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Cucsat.G4778 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4778
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Genome locationctg1227:3359452..3361591
RNA-Seq ExpressionCucsat.G4778
SyntenyCucsat.G4778
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578783.1 hypothetical protein SDJN03_23231, partial [Cucurbita argyrosperma subsp. sororia]8.36e-6877.27Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        M +NPK + +KEDE+ PK PF WFSFLPKFD RLP P+NGGKKPP  V+DE  K D+ AQKPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD
        GFLILSWAWARWKERRP+RRS+DDDE+EDS D
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD

XP_004138679.1 uncharacterized protein LOC101205088 [Cucumis sativus]8.47e-93100Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
        GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS

XP_008456569.1 PREDICTED: uncharacterized protein LOC103496485 [Cucumis melo]1.79e-8796.97Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        MEDNPKFVA+KEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKK PPVVVDE+RKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD
        GFLILSWAWARWKERRPQRRSNDDDED DSSD
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD

XP_022993210.1 uncharacterized protein LOC111489298 [Cucurbita maxima]8.36e-6876.52Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        M ++PK + +KE+E+ PK PF WFSFLPKFD RLP P+NGGKKPP  V+DE  K D DAQKPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD
        GFLILSWAWARWKERRP+RRS+DDDE+EDS D
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD

XP_038886165.1 uncharacterized protein LOC120076415 [Benincasa hispida]6.12e-8288.72Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFP--WFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYA
        M +NPKF+ +KEDE++PKSPFP  WFSFLPKFDFRLPFP+NGGKKPP VVVDE RKAD+DAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAV+WQVYA
Subjt:  MEDNPKFVAVKEDENNPKSPFP--WFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYA

Query:  LGGFLILSWAWARWKERRPQRRSNDDDEDEDSS
        LGGFLILSWAWARWKERRPQRRSNDD+EDEDSS
Subjt:  LGGFLILSWAWARWKERRPQRRSNDDDEDEDSS

TrEMBL top hitse value%identityAlignment
A0A0A0LSR5 Uncharacterized protein4.10e-93100Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
        GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS

A0A1S3C3J3 uncharacterized protein LOC1034964858.65e-8896.97Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        MEDNPKFVA+KEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKK PPVVVDE+RKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD
        GFLILSWAWARWKERRPQRRSNDDDED DSSD
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD

A0A5D3CKR2 Uncharacterized protein8.65e-8896.97Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        MEDNPKFVA+KEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKK PPVVVDE+RKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD
        GFLILSWAWARWKERRPQRRSNDDDED DSSD
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD

A0A6J1FFF8 uncharacterized protein LOC1114449952.34e-6776.52Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        M +NPK + +KED  +PK PF WFSFLPKFD RLP P+NGGKKPP  V+DE  K D+ AQKPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD
        GFLILSWAWARWKERRP+RRS+DDDE+EDS D
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD

A0A6J1JVP7 uncharacterized protein LOC1114892984.05e-6876.52Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        M ++PK + +KE+E+ PK PF WFSFLPKFD RLP P+NGGKKPP  V+DE  K D DAQKPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD
        GFLILSWAWARWKERRP+RRS+DDDE+EDS D
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52230.1 unknown protein8.1e-1443.52Show/hide
Query:  KPPPVVVDESRKADNDAQKP-----EFVRF----PKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWARWKERRPQR---------RSNDD
        KPPP  +D +       ++P     E V F    PK+  P+   EAE   SG+TSN  ++WQVYALGGFL+L WAWARW ER  +             DD
Subjt:  KPPPVVVDESRKADNDAQKP-----EFVRF----PKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWARWKERRPQR---------RSNDD

Query:  DEDEDSSD
        DED+ SSD
Subjt:  DEDEDSSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACAACCCAAAATTTGTTGCCGTAAAAGAAGACGAGAACAACCCAAAATCCCCCTTTCCCTGGTTCTCTTTTCTTCCCAAGTTCGACTTCCGATTGCCTTTTCC
GGTCAACGGCGGCAAGAAACCGCCGCCTGTGGTGGTTGATGAATCTCGAAAGGCTGACAATGATGCTCAGAAGCCGGAGTTCGTGAGGTTTCCTAAAGCAGAGTTGCCCG
TCGCTTCGGTGGAGGCTGAAGCCGATGTTTCCGGGAAGACTTCCAATCCGGCGGTTGTCTGGCAGGTATATGCCCTGGGCGGATTTCTAATATTGAGTTGGGCATGGGCA
AGATGGAAGGAGAGAAGGCCCCAAAGACGTTCAAATGACGATGATGAGGACGAGGACTCCAGTGATTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACAACCCAAAATTTGTTGCCGTAAAAGAAGACGAGAACAACCCAAAATCCCCCTTTCCCTGGTTCTCTTTTCTTCCCAAGTTCGACTTCCGATTGCCTTTTCC
GGTCAACGGCGGCAAGAAACCGCCGCCTGTGGTGGTTGATGAATCTCGAAAGGCTGACAATGATGCTCAGAAGCCGGAGTTCGTGAGGTTTCCTAAAGCAGAGTTGCCCG
TCGCTTCGGTGGAGGCTGAAGCCGATGTTTCCGGGAAGACTTCCAATCCGGCGGTTGTCTGGCAGGTATATGCCCTGGGCGGATTTCTAATATTGAGTTGGGCATGGGCA
AGATGGAAGGAGAGAAGGCCCCAAAGACGTTCAAATGACGATGATGAGGACGAGGACTCCAGTGATTCCTAG
Protein sequenceShow/hide protein sequence
MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWA
RWKERRPQRRSNDDDEDEDSSDS