; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G4707 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4707
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionAminoacyl-tRNA hydrolase
Genome locationctg1227:2270292..2272578
RNA-Seq ExpressionCucsat.G4707
SyntenyCucsat.G4707
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445082.1 PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 [Cucumis melo]2.29e-11794.09Show/hide
Query:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSS-LSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVT
        MTCVIS+SRFTLSISKSI LC CPRSRVFPSSS LSLHSSIRK+HPFCSASMSQS ETNSVSTPDDAG +AEETP DVLIQYVVLRRDLIDSWPLGSVVT
Subjt:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSS-LSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVT

Query:  QGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFF
        QGCHASVSAIWL KDDPHTSDYCNP NIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFF
Subjt:  QGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFF

XP_011649759.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucumis sativus]1.28e-131100Show/hide
Query:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ
        MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
        GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
Subjt:  GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL

XP_023546189.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita pepo subsp. pepo]2.86e-10581Show/hide
Query:  CATSCEDIMTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSW
        CAT CEDIM  VISAS FT SISKS  LCSC RSRV+PSSSLSL S  R ++ F SASMS+S E+NS   PDD   K     ADVLIQYVVLRRDLIDSW
Subjt:  CATSCEDIMTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSW

Query:  PLGSVVTQGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        PLGSVVTQGCHASVSA+WLNKDDPHTS+YC+PHNIDSMHKVTLEVKGETQ+VNLSEKLKA+SI HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKLCK
Subjt:  PLGSVVTQGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

XP_031736857.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucumis sativus]1.89e-131100Show/hide
Query:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ
        MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
        GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
Subjt:  GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL

XP_038884124.1 putative peptidyl-tRNA hydrolase PTRHD1 [Benincasa hispida]5.00e-11187.5Show/hide
Query:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ
        MTCVISASRF  SISKS  LCSC   RV PSSSLSL S  R ++PF SASMSQS ETNSV  PDD GAKAEE  ADVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        GCHASVSAIWLNKDDPHTSDYC+PHNIDSMHKVTLEVKGETQ+VNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS+VSPFFKKLKLCK
Subjt:  GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

TrEMBL top hitse value%identityAlignment
A0A0A0LLQ2 Aminoacyl-tRNA hydrolase6.91e-134100Show/hide
Query:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ
        MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
Subjt:  GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A1S4DVS0 Aminoacyl-tRNA hydrolase1.11e-11794.09Show/hide
Query:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSS-LSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVT
        MTCVIS+SRFTLSISKSI LC CPRSRVFPSSS LSLHSSIRK+HPFCSASMSQS ETNSVSTPDDAG +AEETP DVLIQYVVLRRDLIDSWPLGSVVT
Subjt:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSS-LSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVT

Query:  QGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFF
        QGCHASVSAIWL KDDPHTSDYCNP NIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFF
Subjt:  QGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFF

A0A6J1HBR1 Aminoacyl-tRNA hydrolase5.81e-10080.95Show/hide
Query:  VISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQGCH
        VISASRFT SISKS  LCSC RSRV+PSSSLSL S  R ++ F S SMS+S E+NS   PDD+  K     ADVLIQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  VISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        ASVSA+WLNKDDPHT +YC+PHNIDSMHKVTLEVKGETQ+VNLSEKL+ANSI HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKLCK
Subjt:  ASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A6J1K304 Aminoacyl-tRNA hydrolase1.01e-10082.54Show/hide
Query:  VISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQGCH
        VISASRFT SISKS  LCSC RSRV+PSSSLSL S  R ++ F SASMS+S E+NS   PDD   KA    ADVLIQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  VISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        ASVSAIWLNKDDP TS+YC+PHNIDSMHKVTLEVKGETQ+VNLSEKLK NSI HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKLCK
Subjt:  ASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase6.38e-9579.17Show/hide
Query:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ
        M  VISASRFT SIS S  LCS   +RV+  SS+ L S    +  F SASMS+S E+NSV   DD GAKAEE  ADVL+QYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        GCHASVSAIWLNKDDPHTS+YC+P NIDSMHKVTLEVKGETQ+VNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKLCK
Subjt:  GCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD17.9e-2647.9Show/hide
Query:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLAT
        +L+QY+VLR+DL     SWP G++V Q CHA+ +A+ L++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSPFFKKLKLCK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSPFFKKLKLCK

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD18.5e-2850.42Show/hide
Query:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLAT
        +L+QY+VLR+DL     SWP G+VV Q CHA+ +A+ L++D PHT+ Y     ++ M KV LE   ET +  L+E L+  +I HKLW+EQPENIPTC+A 
Subjt:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSPFFKKLKLCK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSPFFKKLKLCK

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD16.7e-2547.06Show/hide
Query:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLAT
        VL+QY+VLR+DL     SWP G++V Q CHA+ +A+  ++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSPFFKKLKLCK
        +PYPK  V  + KK +L K
Subjt:  KPYPKSVVSPFFKKLKLCK

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein2.0e-5662.89Show/hide
Query:  TCVISAS-RFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTH--PFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVV
        T V+SA+ RF + +++ +S    PR R +       HS+IR  H   F +AS S S +T  +    D  A + E P DV++QYVVLRRDLIDSWPLGSVV
Subjt:  TCVISAS-RFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTH--PFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVV

Query:  TQGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        TQGCHASV+AIW  KDDP T  YC+P +IDSMHKVTLEVKGETQM+NLSEKLK   I HKLW+EQPENIPTC+ATKPYPKS VS FFKKLKLCK
Subjt:  TQGCHASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTGCTACTTCGTGTGAAGATATCATGACTTGTGTAATTTCAGCTTCTCGATTCACACTCTCCATTTCCAAATCCATCAGCCTCTGCTCATGTCCAAGGTCTAGGGTTTT
CCCATCTTCTTCTCTTTCTCTCCACTCTTCCATTCGGAAAACCCATCCATTTTGCTCCGCCTCCATGAGTCAATCTGTTGAAACTAATTCAGTTTCTACACCGGACGACG
CCGGAGCAAAGGCGGAGGAGACACCCGCCGACGTTTTGATTCAGTACGTGGTGCTTCGGAGAGATCTGATTGATTCCTGGCCGCTTGGTAGCGTCGTAACTCAGGGATGC
CATGCTTCTGTCTCTGCCATTTGGTTGAATAAAGATGATCCCCACACTTCCGACTACTGTAATCCACATAATATCGATTCTATGCATAAGGTTACTCTTGAAGTGAAAGG
AGAAACTCAAATGGTTAACTTATCAGAGAAACTCAAAGCGAACTCAATCGTTCATAAACTATGGATAGAACAACCAGAAAACATTCCAACATGTCTTGCTACAAAACCCT
ACCCCAAATCTGTGGTATCGCCATTTTTTAAAAAGCTAAAACTCTGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
TGTGCTACTTCGTGTGAAGATATCATGACTTGTGTAATTTCAGCTTCTCGATTCACACTCTCCATTTCCAAATCCATCAGCCTCTGCTCATGTCCAAGGTCTAGGGTTTT
CCCATCTTCTTCTCTTTCTCTCCACTCTTCCATTCGGAAAACCCATCCATTTTGCTCCGCCTCCATGAGTCAATCTGTTGAAACTAATTCAGTTTCTACACCGGACGACG
CCGGAGCAAAGGCGGAGGAGACACCCGCCGACGTTTTGATTCAGTACGTGGTGCTTCGGAGAGATCTGATTGATTCCTGGCCGCTTGGTAGCGTCGTAACTCAGGGATGC
CATGCTTCTGTCTCTGCCATTTGGTTGAATAAAGATGATCCCCACACTTCCGACTACTGTAATCCACATAATATCGATTCTATGCATAAGGTTACTCTTGAAGTGAAAGG
AGAAACTCAAATGGTTAACTTATCAGAGAAACTCAAAGCGAACTCAATCGTTCATAAACTATGGATAGAACAACCAGAAAACATTCCAACATGTCTTGCTACAAAACCCT
ACCCCAAATCTGTGGTATCGCCATTTTTTAAAAAGCTAAAACTCTGTAAGTGA
Protein sequenceShow/hide protein sequence
CATSCEDIMTCVISASRFTLSISKSISLCSCPRSRVFPSSSLSLHSSIRKTHPFCSASMSQSVETNSVSTPDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQGC
HASVSAIWLNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK