; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G4735 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4735
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRan BP2/NZF zinc finger-like superfamily protein
Genome locationctg1227:2653136..2654373
RNA-Seq ExpressionCucsat.G4735
SyntenyCucsat.G4735
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064949.1 putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa]3.09e-8499.15Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP
        MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNF+SRSICFKCGATKDETSAAAYDGDLP
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP

Query:  RMRGFNFGGASNRPGWKS
        RMRGFNFGGASNRPGWKS
Subjt:  RMRGFNFGGASNRPGWKS
XP_004138734.1 uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus]1.41e-91100Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP
        MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP

Query:  RMRGFNFGGASNRPGWKSGDWICAR
        RMRGFNFGGASNRPGWKSGDWICAR
Subjt:  RMRGFNFGGASNRPGWKSGDWICAR
XP_023002539.1 uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita maxima]1.13e-8393.6Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP
        MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGGG YGGGR GGSSSFGFTTGPDVRPGDWYC VANCGAHNFASRSICFKCGA+KDE SAAAYDGDL 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP

Query:  RMRGFNFGGASNRPGWKSGDWICAR
        R+RGFNFGGASNRPGWKSGDWICAR
Subjt:  RMRGFNFGGASNRPGWKSGDWICAR
XP_023538151.1 uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita pepo subsp. pepo]6.54e-8392.8Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP
        MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGG +YGGGR GGSSSFGFTTGPDVRPGDWYC VANCGAHNFASRSICFKCGA+KDE SAAAYDGDL 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP

Query:  RMRGFNFGGASNRPGWKSGDWICAR
        R+RGFNFGGASNRPGWKSGDWICAR
Subjt:  RMRGFNFGGASNRPGWKSGDWICAR
XP_038884423.1 uncharacterized RNA-binding protein C17H9.04c-like [Benincasa hispida]2.03e-8494.4Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP
        MSRPGDWNCRSCNHLNFQRRDSCQRCG+PRADF GGSYG GRV GSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGA+KDETSAAAYDGDL 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP

Query:  RMRGFNFGGASNRPGWKSGDWICAR
        RMRGFNFGGASNRPGWKSGDWIC R
Subjt:  RMRGFNFGGASNRPGWKSGDWICAR
TrEMBL top hitse value%identityAlignment
A0A0A0LLW7 Uncharacterized protein7.42e-14499.49Show/hide
Query:  RQSQKPRFILLDFRDKKEKKRKEKTKIQVLHRYKNHHHRLIHQRNVIKPLQTKPPSPSTSRTSKKEKKKINNRMSRPGDWNCRSCNHLNFQRRDSCQRCG
        +QSQKPRFILLDFRDKKEKKRKEKTKIQVLHRYKNHHHRLIHQRNVIKPLQTKPPSPSTSRTSKKEKKKINNRMSRPGDWNCRSCNHLNFQRRDSCQRCG
Subjt:  RQSQKPRFILLDFRDKKEKKRKEKTKIQVLHRYKNHHHRLIHQRNVIKPLQTKPPSPSTSRTSKKEKKKINNRMSRPGDWNCRSCNHLNFQRRDSCQRCG

Query:  DPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLPRMRGFNFGGASNRPGWKSGDWICAR
        DPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLPRMRGFNFGGASNRPGWKSGDWICAR
Subjt:  DPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLPRMRGFNFGGASNRPGWKSGDWICAR
A0A1S3BBL4 uncharacterized RNA-binding protein C17H9.04c6.85e-92100Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP
        MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP

Query:  RMRGFNFGGASNRPGWKSGDWICAR
        RMRGFNFGGASNRPGWKSGDWICAR
Subjt:  RMRGFNFGGASNRPGWKSGDWICAR
A0A5A7VHK5 Putative RNA-binding protein C17H9.04c1.49e-8499.15Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP
        MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNF+SRSICFKCGATKDETSAAAYDGDLP
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP

Query:  RMRGFNFGGASNRPGWKS
        RMRGFNFGGASNRPGWKS
Subjt:  RMRGFNFGGASNRPGWKS
A0A6J1GJE4 TATA-binding protein-associated factor 2N-like7.42e-8292Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP
        MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGG  YGGGR GGSSSFGFTTGPDVRPGDWYC VANCGAHNFASRSICFKCGA+KDE SAAAYDGDL 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP

Query:  RMRGFNFGGASNRPGWKSGDWICAR
        R+RGFNFGGASN PGWKSGDWICAR
Subjt:  RMRGFNFGGASNRPGWKSGDWICAR
A0A6J1KQR0 uncharacterized RNA-binding protein C17H9.04c-like5.49e-8493.6Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP
        MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGGG YGGGR GGSSSFGFTTGPDVRPGDWYC VANCGAHNFASRSICFKCGA+KDE SAAAYDGDL 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLP

Query:  RMRGFNFGGASNRPGWKSGDWICAR
        R+RGFNFGGASNRPGWKSGDWICAR
Subjt:  RMRGFNFGGASNRPGWKSGDWICAR
SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c3.1e-0931.45Show/hide
Query:  RPGDWNCRSCNHLNFQRRDSCQRCGDP--------------RADFG-GGSYGGG------RVGGS--------------------------SSFGFTTGP
        RPGDWNC  C   NFQRR SC RC  P                DF  G SYG G        GGS                          SS  F    
Subjt:  RPGDWNCRSCNHLNFQRRDSCQRCGDP--------------RADFG-GGSYGGG------RVGGS--------------------------SSFGFTTGP

Query:  DVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLPRMRGFNFGGASNRP
          R GDW C    CG HNFA    C +CGA++   +  A     P    ++    S+ P
Subjt:  DVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLPRMRGFNFGGASNRP
P56959 RNA-binding protein FUS5.1e-0433.33Show/hide
Query:  RADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAA---------YDGDLPRMRGFNFGGASNRPGWKSG
        R  +GGG  GGG  GG  S G   G   R GDW C    C   NF+ R+ C +C A K +              Y  D     G++ GG   R G + G
Subjt:  RADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAA---------YDGDLPRMRGFNFGGASNRPGWKSG
Q27294 RNA-binding protein cabeza3.5e-0544.26Show/hide
Query:  NRMSRPGDWNCRSCNHLNFQRRDSCQRCGDPRAD---FGGGSYGGGRVGGSSSFGFTTGPD
        N   R GDW C SCN+ NF  R+ C RC  P+ D     GG  GGG  GG    G+  G D
Subjt:  NRMSRPGDWNCRSCNHLNFQRRDSCQRCGDPRAD---FGGGSYGGGRVGGSSSFGFTTGPD
Arabidopsis top hitse value%identityAlignment
AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein2.1e-0525.89Show/hide
Query:  STSRTSKKEKKKINNRMSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCG
        S  R  + ++++ ++   + GDW C++CN LNF +   C RC D                        T   + PG+W C   +C   NF   SIC KC 
Subjt:  STSRTSKKEKKKINNRMSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCG

Query:  ATKDETSAAAYD
          + + +    D
Subjt:  ATKDETSAAAYD
AT2G17975.1 zinc finger (Ran-binding) family protein4.1e-0931.76Show/hide
Query:  RPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPD----VRPGDWYCTVANCGAHNFASRSICFKCGATKD--ETSAAAYD
        R GDW C  C + N+  R  C RC  PR                      T P+     R GDW CT   C  +N+ASR  C KCG +K+    SA A  
Subjt:  RPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPD----VRPGDWYCTVANCGAHNFASRSICFKCGATKD--ETSAAAYD

Query:  G-----------------DLPRMRGFNFGGASNRPG----WKSGDWIC
        G                 D P      F  A+N+      W+SGDWIC
Subjt:  G-----------------DLPRMRGFNFGGASNRPG----WKSGDWIC
AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein5.0e-2342.15Show/hide
Query:  GDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLPRMRG
        GDW C +C H NF++R+SCQ+CG P+       +GG  V    S       +V  GDWYC   NCG+HN+ASR+ C++CG  K E +   Y     +M  
Subjt:  GDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLPRMRG

Query:  FNFGGASNRPGWKSGDWICAR
        +   GA+  PGWK+GDW+C R
Subjt:  FNFGGASNRPGWKSGDWICAR
AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein3.3e-4364.49Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GSYGGGRVGG--SSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSA-----
        MSRPGDWNCRSC+HLNFQRRDSCQRCGD R+  GG G    G  GG   S+FGFTTG DVRPGDWYCTV NCG HNFASRS CFKCG  KDET A     
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GSYGGGRVGG--SSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSA-----

Query:  -----AAYDGDLPRMRGFNFGGASNRPGWKSGDWICAR
             A +D D+ R R    GG   R  WKSGDWIC R
Subjt:  -----AAYDGDLPRMRGFNFGGASNRPGWKSGDWICAR
AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein4.5e-4060Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG------GSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDE---TS
        M+RPGDWNCR C+HLNFQRRDSCQRC +PR   GG        +GG  V  SSSFGF TGPDVRPGDWYC + +CG HNFA+RS CFKCGA KDE   +S
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG------GSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDE---TS

Query:  AAAYDGDL-----PRMRGFNFGGASN------RPGWKSGDWICAR
        AAA  G +     PR   F FGG+S+      R  WKSGDWIC R
Subjt:  AAAYDGDL-----PRMRGFNFGGASN------RPGWKSGDWICAR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGTAAGCGAAAGGCAAAGCCAAAAACCTCGTTTTATTCTTCTCGATTTTCGAGATAAAAAAGAAAAGAAAAGAAAAGAAAAAACAAAAATCCAAGTTCTTCACCGGTA
TAAAAACCACCACCACCGGCTAATTCACCAGAGAAACGTGATCAAGCCATTACAAACCAAACCGCCATCACCTTCAACTTCACGCACAAGCAAAAAGGAAAAGAAAAAGA
TCAACAACAGGATGAGTCGGCCGGGCGATTGGAATTGCAGGTCTTGCAACCATCTCAACTTTCAACGGAGAGATTCGTGTCAACGATGTGGAGACCCTAGGGCCGACTTC
GGCGGCGGAAGCTACGGCGGTGGAAGAGTTGGTGGTTCTTCATCCTTCGGTTTCACCACCGGCCCCGACGTCCGCCCTGGGGATTGGTACTGCACCGTCGCTAACTGTGG
CGCTCATAACTTCGCTAGCCGCTCTATCTGTTTTAAGTGCGGCGCCACCAAGGATGAAACTTCCGCCGCCGCTTACGACGGCGATTTGCCCAGAATGAGAGGCTTTAACT
TCGGCGGTGCCTCCAACCGTCCTGGATGGAAATCTGGTGATTGGATCTGTGCCAGGTAG
mRNA sequenceShow/hide mRNA sequence
TTGGTAAGCGAAAGGCAAAGCCAAAAACCTCGTTTTATTCTTCTCGATTTTCGAGATAAAAAAGAAAAGAAAAGAAAAGAAAAAACAAAAATCCAAGTTCTTCACCGGTA
TAAAAACCACCACCACCGGCTAATTCACCAGAGAAACGTGATCAAGCCATTACAAACCAAACCGCCATCACCTTCAACTTCACGCACAAGCAAAAAGGAAAAGAAAAAGA
TCAACAACAGGATGAGTCGGCCGGGCGATTGGAATTGCAGGTCTTGCAACCATCTCAACTTTCAACGGAGAGATTCGTGTCAACGATGTGGAGACCCTAGGGCCGACTTC
GGCGGCGGAAGCTACGGCGGTGGAAGAGTTGGTGGTTCTTCATCCTTCGGTTTCACCACCGGCCCCGACGTCCGCCCTGGGGATTGGTACTGCACCGTCGCTAACTGTGG
CGCTCATAACTTCGCTAGCCGCTCTATCTGTTTTAAGTGCGGCGCCACCAAGGATGAAACTTCCGCCGCCGCTTACGACGGCGATTTGCCCAGAATGAGAGGCTTTAACT
TCGGCGGTGCCTCCAACCGTCCTGGATGGAAATCTGGTGATTGGATCTGTGCCAGGTAG
Protein sequenceShow/hide protein sequence
LVSERQSQKPRFILLDFRDKKEKKRKEKTKIQVLHRYKNHHHRLIHQRNVIKPLQTKPPSPSTSRTSKKEKKKINNRMSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADF
GGGSYGGGRVGGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLPRMRGFNFGGASNRPGWKSGDWICAR