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Cucsat.G4782 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4782
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionReverse transcriptase domain-containing protein
Genome locationctg1227:3449925..3450481
RNA-Seq ExpressionCucsat.G4782
SyntenyCucsat.G4782
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0016592 - mediator complex (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044242.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]3.85e-1867.24Show/hide
Query:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGL
        + L LK+AI LFEWCSG K+NW+KS LSGVN+ DDEL   A +L CK EKLP LYLGL
Subjt:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGL

KAA0068192.1 mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucumis melo var. makuwa]1.23e-2071.93Show/hide
Query:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLG
        + L L++AIRLFEWCS QK+NWEKS LSGVN+ +D L QTAAR+GCKAE LPI+YLG
Subjt:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLG

TYJ99950.1 tryptophan--tRNA ligase [Cucumis melo var. makuwa]2.83e-1860Show/hide
Query:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGLDYYFFPSYLYEK
        + L LK+AI+LF+WC GQK+NWEKSALSGVNI +D L QTA R+ CKAE LP++ LGL    +P    EK
Subjt:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGLDYYFFPSYLYEK

TYK02777.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]1.57e-2144.53Show/hide
Query:  IRQGDPISPFLFLL----------------------------------------------------LKDAIRLFEWCSGQKINWEKSALSGVNINDDELF
        IRQGDP+SPFLFLL                                                    LKDAIRLFEWCSGQK+N EKSALSGVN+ +D+L 
Subjt:  IRQGDPISPFLFLL----------------------------------------------------LKDAIRLFEWCSGQKINWEKSALSGVNINDDELF

Query:  QTAARLGCKAEKLPILYLGLDYYFFPSY
        QTA  L CKAEKLPI+YLGL    +P +
Subjt:  QTAARLGCKAEKLPILYLGLDYYFFPSY

TYK31266.1 hypothetical protein E5676_scaffold455G005560 [Cucumis melo var. makuwa]1.24e-2277.59Show/hide
Query:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGL
        +FL LKDAIRLFEWCSGQK+NWEKSA+SGVN+  D+L QTA  LGCK EKLPI+YLGL
Subjt:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGL

TrEMBL top hitse value%identityAlignment
A0A5A7TLN3 Transposon Tf2-9 polyprotein1.87e-1867.24Show/hide
Query:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGL
        + L LK+AI LFEWCSG K+NW+KS LSGVN+ DDEL   A +L CK EKLP LYLGL
Subjt:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGL

A0A5D3BJF3 Tryptophan--tRNA ligase1.37e-1860Show/hide
Query:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGLDYYFFPSYLYEK
        + L LK+AI+LF+WC GQK+NWEKSALSGVNI +D L QTA R+ CKAE LP++ LGL    +P    EK
Subjt:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGLDYYFFPSYLYEK

A0A5D3BTI0 Transposon TX1 uncharacterized7.60e-2244.53Show/hide
Query:  IRQGDPISPFLFLL----------------------------------------------------LKDAIRLFEWCSGQKINWEKSALSGVNINDDELF
        IRQGDP+SPFLFLL                                                    LKDAIRLFEWCSGQK+N EKSALSGVN+ +D+L 
Subjt:  IRQGDPISPFLFLL----------------------------------------------------LKDAIRLFEWCSGQKINWEKSALSGVNINDDELF

Query:  QTAARLGCKAEKLPILYLGLDYYFFPSY
        QTA  L CKAEKLPI+YLGL    +P +
Subjt:  QTAARLGCKAEKLPILYLGLDYYFFPSY

A0A5D3DC06 Mediator of RNA polymerase II transcription subunit 8 isoform X25.94e-2171.93Show/hide
Query:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLG
        + L L++AIRLFEWCS QK+NWEKS LSGVN+ +D L QTAAR+GCKAE LPI+YLG
Subjt:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLG

A0A5D3E6J9 Reverse transcriptase domain-containing protein5.99e-2377.59Show/hide
Query:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGL
        +FL LKDAIRLFEWCSGQK+NWEKSA+SGVN+  D+L QTA  LGCK EKLPI+YLGL
Subjt:  LFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCCGCCAAGGGGACCCCATTTCTCCCTTTCTTTTCCTTCTATTGAAGGATGCCATTAGACTTTTTGAATGGTGTTCGGGGCAGAAGATTAATTGGGAGAAATCAGCTCT
TAGTGGTGTAAATATAAATGATGATGAATTGTTTCAAACAGCAGCCCGACTTGGTTGCAAGGCAGAAAAATTACCTATTCTCTACTTAGGTCTTGATTACTACTTTTTTC
CTTCATATCTTTATGAAAAAGATTTCCTATTTCCAAAAGAATGCCACTTTAGATATCAACACAAGAGGAGAGAGTCATCTAATTTGTTTACAATGAAGCACATAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATCCGCCAAGGGGACCCCATTTCTCCCTTTCTTTTCCTTCTATTGAAGGATGCCATTAGACTTTTTGAATGGTGTTCGGGGCAGAAGATTAATTGGGAGAAATCAGCTCT
TAGTGGTGTAAATATAAATGATGATGAATTGTTTCAAACAGCAGCCCGACTTGGTTGCAAGGCAGAAAAATTACCTATTCTCTACTTAGGTCTTGATTACTACTTTTTTC
CTTCATATCTTTATGAAAAAGATTTCCTATTTCCAAAAGAATGCCACTTTAGATATCAACACAAGAGGAGAGAGTCATCTAATTTGTTTACAATGAAGCACATAAATTAA
Protein sequenceShow/hide protein sequence
IRQGDPISPFLFLLLKDAIRLFEWCSGQKINWEKSALSGVNINDDELFQTAARLGCKAEKLPILYLGLDYYFFPSYLYEKDFLFPKECHFRYQHKRRESSNLFTMKHIN