; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G4769 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4769
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionTranscription initiation factor TFIID subunit 10
Genome locationctg1227:3202234..3205874
RNA-Seq ExpressionCucsat.G4769
SyntenyCucsat.G4769
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0006413 - translational initiation (biological process)
GO:0016573 - histone acetylation (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
GO:1990841 - promoter-specific chromatin binding (molecular function)
InterPro domainsIPR003923 - Transcription initiation factor TFIID, 23-30kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138687.1 transcription initiation factor TFIID subunit 10 [Cucumis sativus]1.09e-8598.53Show/hide
Query:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL  LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_008445293.1 PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis melo]2.57e-8497.06Show/hide
Query:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL  LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_022962589.1 transcription initiation factor TFIID subunit 10 [Cucurbita moschata]6.30e-8597.79Show/hide
Query:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL  LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_038886703.1 transcription initiation factor TFIID subunit 10 isoform X1 [Benincasa hispida]9.16e-8992.26Show/hide
Query:  TSLISKRGKNITEKKSKKKMNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQA
        T LISKRGK      +KKKMNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL  LVAVATQKFVADVASDALQHCKARQA
Subjt:  TSLISKRGKNITEKKSKKKMNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQA

Query:  AVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        AVVKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  AVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_038886704.1 transcription initiation factor TFIID subunit 10 isoform X2 [Benincasa hispida]8.93e-9193.46Show/hide
Query:  TSLISKRGKNITEKKSKKKMNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLLVAVATQKFVADVASDALQHCKARQAAV
        T LISKRGK      +KKKMNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLLVAVATQKFVADVASDALQHCKARQAAV
Subjt:  TSLISKRGKNITEKKSKKKMNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLLVAVATQKFVADVASDALQHCKARQAAV

Query:  VKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        VKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  VKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

TrEMBL top hitse value%identityAlignment
A0A0A0LPV6 Transcription initiation factor TFIID subunit 105.27e-8698.53Show/hide
Query:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL  LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A1S3BD75 Transcription initiation factor TFIID subunit 101.24e-8497.06Show/hide
Query:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL  LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A6J1BVJ5 Transcription initiation factor TFIID subunit 108.04e-8192.65Show/hide
Query:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH+QQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL  LVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A6J1HHI7 Transcription initiation factor TFIID subunit 103.05e-8597.79Show/hide
Query:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL  LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A6J1KB50 Transcription initiation factor TFIID subunit 103.05e-8597.79Show/hide
Query:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL  LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

SwissProt top hitse value%identityAlignment
O04173 Transcription initiation factor TFIID subunit 104.8e-5581.62Show/hide
Query:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRL  LVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LT
Subjt:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKH EYFADSPSTG+D  +R+E
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

Q12962 Transcription initiation factor TFIID subunit 102.9e-2047.12Show/hide
Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKH
        L +FL  L +YTPTIPD +  +YL ++GF+  D R+  L+++A QKF++D+A+DALQHCK +  A    +   + KD++  LTM+DL+ AL EYG+NVK 
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q8K0H5 Transcription initiation factor TFIID subunit 102.9e-2047.12Show/hide
Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKH
        L +FL  L +YTPTIPD +  +YL ++GF+  D R+  L+++A QKF++D+A+DALQHCK +  A    +   + KD++  LTM+DL+ AL EYG+NVK 
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q9U5W9 Transcription initiation factor TFIID subunit 101.7e-1537.72Show/hide
Query:  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAV------VKDKRDKQQKDKRLILTMDDLSKA
        +++ + E +  L +Y+PTIPD L  H L  +GF   D ++  LV+V+ QKF++D+A+DALQHCK R   +         K  K  KD++  L M+DL  A
Subjt:  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAV------VKDKRDKQQKDKRLILTMDDLSKA

Query:  LREYGVNVKHQEYF
        L ++G+ ++  +YF
Subjt:  LREYGVNVKHQEYF

Q9XZT7 Transcription initiation factor TFIID subunit 10b3.9e-1738.89Show/hide
Query:  NHNQQATG------SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKAR-QAAVVKDKRDKQQKD
        +H Q + G       R    + LS+F++ L +YTP IPD +  HYL   GFQ  D R+  L+++A QK+++D+  DALQH KAR            + KD
Subjt:  NHNQQATG------SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKAR-QAAVVKDKRDKQQKD

Query:  KRLILTMDDLSKALREYGVNVKHQEY
        ++  LTM+DL  AL +YG+NV+  +Y
Subjt:  KRLILTMDDLSKALREYGVNVKHQEY

Arabidopsis top hitse value%identityAlignment
AT4G31720.1 TBP-associated factor II 153.4e-5681.62Show/hide
Query:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRL  LVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LT
Subjt:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKH EYFADSPSTG+D  +R+E
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

AT4G31720.2 TBP-associated factor II 153.4e-5681.62Show/hide
Query:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRL  LVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LT
Subjt:  MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRL--LVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKH EYFADSPSTG+D  +R+E
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGAGCTTGATTTCGAAGAGAGGGAAAAATATAACGGAGAAGAAGAGCAAGAAGAAGATGAACCATAACCAACAAGCGACAGGGAGCAGGCACGACGATGACGCAGCGCT
ATCCGAGTTCTTAGCTTCTCTAATGGAGTATACTCCCACTATTCCCGATGAGTTGGTGGAGCATTACTTAGGAAAGAGTGGATTTCAGTGTCCCGACGTTCGATTGCTTG
TCGCTGTTGCCACACAGAAGTTCGTTGCGGATGTTGCAAGTGATGCTCTCCAGCATTGTAAGGCAAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAG
GATAAGCGCTTAATATTGACTATGGATGATCTTTCAAAGGCACTTCGTGAGTATGGCGTCAATGTGAAACATCAAGAATACTTTGCTGATAGCCCTTCAACGGGAGTGGA
TTCTACTTCCAGAGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ACGAGCTTGATTTCGAAGAGAGGGAAAAATATAACGGAGAAGAAGAGCAAGAAGAAGATGAACCATAACCAACAAGCGACAGGGAGCAGGCACGACGATGACGCAGCGCT
ATCCGAGTTCTTAGCTTCTCTAATGGAGTATACTCCCACTATTCCCGATGAGTTGGTGGAGCATTACTTAGGAAAGAGTGGATTTCAGTGTCCCGACGTTCGATTGCTTG
TCGCTGTTGCCACACAGAAGTTCGTTGCGGATGTTGCAAGTGATGCTCTCCAGCATTGTAAGGCAAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAG
GATAAGCGCTTAATATTGACTATGGATGATCTTTCAAAGGCACTTCGTGAGTATGGCGTCAATGTGAAACATCAAGAATACTTTGCTGATAGCCCTTCAACGGGAGTGGA
TTCTACTTCCAGAGAGGAATGA
Protein sequenceShow/hide protein sequence
TSLISKRGKNITEKKSKKKMNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQK
DKRLILTMDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE