophyll a-b binding protein, chloroplastic3.32e-16087.16Show/hide
Query:  MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLI-AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA
        MAVS SAAT+ HL PSSS Y+   +P Q L LRSPSRRT+   A +QS+ RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDP SLKW+VQAELVH RFA
Subjt:  MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLI-AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA

Query:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI
        MLGVSG+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AF+GLEPGYPGGPLLNPLG+AKDI
Subjt:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI

Query:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH T+I TLSS
Subjt:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

A0A6J1KNS0 Chlorophyll a-b binding protein, chloroplastic1.83e-16086.92Show/hide
Query:  MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLI-AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA
        MAVS SAAT  HL PSSS Y+   +  Q L LRSPSRRT+   A +QS+ RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDP SLKW+VQAELVH RFA
Subjt:  MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLI-AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFA

Query:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI
        MLGVSG+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AF+GLEPGYPGGPLLNPLG+AKDI
Subjt:  MLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDI

Query:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        KNAH+WKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH TII TLSSSSP
Subjt:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic4.1e-5147.06Show/hide
Query:  SRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFAN
        +R    +  A    R  W PG  PPP LDG+L GDFGFDPLGL  DP+SL+W  QAELVHCR+AMLG +G+ + +LL   GI   P WY AG  EY F +
Subjt:  SRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFAN

Query:  KRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGP
          TLFIV+L+L+G+ E +R+ D   PG    +  F        G + GYPGG   +PLG          + + KEIKNGRLAM+A++G + Q   T TGP
Subjt:  KRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGP

Query:  IDNLVEHLSNPWHKTIIQTLS
        IDNL  HL++P H TI    S
Subjt:  IDNLVEHLSNPWHKTIIQTLS

P27521 Chlorophyll a-b binding protein 4, chloroplastic1.3e-5245.06Show/hide
Query:  HPSSSSYTPLFNPSQFL-----RLRSPSRRTLLIAHAQSE------HRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLG
        H S+S + P  +  +FL     RL      T + + A++        +  WLPGL  P +L G+LAGD GFDPLGL EDP++LKW+VQAELV+ R+AMLG
Subjt:  HPSSSSYTPLFNPSQFL-----RLRSPSRRTLLIAHAQSE------HRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLG

Query:  VSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNA
        V+G+LL ++    GI  +P WY+AG  +Y FA+  TLF+++ +L  +VE +R+ D K+PGS  Q+  F   + +    E GYPGG + NPL  A      
Subjt:  VSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNA

Query:  HDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS
         + K KE+ NGRLAM+A LG  VQ  VT  GP +NL++HLS+PWH TI+QT +
Subjt:  HDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic3.3e-10181.43Show/hide
Query:  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGF
        R TWLPGL+PPP+LDG LAGD+GFDPLGLGEDP+SLKWYVQAELVH RFAMLGV+G+L TDLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLEAA +GLEPGYPGGPLLNPLG+AKD++NAHDWKLKEIKNGRLAM+AMLG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic7.6e-5351.21Show/hide
Query:  WLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVET
        WLPGL  P +L G+L GD GFDPLGL EDP++L+W+VQAELV+ R+AMLGV+G+LL ++    GI  +P WY AG  EY FA+  TLF+++ +L  +VE 
Subjt:  WLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVET

Query:  KRYMDFKSPGSQAQEGTF--FGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTI
        +R+ D K+PGS  Q+  F  + L A     E GYPGG + NPL  A  +    + K KEI NGRLAM+A LG  +Q  VT  GP DNL++H+S+PWH TI
Subjt:  KRYMDFKSPGSQAQEGTF--FGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTI

Query:  IQTLSSS
        +QTL  +
Subjt:  IQTLSSS

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic4.1e-5149.28Show/hide
Query:  AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIV
        A A    R  W PG  PP  LDG+L GDFGFDPLGL  DP SLKW VQAE+VHCR+AMLG +G+ + + L   GI   P WY AG  EY F +K TLF+V
Subjt:  AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIV

Query:  QLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEH
        +L+L+G+ E +R+ D   PGS   +  F        G + GYPGG   +PLG          + + KEIKNGRLAM+A++G + Q   T TGPIDNL  H
Subjt:  QLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEH

Query:  LSNPWHKTI
        L++P H TI
Subjt:  LSNPWHKTI

Arabidopsis top hitse value%identityAlignment
AT1G45474.1 photosystem I light harvesting complex gene 52.4e-10281.43Show/hide
Query:  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGF
        R TWLPGL+PPP+LDG LAGD+GFDPLGLGEDP+SLKWYVQAELVH RFAMLGV+G+L TDLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLEAA +GLEPGYPGGPLLNPLG+AKD++NAHDWKLKEIKNGRLAM+AMLG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

AT1G45474.2 photosystem I light harvesting complex gene 52.4e-10281.43Show/hide
Query:  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGF
        R TWLPGL+PPP+LDG LAGD+GFDPLGLGEDP+SLKWYVQAELVH RFAMLGV+G+L TDLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLEAA +GLEPGYPGGPLLNPLG+AKD++NAHDWKLKEIKNGRLAM+AMLG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

AT1G61520.1 photosystem I light harvesting complex gene 33.9e-4440.44Show/hide
Query:  QSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSL------KWYVQAELVHCRFAMLGVSGVLLTDLLRVTGI----SELPVWYNAGAVEYG---
        Q  +R  W        +LDG+L GD+GFDPLGL  DP+        +W    E+++ RFAMLG +G +  ++L   G+    + LP W+  G +      
Subjt:  QSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSL------KWYVQAELVHCRFAMLGVSGVLLTDLLRVTGI----SELPVWYNAGAVEYG---

Query:  --FANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGL-EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYV
          +A+  TLF++++ LMGF E +R  D+ +PGS  ++  F GLE    G   P YPGGP  NPLG  KD K+  + KLKE+KNGRLAM+A+LG F+Q  V
Subjt:  --FANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGL-EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYV

Query:  THTGPIDNLVEHLSNPWHKTIIQTL
        T  GP  NL++HL++P +  ++ +L
Subjt:  THTGPIDNLVEHLSNPWHKTIIQTL

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A49.2e-5445.06Show/hide
Query:  HPSSSSYTPLFNPSQFL-----RLRSPSRRTLLIAHAQSE------HRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLG
        H S+S + P  +  +FL     RL      T + + A++        +  WLPGL  P +L G+LAGD GFDPLGL EDP++LKW+VQAELV+ R+AMLG
Subjt:  HPSSSSYTPLFNPSQFL-----RLRSPSRRTLLIAHAQSE------HRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLG

Query:  VSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNA
        V+G+LL ++    GI  +P WY+AG  +Y FA+  TLF+++ +L  +VE +R+ D K+PGS  Q+  F   + +    E GYPGG + NPL  A      
Subjt:  VSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNA

Query:  HDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS
         + K KE+ NGRLAM+A LG  VQ  VT  GP +NL++HLS+PWH TI+QT +
Subjt:  HDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS

AT3G61470.1 photosystem I light harvesting complex gene 22.9e-5249.28Show/hide
Query:  AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIV
        A A    R  W PG  PP  LDG+L GDFGFDPLGL  DP SLKW VQAE+VHCR+AMLG +G+ + + L   GI   P WY AG  EY F +K TLF+V
Subjt:  AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIV

Query:  QLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEH
        +L+L+G+ E +R+ D   PGS   +  F        G + GYPGG   +PLG          + + KEIKNGRLAM+A++G + Q   T TGPIDNL  H
Subjt:  QLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEH

Query:  LSNPWHKTI
        L++P H TI
Subjt:  LSNPWHKTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCATTTTCAGCAGCCACTGCCTTACATCTCCACCCTTCTTCTTCATCTTACACTCCCTTATTCAACCCTAGCCAGTTCCTCCGCCTCCGATCCCCTTCCCG
CCGCACACTATTAATAGCTCATGCCCAATCGGAGCACCGTCAAACATGGCTTCCCGGCCTCGACCCGCCACCGCATCTCGACGGAACCCTTGCTGGGGATTTTGGATTCG
ACCCACTTGGGCTTGGCGAGGACCCACAAAGCTTGAAGTGGTACGTTCAAGCAGAGCTTGTTCATTGCCGCTTTGCCATGCTCGGCGTTTCTGGAGTTCTTCTCACTGAT
TTGCTTCGTGTTACAGGGATCAGTGAATTGCCAGTTTGGTATAATGCCGGTGCCGTTGAATATGGTTTTGCCAACAAACGAACTCTTTTCATTGTTCAGCTGCTTTTGAT
GGGGTTTGTGGAAACTAAAAGGTATATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAAGCTGCCTTTAAAGGTCTCGAGCCCGGAT
ACCCTGGGGGTCCTCTGTTGAATCCTCTTGGCATTGCTAAAGATATCAAGAATGCTCATGACTGGAAACTCAAGGAGATTAAGAATGGACGGCTTGCAATGGTAGCCATG
CTTGGGATCTTTGTGCAAGCTTATGTTACTCATACAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACACTTTCAAGCTC
AAGTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTTCATTTTCAGCAGCCACTGCCTTACATCTCCACCCTTCTTCTTCATCTTACACTCCCTTATTCAACCCTAGCCAGTTCCTCCGCCTCCGATCCCCTTCCCG
CCGCACACTATTAATAGCTCATGCCCAATCGGAGCACCGTCAAACATGGCTTCCCGGCCTCGACCCGCCACCGCATCTCGACGGAACCCTTGCTGGGGATTTTGGATTCG
ACCCACTTGGGCTTGGCGAGGACCCACAAAGCTTGAAGTGGTACGTTCAAGCAGAGCTTGTTCATTGCCGCTTTGCCATGCTCGGCGTTTCTGGAGTTCTTCTCACTGAT
TTGCTTCGTGTTACAGGGATCAGTGAATTGCCAGTTTGGTATAATGCCGGTGCCGTTGAATATGGTTTTGCCAACAAACGAACTCTTTTCATTGTTCAGCTGCTTTTGAT
GGGGTTTGTGGAAACTAAAAGGTATATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAAGCTGCCTTTAAAGGTCTCGAGCCCGGAT
ACCCTGGGGGTCCTCTGTTGAATCCTCTTGGCATTGCTAAAGATATCAAGAATGCTCATGACTGGAAACTCAAGGAGATTAAGAATGGACGGCTTGCAATGGTAGCCATG
CTTGGGATCTTTGTGCAAGCTTATGTTACTCATACAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACACTTTCAAGCTC
AAGTCCTTAA
Protein sequenceShow/hide protein sequence
MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTD
LLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAM
LGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP