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Cucsat.G4621 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4621
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionXylanolytic transcriptional activator xlnR like
Genome locationctg1227:840966..844547
RNA-Seq ExpressionCucsat.G4621
SyntenyCucsat.G4621
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039632 - Transmembrane protein 42


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598488.1 hypothetical protein SDJN03_08266, partial [Cucurbita argyrosperma subsp. sororia]4.23e-6290.27Show/hide
Query:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLI
        +G KGY+WAISAGLNAAFAAIAAKLFS TLIRY LVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEE LSF+WFVGA+LI++GVLI
Subjt:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLI

Query:  LNKSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNKSSIEKKESKD

XP_004152660.1 uncharacterized protein LOC101208185 [Cucumis sativus]6.40e-70100Show/hide
Query:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVL
        MEGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVL
Subjt:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVL

Query:  ILNKSSIEKKESKD
        ILNKSSIEKKESKD
Subjt:  ILNKSSIEKKESKD

XP_008444781.1 PREDICTED: multidrug resistance protein EbrB [Cucumis melo]2.41e-6593.86Show/hide
Query:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVL
        MEGSKGYVWAISAGLNAA +AIAAKLFSYT  RY LVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSF+WFVGA+LIVIGVL
Subjt:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVL

Query:  ILNKSSIEKKESKD
        ILNKSSIEKKESKD
Subjt:  ILNKSSIEKKESKD

XP_022961823.1 uncharacterized protein LOC111462473 [Cucurbita moschata]2.98e-6291.15Show/hide
Query:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLI
        +G KGY+WAISAGLNAAFAAIAAKLFS TLIRY LVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEE LSF+WFVGA+LIV+GVLI
Subjt:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLI

Query:  LNKSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNKSSIEKKESKD

XP_022997366.1 uncharacterized protein LOC111492304 [Cucurbita maxima]5.15e-6392.04Show/hide
Query:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLI
        +G KGY+WAISAGLNAAFAAIAAKLFS TLIRY LVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSF+WFVGA+LIV+GVLI
Subjt:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLI

Query:  LNKSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNKSSIEKKESKD

TrEMBL top hitse value%identityAlignment
A0A0A0LPF1 Uncharacterized protein3.10e-70100Show/hide
Query:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVL
        MEGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVL
Subjt:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVL

Query:  ILNKSSIEKKESKD
        ILNKSSIEKKESKD
Subjt:  ILNKSSIEKKESKD

A0A1S3BB59 multidrug resistance protein EbrB1.17e-6593.86Show/hide
Query:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVL
        MEGSKGYVWAISAGLNAA +AIAAKLFSYT  RY LVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSF+WFVGA+LIVIGVL
Subjt:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVL

Query:  ILNKSSIEKKESKD
        ILNKSSIEKKESKD
Subjt:  ILNKSSIEKKESKD

A0A6J1CSW2 uncharacterized protein LOC1110139162.39e-6190.27Show/hide
Query:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLI
        +G KGYVWAISAG NAA AAIAAKLFS TLIR+ LVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSF+WFVGALLIVIGVLI
Subjt:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLI

Query:  LNKSSIEKKESKD
        LNKSSIEKKE+KD
Subjt:  LNKSSIEKKESKD

A0A6J1HCY1 uncharacterized protein LOC1114624731.44e-6291.15Show/hide
Query:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLI
        +G KGY+WAISAGLNAAFAAIAAKLFS TLIRY LVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEE LSF+WFVGA+LIV+GVLI
Subjt:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLI

Query:  LNKSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNKSSIEKKESKD

A0A6J1K7A2 uncharacterized protein LOC1114923042.49e-6392.04Show/hide
Query:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLI
        +G KGY+WAISAGLNAAFAAIAAKLFS TLIRY LVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSF+WFVGA+LIV+GVLI
Subjt:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLI

Query:  LNKSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNKSSIEKKESKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30845.1 unknown protein9.3e-3567.27Show/hide
Query:  KGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLILNK
        +GY+ A++AGLNAA AAI+AK F+  +I+Y LV+  N+ MW CYVNSL+ALSSLQAT TNF+ANFL SGLAG FLF+E+LSFRWF GAL I  GVLIL+K
Subjt:  KGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLILNK

Query:  SSIEKKESKD
        SS++KK S D
Subjt:  SSIEKKESKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGGAGTAAGGGTTACGTGTGGGCAATTTCAGCCGGTCTCAACGCTGCTTTTGCCGCCATTGCAGCCAAGCTTTTCTCCTATACGTTAATTAGGTATGTTCTGGT
AATTGCGTTCAACTTGGCAATGTGGGGATGTTATGTCAATAGCTTAAAAGCTCTCTCGTCATTACAAGCTACAGGGACAAACTTTTCAGCTAACTTTCTTTGTTCTGGTC
TAGCCGGTTTCTTTTTGTTCGAAGAAGCATTATCATTTCGGTGGTTTGTAGGTGCGTTATTGATTGTCATCGGCGTGCTGATTTTGAATAAATCGAGCATTGAGAAGAAG
GAAAGCAAGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGGAGTAAGGGTTACGTGTGGGCAATTTCAGCCGGTCTCAACGCTGCTTTTGCCGCCATTGCAGCCAAGCTTTTCTCCTATACGTTAATTAGGTATGTTCTGGT
AATTGCGTTCAACTTGGCAATGTGGGGATGTTATGTCAATAGCTTAAAAGCTCTCTCGTCATTACAAGCTACAGGGACAAACTTTTCAGCTAACTTTCTTTGTTCTGGTC
TAGCCGGTTTCTTTTTGTTCGAAGAAGCATTATCATTTCGGTGGTTTGTAGGTGCGTTATTGATTGTCATCGGCGTGCTGATTTTGAATAAATCGAGCATTGAGAAGAAG
GAAAGCAAGGACTGA
Protein sequenceShow/hide protein sequence
MEGSKGYVWAISAGLNAAFAAIAAKLFSYTLIRYVLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEALSFRWFVGALLIVIGVLILNKSSIEKK
ESKD