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Cucsat.G478 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G478
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionAlba domain-containing protein
Genome locationctg1:9508715..9509497
RNA-Seq ExpressionCucsat.G478
SyntenyCucsat.G478
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134424.1 uncharacterized protein At2g34160 [Cucumis sativus]1.19e-93100Show/hide
Query:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
Subjt:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
Subjt:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

XP_008438573.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo]9.03e-8995.3Show/hide
Query:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        MDSG VVSEA PEVKNEI+NEEE+LLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
Subjt:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK L ISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
Subjt:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

XP_022924600.1 uncharacterized protein At2g34160-like [Cucurbita moschata]2.19e-8087.92Show/hide
Query:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        M+SGMVVSEA  E+KNEIRNEEE+LLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK L ISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA TSEDS
Subjt:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

XP_022980835.1 uncharacterized protein At2g34160-like [Cucurbita maxima]1.08e-8088.59Show/hide
Query:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        M+SGMVVSEA  EVKNEIRNEEE+LLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK L ISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA TSEDS
Subjt:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

XP_038877187.1 uncharacterized protein At2g34160-like [Benincasa hispida]3.38e-8491.95Show/hide
Query:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        M+SGMVVSE  PEVKNEIR+EEE+LLV A D EVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
Subjt:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK L ISSVSLK GEN KLVMKPKIEIALVNAEKIKNISTAPTSEDS
Subjt:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

TrEMBL top hitse value%identityAlignment
A0A0A0L8F8 Alba domain-containing protein5.77e-94100Show/hide
Query:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
Subjt:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
Subjt:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

A0A1S3AXD3 uncharacterized protein At2g34160-like4.37e-8995.3Show/hide
Query:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        MDSG VVSEA PEVKNEI+NEEE+LLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
Subjt:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK L ISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
Subjt:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

A0A5D3CZ81 Alba DNA/RNA-binding protein4.37e-8995.3Show/hide
Query:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        MDSG VVSEA PEVKNEI+NEEE+LLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
Subjt:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK L ISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
Subjt:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

A0A6J1EFH1 uncharacterized protein At2g34160-like1.06e-8087.92Show/hide
Query:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        M+SGMVVSEA  E+KNEIRNEEE+LLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK L ISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA TSEDS
Subjt:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

A0A6J1IXN8 uncharacterized protein At2g34160-like5.25e-8188.59Show/hide
Query:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        M+SGMVVSEA  EVKNEIRNEEE+LLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK L ISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA TSEDS
Subjt:  AFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341602.2e-2557.28Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAP
        +K+N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ EILK NG A +KK+M S+V +K+   G+ V K KIEI LV +EK   +  A 
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAP

Query:  TSE
          E
Subjt:  TSE

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein6.1e-2656.31Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAP
        +K+N+IQVSN KKP F+Y NL+KR+++QY +VELSALGMAI TVVT+AEILK NG A +KK+M S+V +K+   G+ V K KIEI L  +EK   +  A 
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAP

Query:  TSE
          E
Subjt:  TSE

AT2G34160.1 Alba DNA/RNA-binding protein1.6e-2657.28Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAP
        +K+N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ EILK NG A +KK+M S+V +K+   G+ V K KIEI LV +EK   +  A 
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAP

Query:  TSE
          E
Subjt:  TSE

AT3G04620.1 Alba DNA/RNA-binding protein1.2e-2655.08Show/hide
Query:  ERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGKLV
        ER +V AP +      V T    K+N+IQVSN KKP F+Y NL+KR+I+Q+NEVELSALGMAI TVVTI+EILK NGLA +KK++ S+V +K+   GK+V
Subjt:  ERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGKLV

Query:  MKPKIEIALVNAEKIKNI
         K KIEI L  ++K  ++
Subjt:  MKPKIEIALVNAEKIKNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGGCATGGTCGTTTCAGAAGCCGCCCCTGAGGTCAAGAATGAAATCCGAAATGAGGAAGAAAGGCTCCTCGTCGCTGCCCCTGATAGTGAGGTTAAGGAGAT
TGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCCTTCTTTTACTACTACAATCTTTCTAAGAGGCACATTAAGCAGTACA
ATGAAGTTGAGCTTTCTGCATTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAATGGGTTGGCATTTCAAAAGAAGTTGATGATATCTTCT
GTCAGTTTGAAGAATGGGGAAAATGGCAAGCTGGTTATGAAACCTAAGATTGAGATTGCATTGGTAAACGCAGAAAAGATCAAGAACATTTCGACTGCTCCAACAAGTGA
AGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAGGCATGGTCGTTTCAGAAGCCGCCCCTGAGGTCAAGAATGAAATCCGAAATGAGGAAGAAAGGCTCCTCGTCGCTGCCCCTGATAGTGAGGTTAAGGAGAT
TGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCCTTCTTTTACTACTACAATCTTTCTAAGAGGCACATTAAGCAGTACA
ATGAAGTTGAGCTTTCTGCATTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAATGGGTTGGCATTTCAAAAGAAGTTGATGATATCTTCT
GTCAGTTTGAAGAATGGGGAAAATGGCAAGCTGGTTATGAAACCTAAGATTGAGATTGCATTGGTAAACGCAGAAAAGATCAAGAACATTTCGACTGCTCCAACAAGTGA
AGATTCTTGA
Protein sequenceShow/hide protein sequence
MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISS
VSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS